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Lag0015991 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0015991
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:30929697..30930044
RNA-Seq ExpressionLag0015991
SyntenyLag0015991
Gene Ontology termsGO:0043170 - macromolecule metabolic process (biological process)
GO:0055086 - nucleobase-containing small molecule metabolic process (biological process)
GO:0072528 - pyrimidine-containing compound biosynthetic process (biological process)
GO:0110165 - cellular anatomical structure (cellular component)
GO:0004518 - nuclease activity (molecular function)
GO:0005488 - binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR009027 - Ribosomal protein L9/RNase H1, N-terminal
IPR011320 - Ribonuclease H1, N-terminal
IPR037056 - Ribonuclease H1, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE9465329.1 hypothetical protein C3L33_02763, partial [Rhododendron williamsianum]1.2e-0749.12Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
        MGG KFYVVFVGR   +Y  W  CS QV+ F G V++ Y  WD+A  A+  +T +V+
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
KAF7123603.1 hypothetical protein RHSIM_Rhsim12G0104200 [Rhododendron simsii]4.6e-0748.28Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVDN
        MG  KFYVVFVGR   +Y  W  CS QV+ F GVV++ Y  WD+A  A+  +T +V++
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVDN
KAF7142433.1 hypothetical protein RHSIM_Rhsim05G0091300 [Rhododendron simsii]3.2e-0852.63Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
        M G KFYVVFVGR   +Y +W  CS QV+GFSG V+  +  WD+A  A+ AYT +V+
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
KAF7144852.1 hypothetical protein RHSIM_Rhsim04G0120400 [Rhododendron simsii]1.1e-0547.37Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
        M G KFYVVF+GR   +Y +W  CS QV  F G V+  +  WD+A  A+ AYT +V+
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
WP_068606887.1 ribonuclease H family protein [Paenibacillus swuensis]5.1e-0649.02Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
        M  +KFYVV+ GR   +YT+W EC +Q+HG++G  Y+SYE   +A+ AY A
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
TrEMBL top hitse value%identityAlignment
A0A172TIY4 Ribonuclease H2.4e-0649.02Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
        M  +KFYVV+ GR   +YT+W EC +Q+HG++G  Y+SYE   +A+ AY A
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
A0A329EU75 Ribonuclease H7.1e-0649.02Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
        M   K+YVV+ GR   +YTTW EC  QVHGF G  Y+S+   ++AE+A+ A
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
A0A6A4MEB8 RING-type domain-containing protein (Fragment)5.8e-0849.12Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
        MGG KFYVVFVGR   +Y  W  CS QV+ F G V++ Y  WD+A  A+  +T +V+
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVD
A0A6I0BXZ6 Ribonuclease H7.1e-0649.02Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
        M   K+YVV+ GR   +YTTW EC  QVHGF G  Y+S+   ++AE+A+ A
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTA
A0A7J0H9E6 Aspartate carbamoyltransferase7.1e-0637.39Show/hide
Query:  MGGNK-FYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAY---TAYTMEVDNHSTHHGDLDLHTSSPNCDLDRIVVNRAGSTCSGAYHVL
        MGG + FYVVFVGR+  +Y TW  CS+QV+GF   VYQ Y  WD+A  A+    A +M +  +      L     S N         +  ST SG  H  
Subjt:  MGGNK-FYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAY---TAYTMEVDNHSTHHGDLDLHTSSPNCDLDRIVVNRAGSTCSGAYHVL

Query:  LFIVGFLLGVAVIIL
          ++ FLLG  + +L
Subjt:  LFIVGFLLGVAVIIL
SwissProt top hitse value%identityAlignment
Q07762 Ribonuclease H2.1e-0745Show/hide
Query:  FYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVDNHSTHHGD
        FYVV VGR   +Y+TW +CS QV GFSG VY+S+    +A A  TA+        +  GD
Subjt:  FYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVDNHSTHHGD
Q9KEI9 Ribonuclease H9.0e-0642.86Show/hide
Query:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAY
        M  +K+YVV+ GR   +YT+W  C  QV G++G  ++SY   ++AEAA+
Subjt:  MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAY
Q9UST8 Ribonuclease H8.4e-0437.84Show/hide
Query:  MGGNK--FYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVDNHSTHHGDLDLHTSS
        MGGNK  +Y V  GR   +Y+TW E S QV G+ G     Y+++D  EAA      E   +S+  G     T+S
Subjt:  MGGNK--FYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVDNHSTHHGDLDLHTSS
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGAACAAATTCTACGTCGTTTTCGTTGGGCGCATGGCCGATGTTTACACGACGTGGTACGAGTGTTCCCGCCAAGTACACGGTTTTAGTGGTGTCGTATACCA
ATCGTACGAGAGGTGGGACGACGCAGAAGCAGCTTATACCGCTTACACCATGGAAGTGGACAATCATTCCACTCATCATGGAGACCTTGACCTTCACACTAGCTCTCCTA
ACTGTGACCTGGATAGGATTGTAGTTAATAGGGCTGGTAGCACATGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGTTTTTGCTTGGTGTAGCTGTCATCATA
TTAGGTGGTCTTATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGAACAAATTCTACGTCGTTTTCGTTGGGCGCATGGCCGATGTTTACACGACGTGGTACGAGTGTTCCCGCCAAGTACACGGTTTTAGTGGTGTCGTATACCA
ATCGTACGAGAGGTGGGACGACGCAGAAGCAGCTTATACCGCTTACACCATGGAAGTGGACAATCATTCCACTCATCATGGAGACCTTGACCTTCACACTAGCTCTCCTA
ACTGTGACCTGGATAGGATTGTAGTTAATAGGGCTGGTAGCACATGTAGTGGAGCATACCATGTTCTCCTCTTCATAGTAGGGTTTTTGCTTGGTGTAGCTGTCATCATA
TTAGGTGGTCTTATGTAG
Protein sequenceShow/hide protein sequence
MGGNKFYVVFVGRMADVYTTWYECSRQVHGFSGVVYQSYERWDDAEAAYTAYTMEVDNHSTHHGDLDLHTSSPNCDLDRIVVNRAGSTCSGAYHVLLFIVGFLLGVAVII
LGGLM