; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0015990 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015990
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:30900054..30900608
RNA-Seq ExpressionLag0015990
SyntenyLag0015990
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_019169907.1 PREDICTED: uncharacterized protein LOC109165547 [Ipomoea nil]2.8e-4350.28Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        M  +GF   W++ I  CV +VS+++L+NGS  E   P+RGLRQGDPLSPYLF++C EGLS LL++A     I G R+A+ APPISHLFFADDSLLF KA 
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ
         +E  E++R + VYE  +G++VN+ KS I +    +N +K  +A +L V    + GKYLG PS + RNKKA+  YI  K++
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ

XP_019170410.1 PREDICTED: uncharacterized protein LOC109165884 [Ipomoea nil]5.7e-4450Show/hide
Query:  IGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKARKEE
        +GF   W+K + MCV +VS+S+LINGS  E   P+RGLRQGDPLSPYLF++C EGLS LLK+A++  +I G R+A+ AP I+HLFFADDSLLF KA  +E
Subjt:  IGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKARKEE

Query:  FDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ
           ++R +  YE  +GQ VN+ KS I F    + E +  + +IL V   Q+ GKYLG PS + RN++ + +YI  K++
Subjt:  FDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ

XP_019175839.1 PREDICTED: uncharacterized protein LOC109171159 [Ipomoea nil]2.8e-4349.44Show/hide
Query:  IGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKARKEE
        +GF   W+K + MCV +VS+S+LINGS  E   P+RGLRQGDPLSPYLF++C EGLS LLK+A++  +I G R+A+ AP I+HLFFA DSLLF KA  +E
Subjt:  IGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKARKEE

Query:  FDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ
           ++R +  YE  +GQ VN+ KS I F    + E +  +A+IL V   Q+ GKYLG P  + RN++ + +YI  K++
Subjt:  FDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ

XP_019184158.1 PREDICTED: uncharacterized protein LOC109179042 [Ipomoea nil]2.8e-4351.38Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        + ++GF   W++ + +CV SV + +LING   E   P+RGLRQGDPLSPYLF++C EGLS LL+ +     I G R+A+ AP ISHLFFADDSLLF KA 
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ
         +E  E++R + VYEA +GQ VNF+KS I+F     NE K  LA  L V    D GKYLG PS + RNKK    YI  K++
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ

XP_019198168.1 PREDICTED: uncharacterized protein LOC109191994 [Ipomoea nil]9.8e-4450.83Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        M  +GF   W++ I  CV +VS+++L+NGS  E   P+RGLRQGDPLSPYLF++C EGLS LL++A     I G R+A+ APPISHLFFADDSLLF KA 
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ
         +E  E++R + VYE  +GQ+VN+ KS I +    +N +K  +A +L V    + GKYLG PS + RNKKA+  YI  K++
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ

TrEMBL top hitse value%identityAlignment
A0A1B5Z7R2 Reverse transcriptase domain-containing protein (Fragment)2.6e-4249.44Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        M K+GFS  W+K I +CVESV +S+L+NG   E  KPSRGLRQGDPLSPYLF++C EGL++L++ A+ S +I G++I + AP ISHL FADD  LF +A 
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV
          E   M+ I+  YEAA+GQ +NF KSEI     V    +  ++  L V+ V   GKYLG PS + R+KK++ N+I  ++
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV

A0A2Z6NHQ6 Reverse transcriptase domain-containing protein6.8e-4350Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        M K+GFS  W+K I +CVESV +S+L+NG   E  KPSRGLRQGDPLSPYLF++C EGL++L++ A+ S NI G++I + AP ISHL FADD  LF +A 
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV
          E   M+ I+  YEAA+GQ +NF KSEI     V    +  ++  L V+ V   GKYLG PS + R+KK++ N+I  ++
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV

A0A5B7BN08 Reverse transcriptase domain-containing protein5.8e-4248.89Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        M ++GF   W+  I  CV +VSFS+LING      KP+RGLRQGDPLSPYLF++C E  S+LL+K++    I G+ +A+ AP +SHLFFADDSLLF  A 
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV
        + +  E+ RI+ +Y AA+GQ VNF+KS I+F A V  + +  +  IL V I   H KYLG PS++ R+K    N I  +V
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV

A0A803PY90 Uncharacterized protein4.4e-4249.44Show/hide
Query:  IGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKARKEE
        +G+   W KKI  CV SVSFSIL+NGS    F+P+RGLRQGDPLSP+LFL+C EGLS L+ +A+ +  I GLR       +SHLFFADDSL+FL+A  EE
Subjt:  IGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKARKEE

Query:  FDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ
           ++ ++  YE  +GQ +N+DKSE+  G+ +++++ G LA  L V +V++H KYLG PS + RNK+     I  KV+
Subjt:  FDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQ

A0A803PYI0 Uncharacterized protein4.4e-4248.89Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        M+++GF+  W+ KI  CV S SFS LING       P RGLRQGDPLSP+LFL C E LSSL+++ + +  + G+R  +    +SHLFFADDSL+F+ A 
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV
         +   + Q+I+  Y  A+GQIVN+ KSE  FG  V++E +  LA ++ V+ V +HGKYLG PSS+ RNKK  L+ I +KV
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKV

SwissProt top hitse value%identityAlignment
P11369 LINE-1 retrotransposable element ORF2 protein5.3e-0827.5Show/hide
Query:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR
        + + G    ++  I         +I +NG   E+     G RQG PLSPYLF +  E L+  +++    + I G++I K    IS L  ADD ++++   
Subjt:  MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKAR

Query:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLG
        K    E+  ++  +    G  +N +KS +AF      +A+  +       IV ++ KYLG
Subjt:  KEEFDEMQRIVKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLG

P92555 Uncharacterized mitochondrial protein AtMg012502.9e-1451.47Show/hide
Query:  LINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDS
        +ING+      PSRGLRQGDPLSPYLF++C E LS L ++A     + G+R++  +P I+HL FADD+
Subjt:  LINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDS

Arabidopsis top hitse value%identityAlignment
ATMG01250.1 RNA-directed DNA polymerase (reverse transcriptase)2.0e-1551.47Show/hide
Query:  LINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDS
        +ING+      PSRGLRQGDPLSPYLF++C E LS L ++A     + G+R++  +P I+HL FADD+
Subjt:  LINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGATAGGTTTTAGCTCAGCTTGGATAAAGAAGATTGGCATGTGTGTGGAATCTGTATCCTTTTCGATCCTTATTAATGGTAGTTGTTATGAATCTTTTAAGCC
CTCACGAGGGCTTAGACAGGGCGATCCGTTATCTCCTTATTTATTTCTCATGTGTGATGAGGGACTATCTAGCCTCCTAAAAAAGGCCGATATATCTCAAAATATTTCAG
GTCTTAGAATTGCAAAAACGGCACCACCTATCTCGCACCTCTTTTTTGCAGATGATAGTTTACTTTTTCTCAAAGCGCGAAAGGAGGAATTCGATGAGATGCAACGAATC
GTGAAAGTATATGAAGCAGCCACAGGACAGATCGTTAATTTTGATAAATCGGAGATAGCTTTTGGGGCCGGAGTGGCAAATGAAGCAAAAGGCTTTTTAGCCAACATTTT
AAAAGTCAAGATAGTCCAAGACCATGGAAAGTATCTTGGATGTCCGTCTTCCCTATCCAGAAATAAGAAAGCTTCTCTGAACTACATAACATCTAAAGTTCAGAATGTGT
TGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTAAGATAGGTTTTAGCTCAGCTTGGATAAAGAAGATTGGCATGTGTGTGGAATCTGTATCCTTTTCGATCCTTATTAATGGTAGTTGTTATGAATCTTTTAAGCC
CTCACGAGGGCTTAGACAGGGCGATCCGTTATCTCCTTATTTATTTCTCATGTGTGATGAGGGACTATCTAGCCTCCTAAAAAAGGCCGATATATCTCAAAATATTTCAG
GTCTTAGAATTGCAAAAACGGCACCACCTATCTCGCACCTCTTTTTTGCAGATGATAGTTTACTTTTTCTCAAAGCGCGAAAGGAGGAATTCGATGAGATGCAACGAATC
GTGAAAGTATATGAAGCAGCCACAGGACAGATCGTTAATTTTGATAAATCGGAGATAGCTTTTGGGGCCGGAGTGGCAAATGAAGCAAAAGGCTTTTTAGCCAACATTTT
AAAAGTCAAGATAGTCCAAGACCATGGAAAGTATCTTGGATGTCCGTCTTCCCTATCCAGAAATAAGAAAGCTTCTCTGAACTACATAACATCTAAAGTTCAGAATGTGT
TGTAG
Protein sequenceShow/hide protein sequence
MAKIGFSSAWIKKIGMCVESVSFSILINGSCYESFKPSRGLRQGDPLSPYLFLMCDEGLSSLLKKADISQNISGLRIAKTAPPISHLFFADDSLLFLKARKEEFDEMQRI
VKVYEAATGQIVNFDKSEIAFGAGVANEAKGFLANILKVKIVQDHGKYLGCPSSLSRNKKASLNYITSKVQNVL