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Lag0016044 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016044
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:32365634..32366011
RNA-Seq ExpressionLag0016044
SyntenyLag0016044
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EEC79647.1 hypothetical protein OsI_20882 [Oryza sativa Indica Group]7.9e-2143.2Show/hide
Query:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE
        ++  K  G +GF D  LFN+A+LA+ +WR+I + DSL ARVLK  YF   S ++     NAS VW++I +G SL KEG+ W+I NGK V + +DPW+  +
Subjt:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE

Query:  GSMFPLWVKEEFKNKRVCDLIRDDG
         S  P+  K   + K V DL+ ++G
Subjt:  GSMFPLWVKEEFKNKRVCDLIRDDG

PKA49974.1 Putative ribonuclease H protein [Apostasia shenzhenica]2.7e-2146.83Show/hide
Query:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE
        +S+SK  G MGF +LS FNKA+LAK  WRII   +SLMARVLK  YF    FL A++  N+S +W SI WGR L K GLRW+I NG  V +  DPW+   
Subjt:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE

Query:  GSMFPLW-VKEEFKNKRVCDLIRDDG
         S   +          R+ +L+ +DG
Subjt:  GSMFPLW-VKEEFKNKRVCDLIRDDG

XP_016458490.1 PREDICTED: uncharacterized protein LOC107782157 [Nicotiana tabacum]5.5e-2244Show/hide
Query:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE
        + +SK  G +GF DL  FN A+LAK +WRI+   DSL+ RVLK  YFS  +FL+A + +  S +W SI WGR L   GLRW+I NGK + +  DPWI  +
Subjt:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE

Query:  GSMFPLWVK-EEFKNKRVCDLIRDD
            P  ++ +   + +V DLI +D
Subjt:  GSMFPLWVK-EEFKNKRVCDLIRDD

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]1.1e-2251.96Show/hide
Query:  SKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSM
        SK+ G +GF DL +FN+AMLAK SW+IIK+ +SL+ RVL+  YF   +F+ A+  +N S VW SI WG+ LF +G+RW+I NG  V +  DPWI  EGS 
Subjt:  SKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSM

Query:  FP
         P
Subjt:  FP

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.0e-2447.11Show/hide
Query:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF
        KD+G MGF D+S+FN+AMLAK SWRI++  DSL+A+ L+  YF   SFL AK     S  W SI WGR LFK+G RWK+ NG  + L+ DPW+  +G+  
Subjt:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF

Query:  PLWVKEEFKNKRVCDLIRDDG
        P++     +N  V  L+   G
Subjt:  PLWVKEEFKNKRVCDLIRDDG

TrEMBL top hitse value%identityAlignment
A0A1S3Z252 uncharacterized protein LOC1077821572.6e-2244Show/hide
Query:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE
        + +SK  G +GF DL  FN A+LAK +WRI+   DSL+ RVLK  YFS  +FL+A + +  S +W SI WGR L   GLRW+I NGK + +  DPWI  +
Subjt:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE

Query:  GSMFPLWVK-EEFKNKRVCDLIRDD
            P  ++ +   + +V DLI +D
Subjt:  GSMFPLWVK-EEFKNKRVCDLIRDD

A0A2I0A354 Ribonuclease H protein1.3e-2146.83Show/hide
Query:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE
        +S+SK  G MGF +LS FNKA+LAK  WRII   +SLMARVLK  YF    FL A++  N+S +W SI WGR L K GLRW+I NG  V +  DPW+   
Subjt:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE

Query:  GSMFPLW-VKEEFKNKRVCDLIRDDG
         S   +          R+ +L+ +DG
Subjt:  GSMFPLW-VKEEFKNKRVCDLIRDDG

A0A6J1CV63 uncharacterized protein LOC1110146625.3e-2351.96Show/hide
Query:  SKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSM
        SK+ G +GF DL +FN+AMLAK SW+IIK+ +SL+ RVL+  YF   +F+ A+  +N S VW SI WG+ LF +G+RW+I NG  V +  DPWI  EGS 
Subjt:  SKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSM

Query:  FP
         P
Subjt:  FP

A0A6J1DRA0 uncharacterized protein LOC1110224239.7e-2547.11Show/hide
Query:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF
        KD+G MGF D+S+FN+AMLAK SWRI++  DSL+A+ L+  YF   SFL AK     S  W SI WGR LFK+G RWK+ NG  + L+ DPW+  +G+  
Subjt:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF

Query:  PLWVKEEFKNKRVCDLIRDDG
        P++     +N  V  L+   G
Subjt:  PLWVKEEFKNKRVCDLIRDDG

B8B0K2 CCHC-type domain-containing protein3.8e-2143.2Show/hide
Query:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE
        ++  K  G +GF D  LFN+A+LA+ +WR+I + DSL ARVLK  YF   S ++     NAS VW++I +G SL KEG+ W+I NGK V + +DPW+  +
Subjt:  MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNE

Query:  GSMFPLWVKEEFKNKRVCDLIRDDG
         S  P+  K   + K V DL+ ++G
Subjt:  GSMFPLWVKEEFKNKRVCDLIRDDG

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003102.6e-1138.24Show/hide
Query:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF
        +D G +GF DL  FN+A+LAK S+RII    +L++R+L+  YF   S +        S  W SI  GR L   GL   I +G    +  D WI +E  + 
Subjt:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF

Query:  PL
        PL
Subjt:  PL

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein3.4e-1431.78Show/hide
Query:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF
        K  G +GF D+  FN A+L K  WR++   +SLMA+V K  YF +   LNA   +  S VW+SIH  + + ++G R  + NG+ + + +  W+ ++ +  
Subjt:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF

Query:  PLWVK----EEFKN----KRVCDLIRDDG
         L ++    +E+ +     +V DLI + G
Subjt:  PLWVK----EEFKN----KRVCDLIRDDG

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein1.9e-1238.24Show/hide
Query:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF
        +D G +GF DL  FN+A+LAK S+RII    +L++R+L+  YF   S +        S  W SI  GR L   GL   I +G    +  D WI +E  + 
Subjt:  KDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMF

Query:  PL
        PL
Subjt:  PL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGAAAGCAAAGACATGGGGAGGATGGGTTTTTGTGACCTCTCCCTCTTCAACAAAGCAATGCTTGCAAAAATAAGCTGGAGAATCATCAAATCCCTCGACAGTCT
CATGGCAAGAGTGCTTAAAAGGGATTATTTCAGCGAAAGGTCCTTTCTTAATGCAAAATCCAAGAACAATGCTTCTTTGGTTTGGGAGAGCATCCATTGGGGTCGCTCTC
TATTCAAAGAAGGACTCAGATGGAAGATTGACAATGGAAAGCAAGTTTATCTAGCCCAAGATCCTTGGATAACTAACGAAGGAAGCATGTTCCCTTTATGGGTGAAGGAG
GAGTTTAAAAACAAGAGGGTTTGCGACTTAATTAGAGATGACGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTGAAAGCAAAGACATGGGGAGGATGGGTTTTTGTGACCTCTCCCTCTTCAACAAAGCAATGCTTGCAAAAATAAGCTGGAGAATCATCAAATCCCTCGACAGTCT
CATGGCAAGAGTGCTTAAAAGGGATTATTTCAGCGAAAGGTCCTTTCTTAATGCAAAATCCAAGAACAATGCTTCTTTGGTTTGGGAGAGCATCCATTGGGGTCGCTCTC
TATTCAAAGAAGGACTCAGATGGAAGATTGACAATGGAAAGCAAGTTTATCTAGCCCAAGATCCTTGGATAACTAACGAAGGAAGCATGTTCCCTTTATGGGTGAAGGAG
GAGTTTAAAAACAAGAGGGTTTGCGACTTAATTAGAGATGACGGGTAG
Protein sequenceShow/hide protein sequence
MSESKDMGRMGFCDLSLFNKAMLAKISWRIIKSLDSLMARVLKRDYFSERSFLNAKSKNNASLVWESIHWGRSLFKEGLRWKIDNGKQVYLAQDPWITNEGSMFPLWVKE
EFKNKRVCDLIRDDG