; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016063 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016063
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:32684456..32685166
RNA-Seq ExpressionLag0016063
SyntenyLag0016063
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022158830.1 uncharacterized protein LOC111025293 [Momordica charantia]1.5e-2336.75Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKK--
        +G R + +    LLTIKQ+  ESLRDY+ RFNEE LQ         LL      R+   S                             S  + D K+  
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKK--

Query:  DKRQRIDEGARG-------RPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY
         KR+R  +  +G       R  Q D  +KFEKYTPT++P+EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++   LK+E+E LIR GY
Subjt:  DKRQRIDEGARG-------RPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY

Query:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR
        LKE+  + +A Q          G+ +  P  EIR
Subjt:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR

XP_022159192.1 uncharacterized protein LOC111025612 [Momordica charantia]3.1e-2143.14Show/hide
Query:  LQELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHS
        L++ L+ K++ ++ +RS      SK +K+ R+         Q D  +KFEKYTPT++PLEQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDHGH+
Subjt:  LQELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHS

Query:  TRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR
        T +   LK+E+E LIR GYLKE+    +A      P R++   DN  P  EIR
Subjt:  TRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR

XP_022159368.1 uncharacterized protein LOC111025785 [Momordica charantia]4.8e-2235.47Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKKDK
        +G R + +    LLTIKQ+  ESL DY+ RFN+E LQ         LL      R+   S                             S  + D K+  
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKKDK

Query:  RQRIDEG---------ARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY
        ++R   G          R R  Q D  +KFEKYTPT++PLEQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++Y  LK+E+E LIR GY
Subjt:  RQRIDEG---------ARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY

Query:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR
        L+E+  + +A Q          G+    P  EIR
Subjt:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR

XP_023888238.1 uncharacterized protein LOC112000356 [Quercus suber]1.0e-1936.41Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEAL------QELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLK------------
        +G    +KS   L++IKQ+  E+LR YIT FN+EAL       ++L +  + R  K  +    + K  KR+R +EG R +  +   +             
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEAL------QELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLK------------

Query:  -KFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEAD
         +F  +TP + P++Q+LM+I++   L  P KLKS+P  R + +YC FHRDHGH T +   LK +IEALIR G L++F  K   D
Subjt:  -KFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEAD

XP_023905316.1 uncharacterized protein LOC112017085 [Quercus suber]1.9e-1832.11Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEA-----------------------------------LQELL----------------KSKKSKREH
        +G    +KS   L++I+Q+  E+LR YITRFN+EA                                   + E+L                + K  KRE 
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEA-----------------------------------LQELL----------------KSKKSKREH

Query:  KRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEAL
        ++ +  D D K DKR +   G            KF  +TP + P++Q+LM+I++   L  P KLK +P+ R + +YC FHRDH H T +Y  LK +IEAL
Subjt:  KRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEAL

Query:  IRNGYLKEFTTKAEADQR
        IR G L++F +K   DQ+
Subjt:  IRNGYLKEFTTKAEADQR

TrEMBL top hitse value%identityAlignment
A0A2N9E6Z9 Ribonuclease H2.7e-1834.1Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEAL------QELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPL
        +G +  R+   +LL +KQ+ GE+LR Y+TRFN+E L       ++   KK K E+    +   +++   ++  +     R  +G   ++F  +TP + P+
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEAL------QELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPL

Query:  EQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQR
        + I M+I+N   L  P KL ++PD R + +YC FHRDHGH+T +   LK +IE LI+ G L+ F  K + + R
Subjt:  EQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQR

A0A2N9FKL2 Ribonuclease H1.6e-1832.98Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEAL---------------------QELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGD
        +G +   +   +LL +KQ+ GE+LR Y+TRFN+E L                     ++    KK K +H    +  H++ + K QR   G +       
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEAL---------------------QELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGD

Query:  YLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQR
        + ++F ++TP + P++ I M+I+N   L  P KL ++PD R + +YC FHRDHGH+T N   LK +IE LI+ G L+ F  K + + R
Subjt:  YLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQR

A0A6J1DWY0 uncharacterized protein LOC1110252937.3e-2436.75Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKK--
        +G R + +    LLTIKQ+  ESLRDY+ RFNEE LQ         LL      R+   S                             S  + D K+  
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKK--

Query:  DKRQRIDEGARG-------RPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY
         KR+R  +  +G       R  Q D  +KFEKYTPT++P+EQ+LMEI++  LL  P ++K++   R K +YCLFHRDHGH+T++   LK+E+E LIR GY
Subjt:  DKRQRIDEGARG-------RPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY

Query:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR
        LKE+  + +A Q          G+ +  P  EIR
Subjt:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR

A0A6J1DYL6 uncharacterized protein LOC1110257852.3e-2235.47Show/hide
Query:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKKDK
        +G R + +    LLTIKQ+  ESL DY+ RFN+E LQ         LL      R+   S                             S  + D K+  
Subjt:  MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQ--------ELLKSKKSKREHKRS-----------------------------SSSDHDSKKDK

Query:  RQRIDEG---------ARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY
        ++R   G          R R  Q D  +KFEKYTPT++PLEQ+LMEI++  LL  P ++K     R K +YCLFHRDH H+T++Y  LK+E+E LIR GY
Subjt:  RQRIDEG---------ARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGY

Query:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR
        L+E+  + +A Q          G+    P  EIR
Subjt:  LKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR

A0A6J1DZ52 uncharacterized protein LOC1110256121.5e-2143.14Show/hide
Query:  LQELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHS
        L++ L+ K++ ++ +RS      SK +K+ R+         Q D  +KFEKYTPT++PLEQ+LMEI++  LL  P  +K+ P+ R K +YCLFHRDHGH+
Subjt:  LQELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVPRKLKSNPDNRDKSQYCLFHRDHGHS

Query:  TRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR
        T +   LK+E+E LIR GYLKE+    +A      P R++   DN  P  EIR
Subjt:  TRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCCAGAGAACAACGCAAGTCTCACATCAACCTCTTAACTATCAAACAGCAGCCAGGTGAGAGCTTGCGCGATTATATAACACGTTTTAACGAGGAAGCACTACA
GGAGTTGCTCAAGTCAAAGAAGTCGAAACGAGAACACAAGAGGTCTTCTTCATCTGACCACGACAGTAAAAAGGACAAAAGGCAGCGAATAGACGAAGGAGCCCGAGGCC
GACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAATACACCCCTACTTCAATCCCACTGGAGCAAATCTTGATGGAGATACAAAATACAAACCTTCTCAACGTGCCT
AGAAAGCTGAAGTCAAATCCTGATAACAGAGACAAAAGTCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTACATTCAGCTAAAGGACGAAATTGA
AGCGTTGATTCGGAATGGATACCTGAAGGAGTTCACCACAAAGGCCGAGGCAGACCAGAGATGGCCGAGGCCGACCAGAGATGACGCAGGCAAAGATAATGGTGGACCTC
CTCTGGAAATCCGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGCCAGAGAACAACGCAAGTCTCACATCAACCTCTTAACTATCAAACAGCAGCCAGGTGAGAGCTTGCGCGATTATATAACACGTTTTAACGAGGAAGCACTACA
GGAGTTGCTCAAGTCAAAGAAGTCGAAACGAGAACACAAGAGGTCTTCTTCATCTGACCACGACAGTAAAAAGGACAAAAGGCAGCGAATAGACGAAGGAGCCCGAGGCC
GACCAGACCAAGGAGACTACTTGAAGAAGTTTGAAAAATACACCCCTACTTCAATCCCACTGGAGCAAATCTTGATGGAGATACAAAATACAAACCTTCTCAACGTGCCT
AGAAAGCTGAAGTCAAATCCTGATAACAGAGACAAAAGTCAGTATTGTCTCTTCCATCGAGATCATGGACATTCAACTAGGAACTACATTCAGCTAAAGGACGAAATTGA
AGCGTTGATTCGGAATGGATACCTGAAGGAGTTCACCACAAAGGCCGAGGCAGACCAGAGATGGCCGAGGCCGACCAGAGATGACGCAGGCAAAGATAATGGTGGACCTC
CTCTGGAAATCCGTTGA
Protein sequenceShow/hide protein sequence
MGAREQRKSHINLLTIKQQPGESLRDYITRFNEEALQELLKSKKSKREHKRSSSSDHDSKKDKRQRIDEGARGRPDQGDYLKKFEKYTPTSIPLEQILMEIQNTNLLNVP
RKLKSNPDNRDKSQYCLFHRDHGHSTRNYIQLKDEIEALIRNGYLKEFTTKAEADQRWPRPTRDDAGKDNGGPPLEIR