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Lag0016049 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016049
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:32399174..32399666
RNA-Seq ExpressionLag0016049
SyntenyLag0016049
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5481481.1 hypothetical protein F2P56_002126 [Juglans regia]1.1e-1032.47Show/hide
Query:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI--------------------------DYVQ
        SKNV S + E   R  G++  +S   YLG+P   GR K   F  +K K+W+ LQ WKEKL   GG+E  I                            + 
Subjt:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI--------------------------DYVQ

Query:  NFGGGRRMERTMRIGYV-------GRVYVLAKTKELEAFNQALLVKQGWRILRE
         F  G++ +   RI ++        + +     K+L  FN ALL KQGWRIL+E
Subjt:  NFGGGRRMERTMRIGYV-------GRVYVLAKTKELEAFNQALLVKQGWRILRE

XP_015386227.1 uncharacterized protein LOC107177230 [Citrus sinensis]9.6e-1233.76Show/hide
Query:  NVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKE----TSIDYVQNFGGG---------RRMERTMRIG
        NVR+   +    IL + AT + G+YLG+PS  GRNK   FR ++DK W+ LQNW +KL    GKE    T    + N+            R +ER M   
Subjt:  NVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKE----TSIDYVQNFGGG---------RRMERTMRIG

Query:  YVG--------------------RVYVLAKTKELEAFNQALLVKQGWRILREPNCWV
        + G                    + Y     K+L  FN A+L KQGWR+L +P+  V
Subjt:  YVG--------------------RVYVLAKTKELEAFNQALLVKQGWRILREPNCWV

XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]7.8e-1432.7Show/hide
Query:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSID-------------------------
        MFM S+N       N E  L +  T  +G YLG+PSQ  RNK  +F  + +++W+ LQ WKEKLF +GGKE  I                          
Subjt:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSID-------------------------

Query:  --YVQNFGGGRRMERTMRIGYVGRVYVLAKT-----KELEAFNQALLVKQGWRILREPN
          Y + + G    E+ +      R+ V  +      K+L  FNQA+L KQ W+I++ PN
Subjt:  --YVQNFGGGRRMERTMRIGYVGRVYVLAKT-----KELEAFNQALLVKQGWRILREPN

XP_022157437.1 uncharacterized protein LOC111024135 [Momordica charantia]9.6e-1248.65Show/hide
Query:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI
        MF+ SKN +   V    + L +  T+SLG YLG+PSQ GRNK  +F  +KD++WK LQ WK KLF  GG+E  +
Subjt:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI

XP_024035529.1 uncharacterized protein LOC112096333 [Citrus clementina]2.1e-1132.69Show/hide
Query:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKE----TSIDYVQNFGGG---------RRMERTMR
        S NVR++  +    IL + AT + G+YLG+PS  GRNK   FR ++DK+W+ LQ W +KL    GKE    T    + N+            R +ER M 
Subjt:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKE----TSIDYVQNFGGG---------RRMERTMR

Query:  IGYVGRVYVLAK--------------------TKELEAFNQALLVKQGWRILREPN
          + G  +  ++                     K+L  FN A+L KQGWR+L  P+
Subjt:  IGYVGRVYVLAK--------------------TKELEAFNQALLVKQGWRILREPN

TrEMBL top hitse value%identityAlignment
A0A2N9HV89 Reverse transcriptase domain-containing protein5.1e-1133.58Show/hide
Query:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSIDYVQNFGGGRRMERTMRIGYVGRVYV
        +F +S   R  + E  + +LG+ A +    YLG+PS  GR+K + F  +K+++W+ LQ WKEKL    GKE  I  V        M    RI +V    +
Subjt:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSIDYVQNFGGGRRMERTMRIGYVGRVYV

Query:  LAKT-------KELEAFNQALLVKQGWRILREPN
          K        ++++ FN A+L KQ WR+L   N
Subjt:  LAKT-------KELEAFNQALLVKQGWRILREPN

A0A392MKK5 RNA-directed DNA polymerase (Reverse transcriptase) (Fragment)6.7e-1129.75Show/hide
Query:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI--------DYVQN-----------------
        S+N+     E+  RI+G++     GNYLG+PS  GR K   F  VKD+IWK + +W+ +     GKE  I         YV +                 
Subjt:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI--------DYVQN-----------------

Query:  ---FGGGRRMERTMRIGYVGRVYVLAK----TKELEAFNQALLVKQGWRILREPNCWV
           +GGG   +    + +    Y  A+     ++L AFN A++ KQGW I+ +P+  V
Subjt:  ---FGGGRRMERTMRIGYVGRVYVLAK----TKELEAFNQALLVKQGWRILREPNCWV

A0A5B6VGJ9 Reverse transcriptase8.8e-1132.88Show/hide
Query:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSID-----------------------YVQNFG
        S N R  E     +ILG++ +    +YLG+P+  GR K   F+ +KD+  + + NW  +    GGKE  I                         +QNFG
Subjt:  SKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSID-----------------------YVQNFG

Query:  GGRRMERTMRIGYVGRVYVLAKTKELEAFNQALLVKQGWRILREPN
        G R +     IG  G++Y L K K +  FN ALL KQGW ++  PN
Subjt:  GGRRMERTMRIGYVGRVYVLAKTKELEAFNQALLVKQGWRILREPN

A0A6J1CV63 uncharacterized protein LOC1110146623.8e-1432.7Show/hide
Query:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSID-------------------------
        MFM S+N       N E  L +  T  +G YLG+PSQ  RNK  +F  + +++W+ LQ WKEKLF +GGKE  I                          
Subjt:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSID-------------------------

Query:  --YVQNFGGGRRMERTMRIGYVGRVYVLAKT-----KELEAFNQALLVKQGWRILREPN
          Y + + G    E+ +      R+ V  +      K+L  FNQA+L KQ W+I++ PN
Subjt:  --YVQNFGGGRRMERTMRIGYVGRVYVLAKT-----KELEAFNQALLVKQGWRILREPN

A0A6J1DUG8 uncharacterized protein LOC1110241354.6e-1248.65Show/hide
Query:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI
        MF+ SKN +   V    + L +  T+SLG YLG+PSQ GRNK  +F  +KD++WK LQ WK KLF  GG+E  +
Subjt:  MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTATGGCCAGTAAGAACGTTAGAAGCATGGAGGTGGAGAATTGTGAAAGGATTTTAGGCATCAAAGCAACCAAAAGCCTTGGGAACTACCTTGGAATGCCTTCGCA
AAATGGGAGAAATAAGGGCATGTTGTTTAGAAGAGTGAAAGATAAGATTTGGAAAGTCCTTCAGAATTGGAAAGAGAAGCTGTTCTTAGCGGGTGGTAAAGAGACATCAA
TAGATTATGTGCAAAATTTTGGTGGGGGGCGGCGAATGGAAAGAACAATGCGCATTGGCTATGTTGGAAGGGTTTATGTGTTAGCAAAGACAAAGGAGTTGGAGGCTTTT
AACCAAGCTCTCCTAGTTAAGCAAGGCTGGAGAATACTCCGTGAGCCGAACTGTTGGGTTTTATGCCCTAAAACTCGTGTATAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTATGGCCAGTAAGAACGTTAGAAGCATGGAGGTGGAGAATTGTGAAAGGATTTTAGGCATCAAAGCAACCAAAAGCCTTGGGAACTACCTTGGAATGCCTTCGCA
AAATGGGAGAAATAAGGGCATGTTGTTTAGAAGAGTGAAAGATAAGATTTGGAAAGTCCTTCAGAATTGGAAAGAGAAGCTGTTCTTAGCGGGTGGTAAAGAGACATCAA
TAGATTATGTGCAAAATTTTGGTGGGGGGCGGCGAATGGAAAGAACAATGCGCATTGGCTATGTTGGAAGGGTTTATGTGTTAGCAAAGACAAAGGAGTTGGAGGCTTTT
AACCAAGCTCTCCTAGTTAAGCAAGGCTGGAGAATACTCCGTGAGCCGAACTGTTGGGTTTTATGCCCTAAAACTCGTGTATAG
Protein sequenceShow/hide protein sequence
MFMASKNVRSMEVENCERILGIKATKSLGNYLGMPSQNGRNKGMLFRRVKDKIWKVLQNWKEKLFLAGGKETSIDYVQNFGGGRRMERTMRIGYVGRVYVLAKTKELEAF
NQALLVKQGWRILREPNCWVLCPKTRV