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Lag0016066 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016066
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRNA-directed DNA polymerase (Reverse transcriptase)-related family protein
Genome locationchr12:32739430..32740225
RNA-Seq ExpressionLag0016066
SyntenyLag0016066
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022145148.1 uncharacterized protein LOC111014662 [Momordica charantia]6.9e-1551.47Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTP
        + +VLRG+YFK G+F+ A +G NPS+VWRSI+WG+ELF +G RW++G+G ++    +PWI + GS  P
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTP

XP_022145149.1 uncharacterized protein LOC111014663 [Momordica charantia]5.3e-1550.72Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPI
        + K LRG+YF+TG FLKA +G++PSY WRSI+W RELF++GY+W+VG+G +I   ++ WI +     P+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPI

XP_022155286.1 uncharacterized protein LOC111022423 [Momordica charantia]2.4e-2351.04Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFLNS---GDDVEVK
        +AK LRG+YFKTG FL+A +G  PSY WRSI+WGR+LFK+GYRWKVG+G +I  + +PW+P+ G+ +P+  H   +NFSVA  +      D+++V+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFLNS---GDDVEVK

XP_024038356.1 uncharacterized protein LOC112097383 [Citrus clementina]2.6e-1442.86Show/hide
Query:  AKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFLN
        A+VL+ RYF    F++A++G NPSY+WRSI+WGRE+ K+G RW++G G  I    + WIP+  +  PIT+ +      VA+ ++
Subjt:  AKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFLN

XP_030509050.1 uncharacterized protein LOC115723712 [Cannabis sativa]9.0e-1544.05Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFL
        +A+VL+ RYF TG FL+AT G  PS  W+SI+WG+EL  +G RW++GSG ++     PWIP   +  P+   S  ++  VA F+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFL

TrEMBL top hitse value%identityAlignment
A0A6J1CUD6 uncharacterized protein LOC1110146632.5e-1550.72Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPI
        + K LRG+YF+TG FLKA +G++PSY WRSI+W RELF++GY+W+VG+G +I   ++ WI +     P+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPI

A0A6J1CV63 uncharacterized protein LOC1110146623.3e-1551.47Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTP
        + +VLRG+YFK G+F+ A +G NPS+VWRSI+WG+ELF +G RW++G+G ++    +PWI + GS  P
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTP

A0A6J1DRA0 uncharacterized protein LOC1110224231.1e-2351.04Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFLNS---GDDVEVK
        +AK LRG+YFKTG FL+A +G  PSY WRSI+WGR+LFK+GYRWKVG+G +I  + +PW+P+ G+ +P+  H   +NFSVA  +      D+++V+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFLNS---GDDVEVK

A0A803NTN0 Uncharacterized protein3.7e-1444.05Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFL
        ++++L+ RYF    FL A IGH+PSY W+SI WGR+L  +G R+KVG+G NI   I+PWIP   +  P++    + + SV+ F+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFL

A0A803Q6Z2 Uncharacterized protein4.3e-1544.05Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFL
        +A+VL+ RYF TG FL+AT G  PS  W+SI+WG+EL  +G RW++GSG ++     PWIP   +  P+   S  ++  VA F+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFL

SwissProt top hitse value%identityAlignment
P93295 Uncharacterized mitochondrial protein AtMg003107.6e-0941.67Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWI
        ++++LR RYF     ++ ++G  PSY WRSII GREL  RG    +G GI+ +  ++ WI
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWI

Arabidopsis top hitse value%identityAlignment
AT4G29090.1 Ribonuclease H-like superfamily protein5.6e-0740Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWI
        MAKV + RYF     L A +G  PS+VW+SI   +E+ ++G R  VG+G +I    + W+
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWI

ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein5.4e-1041.67Show/hide
Query:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWI
        ++++LR RYF     ++ ++G  PSY WRSII GREL  RG    +G GI+ +  ++ WI
Subjt:  MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAGGTGCTCCGAGGAAGATACTTCAAAACAGGACATTTCCTCAAGGCGACGATAGGGCATAATCCGTCCTATGTTTGGAGAAGCATAATATGGGGGAGAGAATT
GTTTAAAAGAGGATACCGATGGAAGGTTGGTAGTGGTATTAATATAGAGGCAACTATTAATCCATGGATTCCTAAGGGAGGATCGTGTACGCCCATTACAATTCACTCGG
ATGCCCAAAACTTTTCTGTGGCCCAATTTTTAAACTCAGGAGATGATGTGGAAGTGAAGGCTCCTAAATCGACTACCCATCTTTTTTTGGAATGTAAAATGGTAAGGAAT
GTTTGGAGTCAGTTTTGTCCTCTGTCTAATGAAATTGAATCGAATAACAGGCAACCAGATACAGAGCAGTTGAAGCGAAAAGTCAAGAAATATTCTGAAGAATTTATTGA
GCAAAAGAAGGCAAACCTAATTCAAGAGCATCTTCCCATGGGTGACAGCGTGCAACACCAACAGAATCCACCTCCAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAAGGTGCTCCGAGGAAGATACTTCAAAACAGGACATTTCCTCAAGGCGACGATAGGGCATAATCCGTCCTATGTTTGGAGAAGCATAATATGGGGGAGAGAATT
GTTTAAAAGAGGATACCGATGGAAGGTTGGTAGTGGTATTAATATAGAGGCAACTATTAATCCATGGATTCCTAAGGGAGGATCGTGTACGCCCATTACAATTCACTCGG
ATGCCCAAAACTTTTCTGTGGCCCAATTTTTAAACTCAGGAGATGATGTGGAAGTGAAGGCTCCTAAATCGACTACCCATCTTTTTTTGGAATGTAAAATGGTAAGGAAT
GTTTGGAGTCAGTTTTGTCCTCTGTCTAATGAAATTGAATCGAATAACAGGCAACCAGATACAGAGCAGTTGAAGCGAAAAGTCAAGAAATATTCTGAAGAATTTATTGA
GCAAAAGAAGGCAAACCTAATTCAAGAGCATCTTCCCATGGGTGACAGCGTGCAACACCAACAGAATCCACCTCCAAGTTGA
Protein sequenceShow/hide protein sequence
MAKVLRGRYFKTGHFLKATIGHNPSYVWRSIIWGRELFKRGYRWKVGSGINIEATINPWIPKGGSCTPITIHSDAQNFSVAQFLNSGDDVEVKAPKSTTHLFLECKMVRN
VWSQFCPLSNEIESNNRQPDTEQLKRKVKKYSEEFIEQKKANLIQEHLPMGDSVQHQQNPPPS