CuGenDBv2

Gene ID	Lag0016076
Organism	Luffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description	SWIM-type domain-containing protein
Genome location	chr12:32873690..32874088
RNA-Seq Expression	Lag0016076
Synteny	Lag0016076
Gene Ontology terms	GO:0048507 - meristem development (biological process) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR006564 - Zinc finger, PMZ-type IPR007527 - Zinc finger, SWIM-type

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0036768.1 uncharacterized protein E6C27_scaffold20G00510 [Cucumis melo var. makuwa]

4.9e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKT  H  N+KGGN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+STY  CY+ +FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL  D  LLR+ GRPK+
Subjt:  PHNFLVLYADTKLLREPGRPKS

KAA0039601.1 uncharacterized protein E6C27_scaffold744G00780 [Cucumis melo var. makuwa]

6.3e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKTG H  N+K GN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+ TY  CY+P+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL +D  LLR+ GR KS
Subjt:  PHNFLVLYADTKLLREPGRPKS

KAA0066153.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]

1.5e-41

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDR   VFHVKTG H  NAKGGN+    L T  RYCSC KWQ F I C HFMA+CSR N+NYED IE YYKLSTY  C SP+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P    VL+ D  LLR+PG+PKS
Subjt:  PHNFLVLYADTKLLREPGRPKS

TYK01705.1 uncharacterized protein E5676_scaffold775G00280 [Cucumis melo var. makuwa]

6.3e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKTG H  N+K GN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+ TY  CY+P+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL +D  LLR+ GR KS
Subjt:  PHNFLVLYADTKLLREPGRPKS

XP_008457265.1 PREDICTED: uncharacterized protein LOC103496991 [Cucumis melo]

6.3e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKTG H  N+K GN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+ TY  CY+P+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL +D  LLR+ GR KS
Subjt:  PHNFLVLYADTKLLREPGRPKS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C4P2 uncharacterized protein LOC103496991

3.1e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKTG H  N+K GN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+ TY  CY+P+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL +D  LLR+ GR KS
Subjt:  PHNFLVLYADTKLLREPGRPKS

A0A5A7T1X8 SWIM-type domain-containing protein

2.3e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKT  H  N+KGGN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+STY  CY+ +FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL  D  LLR+ GRPK+
Subjt:  PHNFLVLYADTKLLREPGRPKS

A0A5A7TD93 SWIM-type domain-containing protein

3.1e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKTG H  N+K GN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+ TY  CY+P+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL +D  LLR+ GR KS
Subjt:  PHNFLVLYADTKLLREPGRPKS

A0A5A7VD99 Serine/threonine-protein phosphatase 7 long form-like protein

7.1e-42

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDR   VFHVKTG H  NAKGGN+    L T  RYCSC KWQ F I C HFMA+CSR N+NYED IE YYKLSTY  C SP+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P    VL+ D  LLR+PG+PKS
Subjt:  PHNFLVLYADTKLLREPGRPKS

A0A5D3BR89 SWIM-type domain-containing protein

3.1e-45

67.21

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Query:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT
        KHEV SYDRS G+FHVKTG H  N+K GN+   RL+   RYCSC KWQ FGIPCSHFMAVCSR N+NYED +EDYYK+ TY  CY+P+FQP+PHEDYWIT
Subjt:  KHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWIT

Query:  PHNFLVLYADTKLLREPGRPKS
        P +  VL +D  LLR+ GR KS
Subjt:  PHNFLVLYADTKLLREPGRPKS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G49920.1 MuDR family transposase

4.3e-07

35.09

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Query:  CSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYW
        C+C ++Q    PC H +AVC  L +N    ++D Y +  Y + YS +F P+P    W
Subjt:  CSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYW

AT1G64255.1 MuDR family transposase

3.1e-05

31.58

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Query:  CSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYW
        C+C  +Q +  PC H +AVC +L  N    ++D Y L    + Y+  F  +P    W
Subjt:  CSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYW

AT1G64260.1 MuDR family transposase

2.1e-06

29.51

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Query:  DIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYW
        ++  C+C K+Q++  PC H +AV  +L +N    +++ Y +  Y + Y+  F P+P    W
Subjt:  DIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYW

Sequences

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CDS sequence

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ATGGGCCACAAGATCAAGCACGAGGTGTTGTCATATGATCGATCCACTGGTGTATTTCACGTGAAAACTGGGCTTCATTATTTTAATGCCAAAGGAGGGAATCTTCATAC
TCAAAGGTTAACTACAGATATACGCTACTGTTCCTGCATTAAGTGGCAAACCTTTGGCATTCCATGTTCACATTTTATGGCAGTTTGCTCACGCTTGAATTTGAATTATG
AAGATCTCATTGAGGACTACTATAAGCTTTCAACGTATACTCAGTGCTACTCTCCTCGGTTTCAACCGATCCCCCATGAAGATTACTGGATCACCCCTCATAATTTCCTC
GTCCTATATGCTGACACAAAGTTGTTGAGAGAACCTGGTAGACCAAAAAGTTTCTCGCTAACACAATGA

mRNA sequence

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Protein sequence

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MGHKIKHEVLSYDRSTGVFHVKTGLHYFNAKGGNLHTQRLTTDIRYCSCIKWQTFGIPCSHFMAVCSRLNLNYEDLIEDYYKLSTYTQCYSPRFQPIPHEDYWITPHNFL
VLYADTKLLREPGRPKSFSLTQ

Lag0016076 (gene) of Sponge gourd (AG-4) v1 genome