; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016011 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016011
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:31429082..31429669
RNA-Seq ExpressionLag0016011
SyntenyLag0016011
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283
IPR040256 - Uncharacterized protein At4g02000-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132681.1 uncharacterized protein LOC111005481 [Momordica charantia]1.6e-3140.8Show/hide
Query:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP
        MA  ++LE W+ F L +EE+   VD+D  A   TGK L  SLI KLL+ R I+  V++ T K AW +      V+ +G N+FLF+     D+ RILR GP
Subjt:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP

Query:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
        W FD+ L+++   + + KP  M+F+  + WV+F +L +   N++MA RLGNAIG F+D ++    + W   LRV
Subjt:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]2.7e-3643.93Show/hide
Query:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPW
        M +E++L +W+KF L +EE+   +DVD  A  +  + L +SL+GKLLA R I+ DV+ R    AW + + L VE +G NLFLF    E D  R+++ GPW
Subjt:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPW

Query:  LFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
         FDK L+VL K       + +EF   AFW++  +LPM   N++MA RLGNAIG F D D   +G+ W  SLR+
Subjt:  LFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]5.9e-3140.8Show/hide
Query:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP
        MA  D+LE W+ F L +EEE T +DVD  A   TG  L   L+GKL   R I   VM+ T ++AW +  N   V+ LG NLFLFS    +D+ +I + GP
Subjt:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP

Query:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
        W FD+ L++++K + ++ P+ ++F     WV F +LP+    R MA RLGNA+G F++ D       W  +LRV
Subjt:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

XP_028122006.1 uncharacterized protein LOC114319195 [Camellia sinensis]7.7e-2335.88Show/hide
Query:  EDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWLFD
        + +L+     SL +EE++         +++ GKS    L+GKLL  R    + M+ T  S W    G+ V  +G NLF+F     VD+ R+L  GPW FD
Subjt:  EDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWLFD

Query:  KFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
        K LL+L +  P V+P+ ++     FWV+ C LP+ L N+ + E +GNA+GQF D D    G  W  ++R+
Subjt:  KFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

XP_028124075.1 uncharacterized protein LOC114321128 [Camellia sinensis]3.8e-2234.71Show/hide
Query:  EDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWLFD
        + +++     SL +EE++         +++ GKS    L+GKLL  R    + M+ T  S W    G+ V  +G NLF+F     VD+ R+L  GPW FD
Subjt:  EDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWLFD

Query:  KFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
        K LL+L +  P V+P+ ++     FWV+ C LP+ L N+ + + +GNA+GQF D D    G  W  ++R+
Subjt:  KFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

TrEMBL top hitse value%identityAlignment
A0A1R3KUZ6 DUF4283 domain-containing protein1.0e-2034.88Show/hide
Query:  AYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWL
        A EDM   W+KFSL  EEES  V VD +    T       LIGKLL+ R +  +VMR      W +  GL ++ +G  LF+F  + E+++ R+ +Q PW 
Subjt:  AYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWL

Query:  FDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
        F+K LLVL ++       ++  +  +FWV   +LP+ L N  + + +G+++G  ++ D  G    W+  LRV
Subjt:  FDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

A0A2N9FJK9 CCHC-type domain-containing protein1.7e-2033.53Show/hide
Query:  EDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWLFD
        ++++E+W +FSL  E+E+    +  +A   +       L+GKLL  +F     ++ T    W   +G+V + +G NLFLF  Q + D  R+L   PWLFD
Subjt:  EDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPWLFD

Query:  KFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
          LLVL+          + F +  FWV F  +P+    +   ERLG AIG  +  D    G GW   LRV
Subjt:  KFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

A0A6J1BSZ1 uncharacterized protein LOC1110054817.5e-3240.8Show/hide
Query:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP
        MA  ++LE W+ F L +EE+   VD+D  A   TGK L  SLI KLL+ R I+  V++ T K AW +      V+ +G N+FLF+     D+ RILR GP
Subjt:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP

Query:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
        W FD+ L+++   + + KP  M+F+  + WV+F +L +   N++MA RLGNAIG F+D ++    + W   LRV
Subjt:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

A0A6J1DU55 uncharacterized protein LOC1110231351.3e-3643.93Show/hide
Query:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPW
        M +E++L +W+KF L +EE+   +DVD  A  +  + L +SL+GKLLA R I+ DV+ R    AW + + L VE +G NLFLF    E D  R+++ GPW
Subjt:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTEVDQTRILRQGPW

Query:  LFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
         FDK L+VL K       + +EF   AFW++  +LPM   N++MA RLGNAIG F D D   +G+ W  SLR+
Subjt:  LFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

A0A6J1DX30 uncharacterized protein LOC1110248742.9e-3140.8Show/hide
Query:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP
        MA  D+LE W+ F L +EEE T +DVD  A   TG  L   L+GKL   R I   VM+ T ++AW +  N   V+ LG NLFLFS    +D+ +I + GP
Subjt:  MAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIP-NGLVVEKLGPNLFLFSLQTEVDQTRILRQGP

Query:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV
        W FD+ L++++K + ++ P+ ++F     WV F +LP+    R MA RLGNA+G F++ D       W  +LRV
Subjt:  WLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G31430.1 unknown protein4.4e-0831.65Show/hide
Query:  FLFSLQTEVDQTRILRQGPWLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYD
        F+F+L+  ++   +LR+GPW F+ ++++L +  P +      F +  FWV    +P    NR + E +G A+GQ  D D
Subjt:  FLFSLQTEVDQTRILRQGPWLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYD

AT3G42140.1 zinc ion binding;nucleic acid binding3.8e-0426.58Show/hide
Query:  FSLQTEVDQTRILRQGPWLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNG
        F  Q+E     ILR+GPW F+ ++ V+ +   +   +  EFK   FW+    +P+      +   +G  +G F + + G
Subjt:  FSLQTEVDQTRILRQGPWLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTGACAATCAAATTCAAACGCTTGTCATCAAAATTCGATACCTACAGATTCTATATCACTATGGCTTATGAAGATATGCTCGAGAACTGGGAAAAATTCAGCCT
TGCGGCTGAAGAAGAGTCCACTAAAGTGGATGTAGATCGACAAGCAGCAGTGATCACGGGGAAATCACTAGGGTTCAGCTTAATCGGCAAGCTCCTAGCTCCAAGATTCA
TTGCGGGGGATGTGATGCGCAGGACTTTCAAATCAGCATGGAATATACCGAATGGGCTCGTTGTGGAAAAACTTGGACCCAACCTGTTCCTCTTCTCTCTGCAGACAGAG
GTTGATCAAACAAGGATTCTAAGACAGGGGCCATGGCTTTTCGACAAATTTCTCCTGGTCCTTTCGAAGCACATTCCCATGGTAAAGCCAACGGCCATGGAGTTCAAATA
CTCAGCTTTCTGGGTGAATTTCTGTGAGCTCCCTATGGATCTTTATAATCGATCAATGGCGGAACGACTAGGCAACGCAATCGGTCAATTTCAGGATTATGACAACGGTG
GGCGAGGATATGGGTGGAAGGAAAGCCTTCGTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATTGACAATCAAATTCAAACGCTTGTCATCAAAATTCGATACCTACAGATTCTATATCACTATGGCTTATGAAGATATGCTCGAGAACTGGGAAAAATTCAGCCT
TGCGGCTGAAGAAGAGTCCACTAAAGTGGATGTAGATCGACAAGCAGCAGTGATCACGGGGAAATCACTAGGGTTCAGCTTAATCGGCAAGCTCCTAGCTCCAAGATTCA
TTGCGGGGGATGTGATGCGCAGGACTTTCAAATCAGCATGGAATATACCGAATGGGCTCGTTGTGGAAAAACTTGGACCCAACCTGTTCCTCTTCTCTCTGCAGACAGAG
GTTGATCAAACAAGGATTCTAAGACAGGGGCCATGGCTTTTCGACAAATTTCTCCTGGTCCTTTCGAAGCACATTCCCATGGTAAAGCCAACGGCCATGGAGTTCAAATA
CTCAGCTTTCTGGGTGAATTTCTGTGAGCTCCCTATGGATCTTTATAATCGATCAATGGCGGAACGACTAGGCAACGCAATCGGTCAATTTCAGGATTATGACAACGGTG
GGCGAGGATATGGGTGGAAGGAAAGCCTTCGTGTTTGA
Protein sequenceShow/hide protein sequence
MVLTIKFKRLSSKFDTYRFYITMAYEDMLENWEKFSLAAEEESTKVDVDRQAAVITGKSLGFSLIGKLLAPRFIAGDVMRRTFKSAWNIPNGLVVEKLGPNLFLFSLQTE
VDQTRILRQGPWLFDKFLLVLSKHIPMVKPTAMEFKYSAFWVNFCELPMDLYNRSMAERLGNAIGQFQDYDNGGRGYGWKESLRV