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Lag0016050 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016050
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:32409572..32409874
RNA-Seq ExpressionLag0016050
SyntenyLag0016050
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_024190234.1 uncharacterized protein LOC112194221 [Rosa chinensis]7.0e-0436.73Show/hide
Query:  MVRDSDRSPIYAGMKNTSKNWSIKGLKAYAILEGLKLIHARDDGNQELVIESDALHIVNCLNGNSVDLSEVKNILDAIVTLAPLVERLSFKHCPRKEN
        +VRD +     AG K    N SI  ++A A+  GL L   R+ G Q LV+ESD+  +++ LN   +DLS    +LD I  LA   E + +K   R+ N
Subjt:  MVRDSDRSPIYAGMKNTSKNWSIKGLKAYAILEGLKLIHARDDGNQELVIESDALHIVNCLNGNSVDLSEVKNILDAIVTLAPLVERLSFKHCPRKEN
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCGCGACTCCGACAGGTCTCCAATCTACGCGGGCATGAAAAATACGTCAAAGAACTGGTCGATTAAAGGGCTCAAAGCTTACGCGATCCTTGAAGGGTTAAAATT
GATTCATGCAAGAGACGATGGGAACCAAGAGCTGGTGATCGAATCCGATGCACTCCACATTGTCAACTGCCTCAATGGAAATTCGGTGGACCTCTCGGAGGTCAAAAACA
TTCTTGATGCCATAGTCACTTTGGCTCCTTTGGTTGAAAGACTGTCGTTCAAGCACTGCCCTCGGAAGGAGAATCATTTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCGCGACTCCGACAGGTCTCCAATCTACGCGGGCATGAAAAATACGTCAAAGAACTGGTCGATTAAAGGGCTCAAAGCTTACGCGATCCTTGAAGGGTTAAAATT
GATTCATGCAAGAGACGATGGGAACCAAGAGCTGGTGATCGAATCCGATGCACTCCACATTGTCAACTGCCTCAATGGAAATTCGGTGGACCTCTCGGAGGTCAAAAACA
TTCTTGATGCCATAGTCACTTTGGCTCCTTTGGTTGAAAGACTGTCGTTCAAGCACTGCCCTCGGAAGGAGAATCATTTCTGA
Protein sequenceShow/hide protein sequence
MVRDSDRSPIYAGMKNTSKNWSIKGLKAYAILEGLKLIHARDDGNQELVIESDALHIVNCLNGNSVDLSEVKNILDAIVTLAPLVERLSFKHCPRKENHF