; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016079 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016079
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:32914888..32917237
RNA-Seq ExpressionLag0016079
SyntenyLag0016079
Gene Ontology termsNA
InterPro domainsIPR000477 - Reverse transcriptase domain
IPR026960 - Reverse transcriptase zinc-binding domain
IPR043502 - DNA/RNA polymerase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BBG98819.1 VIRB2-interacting protein 2 [Prunus dulcis]7.2e-13637.34Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        +DRPFE EE+ RA+   G  K+ GPDGF+    ++ W+ +KEDL KV  +FF  GI+N  TNET+ICLIPKKK + KVSDFRPISLVT LYK++SKVLA 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL STI + Q AF++GRQI+DA L+A EVV++ R   + G V K+D EKAYD V+W F+D +L  KGF  RWR WI+GC  ++NFS++ING     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                       FL                      G + G   VE+SH+QFADDT+ F +    +  N    L  +   SG++IN  K S+VGIN+
Subjt:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        + G V  MA   GC V   P  YLG+ +GG P+   FWDPV+E +  +L  WK   +SKGGR T+I+AVL SIP YY S+FRIP+GVA  IEKL R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------
        +G DG S +H + W+ V      GGLG+ +LRA++ AL AKWLWRF  EP ALW ++I S YG                                     
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------

Query:  -----RRRFLEED---------------------------------------------------------------------------------------
             R RF E+D                                                                                       
Subjt:  -----RRRFLEED---------------------------------------------------------------------------------------

Query:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-
          C                QIW  + P +VK F+W   L  +NT D +Q+R P L +SP+ C +C    +S +HLLLHC F+ K+W     +  +++ I 
Subjt:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-

Query:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL
        + C  + + S   +ALG G    KAKVLW +  +A++W+LW ERN RIF D K +      D V+  A+ W++    F +  Y   M NL
Subjt:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL

BBN69746.1 VIRB2-interacting protein 2 [Prunus dulcis]7.2e-13637.34Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        +DRPFE EE+ RA+   G  K+ GPDGF+    ++ W+ +KEDL KV  +FF  GI+N  TNET+ICLIPKKK + KVSDFRPISLVT LYK++SKVLA 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL STI + Q AF++GRQI+DA L+A EVV++ R   + G V K+D EKAYD V+W F+D +L  KGF  RWR WI+GC  ++NFS++ING     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                       FL                      G + G   VE+SH+QFADDT+ F +    +  N    L  +   SG++IN  K S+VGIN+
Subjt:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        + G V  MA   GC V   P  YLG+ +GG P+   FWDPV+E +  +L  WK   +SKGGR T+I+AVL SIP YY S+FRIP+GVA  IEKL R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------
        +G DG S +H + W+ V      GGLG+ +LRA++ AL AKWLWRF  EP ALW ++I S YG                                     
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------

Query:  -----RRRFLEED---------------------------------------------------------------------------------------
             R RF E+D                                                                                       
Subjt:  -----RRRFLEED---------------------------------------------------------------------------------------

Query:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-
          C                QIW  + P +VK F+W   L  +NT D +Q+R P L +SP+ C +C    +S +HLLLHC F+ K+W     +  +++ I 
Subjt:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-

Query:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL
        + C  + + S   +ALG G    KAKVLW +  +A++W+LW ERN RIF D K +      D V+  A+ W++    F +  Y   M NL
Subjt:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL

CAN74004.1 hypothetical protein VITISV_006235 [Vitis vinifera]1.4e-13435.4Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        ++ PF  EEI +A+  L   K  GPDGFT    +  W+ IKEDL +VF EF  +GI+N+ TN ++I LIPKK ++ ++SDFRPISL+T LYKII+KVL+ 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL  TI  +Q AF++GRQI+DA+L+A E+VD+ R    +G V K+DFEKAYD V WDFLD +LE KGFSPRWRKW+ GC  S +F+IL+NG     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ------------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                                             L GF VG+    VSH+QFADDT+ F +     ++  K  L  +   SGL +N+ K+SI GIN+
Subjt:  ------------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        +   ++R+AE+L CK  G P  YLG+ +GG PK   FWDPV+E I ++L  W+   +S  GR TLI++ L+ +P+Y+ S+F++P  VA  IE+L R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRII---FSKYG-----------RRRFLE-----------------
         G       HL++WD V  P  +GGLG+ N+  +N AL+ KWLWR+ +E  ALW + I   F ++            R RF E                 
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRII---FSKYG-----------RRRFLE-----------------

Query:  ---------------------------------------------EDLCIQ----------------------------------------IWDGQAPKR
                                                     +DL +                                         +W+ Q P +
Subjt:  ---------------------------------------------EDLCIQ----------------------------------------IWDGQAPKR

Query:  VKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFR
        VK F+W +A   +NT D +Q R P   +SP++C++CM   ESA HL LHC     +W++   +  + +    S+   ++    G G   +  VLW     
Subjt:  VKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFR

Query:  AIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALDKVFSNYSVAMINLQWKA
        A+I  +W ERN+RIF DK+ +     D++   AS W+   K F    + +I L W A
Subjt:  AIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALDKVFSNYSVAMINLQWKA

CAN75040.1 hypothetical protein VITISV_026478 [Vitis vinifera]1.5e-13837.48Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        +DRPF  EE+ RA+  L   K  GPDGFT    +  W+ IKEDL +VF EF  NG++N+ TN T+I L+PKK  + K+SD+RPISLVT LYKII+KVL+ 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILIN------
        R+R VL  TI +SQ AF+EGR I+DA+L+A EVVD+ R    +G V K+DFEKAYD VDW FLD +L+ KGFS +WR WI+GC  SS+F+IL+N      
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILIN------

Query:  -----------------------------------GFLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                                           G   GF+VG++   VS +QFADDT+ F       ++N KI L  + + SGL IN++K++I GIN 
Subjt:  -----------------------------------GFLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
            ++ +A +  C+V   P +YLG+ +GG PK   FWDPV+E I  +L  WK   +S GGR TLI++ LS IP+Y+ S+F+IP  +A  IEK+ R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------
         G       HL++W+ VS P  LGGLG   +  +N AL+ KWLWRF +E   LW ++I S YG                                     
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------

Query:  -----RRRFLEE---------------------DLCIQ-------------IWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQA
             R RF E+                      L +              +W  + P +VK   W +A   +NT DK+Q R P   + P  C++C    
Subjt:  -----RRRFLEE---------------------DLCIQ-------------IWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQA

Query:  ESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALD
        ES  HL LHC     +WN+   + G+ +    S    L  A  G G   + K LW      ++W +W+ERN RIF DK  S     D +   ++ W++  
Subjt:  ESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALD

Query:  KVFSNYSVAMINLQW
          F    + +I L W
Subjt:  KVFSNYSVAMINLQW

RVW91328.1 LINE-1 retrotransposable element ORF2 protein [Vitis vinifera]1.8e-13435.76Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        +D PF   EI+ A+  L   K  GPDGFT    ++ W+ IKEDL +VF EF  +GI+N+ TN ++I L+PKK  + K+S+FRPISL+T LYKII+KVLA 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL  TI ++Q AF++GRQI+DA+L+A E+VD+ +    +G V K+DFEKAYD V+WDFLD +LE KGFSPRWR W++GC  S +++IL+NG     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ------------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                                             L GF VG+    VSH+QFADDT+LF       V+  K  L  + + SGL +N+ K+++ GIN+
Subjt:  ------------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        +   ++R+A +L CK    P  YLG+ +GG P    FWDPV+E I  +L  W+   +S GGR TL+ + LS IP+Y+ S+F+IP  VA  IE+L R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRII------FSKY--------GRRRFLE-----------------
         G       HL++W+ V  P  +GGLGI  +  +N AL+ KWLWRF +E  +LW   I      FSKY         R RF E                 
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRII------FSKY--------GRRRFLE-----------------

Query:  -----------------------------------EDL--------CIQ------------------------------------------IWDGQAPKR
                                           EDL        C+                                           +W  Q P +
Subjt:  -----------------------------------EDL--------CIQ------------------------------------------IWDGQAPKR

Query:  VKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFR
        VK F+W +A   +NT D +Q R P   ISPN+C +CM Q ESA HL LHC     +W++   +  + +    S+   +     G G   +  +LW N   
Subjt:  VKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFR

Query:  AIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALDKVFSNYSVAMINLQW
        A+IW +W+ERN+RIF DK+ +     D++   AS W+     F    + ++ L W
Subjt:  AIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALDKVFSNYSVAMINLQW

TrEMBL top hitse value%identityAlignment
A0A4Y1R3V4 VIRB2-interacting protein 23.5e-13637.34Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        +DRPFE EE+ RA+   G  K+ GPDGF+    ++ W+ +KEDL KV  +FF  GI+N  TNET+ICLIPKKK + KVSDFRPISLVT LYK++SKVLA 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL STI + Q AF++GRQI+DA L+A EVV++ R   + G V K+D EKAYD V+W F+D +L  KGF  RWR WI+GC  ++NFS++ING     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                       FL                      G + G   VE+SH+QFADDT+ F +    +  N    L  +   SG++IN  K S+VGIN+
Subjt:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        + G V  MA   GC V   P  YLG+ +GG P+   FWDPV+E +  +L  WK   +SKGGR T+I+AVL SIP YY S+FRIP+GVA  IEKL R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------
        +G DG S +H + W+ V      GGLG+ +LRA++ AL AKWLWRF  EP ALW ++I S YG                                     
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------

Query:  -----RRRFLEED---------------------------------------------------------------------------------------
             R RF E+D                                                                                       
Subjt:  -----RRRFLEED---------------------------------------------------------------------------------------

Query:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-
          C                QIW  + P +VK F+W   L  +NT D +Q+R P L +SP+ C +C    +S +HLLLHC F+ K+W     +  +++ I 
Subjt:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-

Query:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL
        + C  + + S   +ALG G    KAKVLW +  +A++W+LW ERN RIF D K +      D V+  A+ W++    F +  Y   M NL
Subjt:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL

A0A5H2Y6K0 VIRB2-interacting protein 23.5e-13637.34Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        +DRPFE EE+ RA+   G  K+ GPDGF+    ++ W+ +KEDL KV  +FF  GI+N  TNET+ICLIPKKK + KVSDFRPISLVT LYK++SKVLA 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL STI + Q AF++GRQI+DA L+A EVV++ R   + G V K+D EKAYD V+W F+D +L  KGF  RWR WI+GC  ++NFS++ING     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                       FL                      G + G   VE+SH+QFADDT+ F +    +  N    L  +   SG++IN  K S+VGIN+
Subjt:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        + G V  MA   GC V   P  YLG+ +GG P+   FWDPV+E +  +L  WK   +SKGGR T+I+AVL SIP YY S+FRIP+GVA  IEKL R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------
        +G DG S +H + W+ V      GGLG+ +LRA++ AL AKWLWRF  EP ALW ++I S YG                                     
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------

Query:  -----RRRFLEED---------------------------------------------------------------------------------------
             R RF E+D                                                                                       
Subjt:  -----RRRFLEED---------------------------------------------------------------------------------------

Query:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-
          C                QIW  + P +VK F+W   L  +NT D +Q+R P L +SP+ C +C    +S +HLLLHC F+ K+W     +  +++ I 
Subjt:  -LC---------------IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-

Query:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL
        + C  + + S   +ALG G    KAKVLW +  +A++W+LW ERN RIF D K +      D V+  A+ W++    F +  Y   M NL
Subjt:  QYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND-KSLSFNIFCDTVQLSASNWSALDKVFSN--YSVAMINL

A5B0H6 Reverse transcriptase domain-containing protein6.5e-13535.4Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        ++ PF  EEI +A+  L   K  GPDGFT    +  W+ IKEDL +VF EF  +GI+N+ TN ++I LIPKK ++ ++SDFRPISL+T LYKII+KVL+ 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL  TI  +Q AF++GRQI+DA+L+A E+VD+ R    +G V K+DFEKAYD V WDFLD +LE KGFSPRWRKW+ GC  S +F+IL+NG     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ------------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                                             L GF VG+    VSH+QFADDT+ F +     ++  K  L  +   SGL +N+ K+SI GIN+
Subjt:  ------------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        +   ++R+AE+L CK  G P  YLG+ +GG PK   FWDPV+E I ++L  W+   +S  GR TLI++ L+ +P+Y+ S+F++P  VA  IE+L R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRII---FSKYG-----------RRRFLE-----------------
         G       HL++WD V  P  +GGLG+ N+  +N AL+ KWLWR+ +E  ALW + I   F ++            R RF E                 
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRII---FSKYG-----------RRRFLE-----------------

Query:  ---------------------------------------------EDLCIQ----------------------------------------IWDGQAPKR
                                                     +DL +                                         +W+ Q P +
Subjt:  ---------------------------------------------EDLCIQ----------------------------------------IWDGQAPKR

Query:  VKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFR
        VK F+W +A   +NT D +Q R P   +SP++C++CM   ESA HL LHC     +W++   +  + +    S+   ++    G G   +  VLW     
Subjt:  VKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFR

Query:  AIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALDKVFSNYSVAMINLQWKA
        A+I  +W ERN+RIF DK+ +     D++   AS W+   K F    + +I L W A
Subjt:  AIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALDKVFSNYSVAMINLQWKA

A5BV95 Reverse transcriptase domain-containing protein7.5e-13937.48Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        +DRPF  EE+ RA+  L   K  GPDGFT    +  W+ IKEDL +VF EF  NG++N+ TN T+I L+PKK  + K+SD+RPISLVT LYKII+KVL+ 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILIN------
        R+R VL  TI +SQ AF+EGR I+DA+L+A EVVD+ R    +G V K+DFEKAYD VDW FLD +L+ KGFS +WR WI+GC  SS+F+IL+N      
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILIN------

Query:  -----------------------------------GFLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                                           G   GF+VG++   VS +QFADDT+ F       ++N KI L  + + SGL IN++K++I GIN 
Subjt:  -----------------------------------GFLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
            ++ +A +  C+V   P +YLG+ +GG PK   FWDPV+E I  +L  WK   +S GGR TLI++ LS IP+Y+ S+F+IP  +A  IEK+ R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------
         G       HL++W+ VS P  LGGLG   +  +N AL+ KWLWRF +E   LW ++I S YG                                     
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-------------------------------------

Query:  -----RRRFLEE---------------------DLCIQ-------------IWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQA
             R RF E+                      L +              +W  + P +VK   W +A   +NT DK+Q R P   + P  C++C    
Subjt:  -----RRRFLEE---------------------DLCIQ-------------IWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQA

Query:  ESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALD
        ES  HL LHC     +WN+   + G+ +    S    L  A  G G   + K LW      ++W +W+ERN RIF DK  S     D +   ++ W++  
Subjt:  ESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNWSALD

Query:  KVFSNYSVAMINLQW
          F    + +I L W
Subjt:  KVFSNYSVAMINLQW

M5XUF8 Reverse transcriptase domain-containing protein (Fragment)2.2e-13538.35Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        ++RPFE EE+ RA+   G  K+ GPDGF+    ++ W  +KEDL KV  +FF  GI+N  TNET+ICLIPKKK + KVSDFRPISLVT LYK++SKVLA 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----
        R+R VL STI + Q AF++GRQI+DA L+A EVV++ R   + G V K+D EKAYD V+W F+D +L  KGF  RWR WI+GC  ++NFS++ING     
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING-----

Query:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM
                       FL                      G + G   VEVSH+QFADDT+ F +    +  N    L  +   SG+ IN  K S+VGIN+
Subjt:  ---------------FL---------------------RGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINM

Query:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW
        + G +  +A   GC+V   P +YLG+ +GG P+   FWDPV+E +  +L  WK   +SKGGR T+I+AVL SIP YY S+FRIP+GVA  IEKL R FLW
Subjt:  EAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLW

Query:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-----------------------------RRRFLEED
        +G D    +H + W+ V      GGLG+ +LRA++AAL AKWLWRF  EP ALW ++I S YG                             R RF E+D
Subjt:  KGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYG-----------------------------RRRFLEED

Query:  ----------------------------------------------------------------------------------------LC----------
                                                                                                 C          
Subjt:  ----------------------------------------------------------------------------------------LC----------

Query:  -----IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-QYCKSYSVVSWLT
              QIW  + P +VK F+W   L  +NT D +Q+R P L ISP+ C +C    ES  HLLLHC F+ K+W     +  +++ I + C  + + S   
Subjt:  -----IQIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVW----NQFGSIFGI-QYCKSYSVVSWLT

Query:  EALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND
        +ALG G    KAK+LW +  +A++W+LW ERN RIF D
Subjt:  EALGGGGLKGKAKVLWCNCFRAIIWHLWKERNSRIFND

SwissProt top hitse value%identityAlignment
O00370 LINE-1 retrotransposable element ORF2 protein2.0e-3225.38Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKK-KVAAKVSDFRPISLVTLLYKIISKVLA
        ++RP    EI   ++ L   K+ GPDGFT EF +     +   L K+FQ   + GIL     E  I LIPK  +   K  +FRPISL+ +  KI++K+LA
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKK-KVAAKVSDFRPISLVTLLYKIISKVLA

Query:  ERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDY-RVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING---
         RI+  +   I + Q+ FI G Q    I  +  V+    R + +   +I +D EKA+DK+   F+   L   G    + K I+        +I++NG   
Subjt:  ERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDY-RVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILING---

Query:  -----------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINME
                                            ++G  +G+EEV++S   FADD +++ +      +N    +S + K SG  IN+QK+     N  
Subjt:  -----------------------------------FLRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINME

Query:  AGEVARMAEILGCKVEGLPFNYLGV--TVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSI--FRIPVGVAKNIEKLFRR
            +++   L   +      YLG+  T   +      + P+L+ I      WK    S  GR  ++K  +     Y F+    ++P+     +EK   +
Subjt:  AGEVARMAEILGCKVEGLPFNYLGV--TVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSI--FRIPVGVAKNIEKLFRR

Query:  FLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAK--WLWRFDKEPDALWRR
        F+W           I    +S     GG+ + + +    A + K  W W  +++ D  W R
Subjt:  FLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAK--WLWRFDKEPDALWRR

P08548 LINE-1 reverse transcriptase homolog7.2e-3025.05Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFEN----GILNRRTNETYICLIPKK-KVAAKVSDFRPISLVTLLYKIIS
        ++RP    EI   +  L   K+ GPDGFT EF    + T KE+L  +    F+N    GIL     E  I LIPK  K   +  ++RPISL+ +  KI++
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFEN----GILNRRTNETYICLIPKK-KVAAKVSDFRPISLVTLLYKIIS

Query:  KVLAERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKG-FVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILIN
        K+L  RI+  +   I + Q+ FI G Q    I  +  V+      K K   ++ +D EKA+D +   F+   L+  G    + K I+        +I++N
Subjt:  KVLAERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKG-FVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILIN

Query:  GF--------------------------------------LRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKT-SIV
        G                                       ++G ++G EE+++S   FADD +++ +            +  Y   SG  IN  K+ + +
Subjt:  GF--------------------------------------LRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKT-SIV

Query:  GINMEAGEVARMAEILGCKVEGLPFNYLGV--TVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRI--PVGVAKNIE
          N    E   + + +   V      YLGV  T   +      ++ + + I   +  WK    S  GR  ++K  +     Y F+   I  P+   K++E
Subjt:  GINMEAGEVARMAEILGCKVEGLPFNYLGV--TVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRI--PVGVAKNIE

Query:  KLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAK--WLWRFDKEPDALWRRI
        K+   F+W           I    +S     GG+ + +LR    +++ K  W W  ++E D +W RI
Subjt:  KLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAK--WLWRFDKEPDALWRRI

P0C2F6 Putative ribonuclease H protein At1g657501.1e-1736.07Show/hide
Query:  VLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIA
        +LE + ++++ W+   +S  GR TL KAVLSS+P +  S   +P  +   +++L R FLW         HL+KW  V +P   GGLG+   ++ N ALI+
Subjt:  VLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIA

Query:  KWLWRFDKEPDALWRRIIFSKY
        K  WR  +E ++LW  ++  KY
Subjt:  KWLWRFDKEPDALWRRIIFSKY

P11369 LINE-1 retrotransposable element ORF2 protein1.2e-2925.43Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFE----NGILNRRTNETYICLIPK-KKVAAKVSDFRPISLVTLLYKIIS
        ++ P   +EI   ++ L   K+ GPDGF+ EF    + T KEDL  +  + F      G L     E  I LIPK +K   K+ +FRPISL+ +  KI++
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFE----NGILNRRTNETYICLIPK-KKVAAKVSDFRPISLVTLLYKIIS

Query:  KVLAERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDY-RVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIK-------------
        K+LA RI+  + + I   Q+ FI G Q    I  +  V+    +++ +   +I +D EKA+DK+   F+  +LE  G    +   IK             
Subjt:  KVLAERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDY-RVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIK-------------

Query:  ---------------GCCLSSN-FSILINGF---------LRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVG
                       GC LS   F+I++            ++G  +G+EEV++S +  ADD +++     +  +     ++ + +  G  IN  K+    
Subjt:  ---------------GCCLSSN-FSILINGF---------LRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVG

Query:  INMEAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWD----PVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSI--FRIPVGVAKNI
                  + E     +      YLGVT+    +V   +D     + + I   L  WK    S  GR  ++K  +     Y F+    +IP      +
Subjt:  INMEAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWD----PVLEAIHTKLALWKGFLISKGGRTTLIKAVLSSIPAYYFSI--FRIPVGVAKNI

Query:  EKLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAK--WLWRFDKEPDALWRRI
        E    +F+W          L+K    S     GG+ + +L+    A++ K  W W  D++ D  W RI
Subjt:  EKLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAK--WLWRFDKEPDALWRRI

P14381 Transposon TX1 uncharacterized 149 kDa protein1.4e-2824.84Show/hide
Query:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE
        ++ P   +E+ +AL ++  +K+ G DG T EF +  W+T+  D  +V  E F+ G L        + L+PKK     + ++RP+SL++  YKI++K ++ 
Subjt:  MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAE

Query:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIK-------------------
        R+++VL   I   Q   + GR I D + L  +++   R        + +D EKA+D+VD  +L   L+A  F P++  ++K                   
Subjt:  RIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIK-------------------

Query:  ---------GCCLSSN-FSILINGF-------LRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINMEAGEV
                 GC LS   +S+ I  F       L G  + + ++ V    +ADD +L         +  +     Y  AS   IN  K+S  G+   + +V
Subjt:  ---------GCCLSSN-FSILINGF-------LRGFNVGQEEVEVSHIQFADDTLLFCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINMEAGEV

Query:  ARMAEIL-GCKVEGLPFNYLGVTVGGRP-KVASFWDPVLEAIHTKLALWKGF--LISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLWK
          +         E     YLGV +      V+  +  + E + T+L  WKGF  ++S  GR  +I  +++S   Y              I++    FLW 
Subjt:  ARMAEIL-GCKVEGLPFNYLGVTVGGRP-KVASFWDPVLEAIHTKLALWKGF--LISKGGRTTLIKAVLSSIPAYYFSIFRIPVGVAKNIEKLFRRFLWK

Query:  GGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRF-DKEPDALWRRIIFSKYGRRRFLEED
              G H +     S PL  GG G+  +R++      + + R+   +P   W  +  S Y + R +  D
Subjt:  GGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRF-DKEPDALWRRIIFSKYGRRRFLEED

Arabidopsis top hitse value%identityAlignment
AT1G10000.1 Ribonuclease H-like superfamily protein2.3e-0730.71Show/hide
Query:  RVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWN----QFGSI-FGIQYCKSYSVVSWLTEALGGGGLKGKAKVL
        ++K FLW  A   +    ++ +R  S   S   C  C    E+++H+L HCDFA +VWN    Q G I  G    ++ +++   T  L   G+       
Subjt:  RVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWN----QFGSI-FGIQYCKSYSVVSWLTEALGGGGLKGKAKVL

Query:  WCNCFRAIIWHLWKERNSRIFNDKSLS
        W      I WH+WK RN  IF +   S
Subjt:  WCNCFRAIIWHLWKERNSRIFNDKSLS

AT1G43760.1 DNAse I-like superfamily protein1.4e-1242.05Show/hide
Query:  EEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIIS
        +EI  A+  +  +K  GPD FT EF   SW  +K+      +EFF  G L +R N T I LIPK     ++S FRP+S  T++YKII+
Subjt:  EEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIIS

AT3G25270.1 Ribonuclease H-like superfamily protein7.2e-0926.71Show/hide
Query:  QIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGK
        +IW  +   ++K FLW L    + T D +++R   ++  P  C  C  + E++ HL   C +A +VW   G I   +   +   +    E L    L  +
Subjt:  QIWDGQAPKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGK

Query:  AKVLWCNCFRAIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNW
           L+ N    I+W LWK RN  +F  KS+S+       +     W
Subjt:  AKVLWCNCFRAIIWHLWKERNSRIFNDKSLSFNIFCDTVQLSASNW

AT4G20520.1 RNA binding;RNA-directed DNA polymerases7.9e-0834.94Show/hide
Query:  LAERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKG----FVIKVDFEKAYDKVDWDFLDFILEAKGFSPRW
        + ER++ ++ + I  +Q +FI GR   D I+   E V  + +R++KG     ++K+D EKAYD++ WD+L+  L + GF   W
Subjt:  LAERIRAVLPSTIDNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKG----FVIKVDFEKAYDKVDWDFLDFILEAKGFSPRW

AT4G29090.1 Ribonuclease H-like superfamily protein1.1e-0930.77Show/hide
Query:  SIPAYYFSIFRIPVGVAKNIEKLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKY
        ++P Y  + F +P  V K I  +   F W+      G H   WD +S     GG+G  ++ A N AL+ K +WR    P++L  ++  S+Y
Subjt:  SIPAYYFSIFRIPVGVAKNIEKLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGACCCTTTGAGAGGGAGGAAATATGGAGGGCTTTGTCGGTTCTTGGAGCTCATAAAACCCTTGGTCCTGATGGATTTACAGGGGAATTTTTAAAAAATTCTTG
GAACACCATTAAGGAAGACTTGTTTAAGGTGTTCCAGGAGTTTTTTGAGAATGGCATCCTTAACAGAAGAACCAATGAAACTTACATCTGTTTGATCCCGAAGAAAAAAG
TGGCTGCAAAGGTTAGTGATTTTCGCCCCATCAGCTTAGTAACTTTGCTTTATAAAATCATCTCTAAAGTGCTAGCTGAAAGAATTAGAGCGGTCCTTCCATCCACGATT
GACAATTCTCAGATTGCCTTTATAGAAGGTAGACAAATCATGGATGCCATTCTGCTAGCTGCTGAGGTCGTTGATGATTACCGTGTCAGAAAGAGAAAAGGCTTTGTTAT
CAAAGTTGATTTTGAGAAGGCTTATGATAAGGTCGACTGGGATTTCCTAGACTTTATTCTTGAGGCTAAAGGGTTCAGTCCTAGGTGGAGGAAGTGGATTAAAGGATGCT
GCTTAAGCTCCAATTTTTCTATTTTGATAAATGGCTTCCTTAGAGGCTTTAATGTCGGTCAAGAGGAGGTGGAGGTGTCTCACATCCAATTTGCAGACGACACCCTTTTG
TTTTGCGATGGTCACACTCACTTTGTGAAGAACTGGAAGATCTTCCTGAGTTTCTATGAAAAAGCCTCTGGGCTCTCTATCAATATGCAGAAGACCAGCATTGTCGGTAT
TAATATGGAGGCAGGGGAAGTGGCTCGTATGGCTGAGATTTTAGGATGTAAAGTTGAGGGCCTTCCTTTTAATTATCTGGGAGTTACTGTTGGGGGTAGACCTAAGGTGG
CTTCTTTCTGGGATCCGGTTCTGGAAGCTATCCACACAAAGCTCGCTCTCTGGAAGGGCTTTCTGATCTCCAAAGGGGGTAGAACAACTCTCATTAAAGCTGTGCTTTCA
AGCATTCCAGCTTACTACTTCTCCATTTTCAGAATTCCAGTGGGTGTTGCCAAGAATATTGAAAAACTTTTCAGAAGGTTTCTGTGGAAGGGGGGCGATGGTATTAGTGG
TTCACATTTGATTAAATGGGATTTTGTCTCTACTCCCCTATTACTTGGAGGTTTGGGCATAGATAATCTCCGAGCCAAAAATGCTGCCCTTATAGCAAAATGGTTGTGGA
GATTTGATAAGGAGCCCGATGCGTTGTGGAGAAGAATCATATTCAGCAAATATGGGAGGAGACGATTCTTGGAGGAAGATCTATGCATTCAAATCTGGGATGGGCAGGCT
CCGAAGAGAGTAAAATTCTTCCTATGGTCTTTGGCTCTCAGTGGTATTAATACTATGGATAAAGTTCAAAAAAGATTTCCCTCTCTTCAAATATCCCCTAATGTGTGTGT
GATGTGCATGACGCAAGCAGAATCGGCCTCCCACCTCTTGTTGCATTGTGATTTCGCTGACAAGGTGTGGAACCAGTTTGGAAGTATCTTTGGTATACAATATTGCAAGT
CGTATAGTGTGGTCAGTTGGTTGACAGAAGCCCTTGGTGGTGGCGGTCTGAAAGGAAAAGCTAAAGTCCTGTGGTGTAATTGTTTTAGAGCTATCATTTGGCACTTATGG
AAGGAAAGAAATTCGAGGATCTTCAACGACAAATCGTTATCGTTTAATATTTTTTGTGATACTGTACAGCTCTCAGCCTCTAATTGGAGTGCCTTAGATAAAGTTTTCTC
TAATTACTCTGTTGCCATGATTAACCTTCAATGGAAGGCGTTTTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATAGACCCTTTGAGAGGGAGGAAATATGGAGGGCTTTGTCGGTTCTTGGAGCTCATAAAACCCTTGGTCCTGATGGATTTACAGGGGAATTTTTAAAAAATTCTTG
GAACACCATTAAGGAAGACTTGTTTAAGGTGTTCCAGGAGTTTTTTGAGAATGGCATCCTTAACAGAAGAACCAATGAAACTTACATCTGTTTGATCCCGAAGAAAAAAG
TGGCTGCAAAGGTTAGTGATTTTCGCCCCATCAGCTTAGTAACTTTGCTTTATAAAATCATCTCTAAAGTGCTAGCTGAAAGAATTAGAGCGGTCCTTCCATCCACGATT
GACAATTCTCAGATTGCCTTTATAGAAGGTAGACAAATCATGGATGCCATTCTGCTAGCTGCTGAGGTCGTTGATGATTACCGTGTCAGAAAGAGAAAAGGCTTTGTTAT
CAAAGTTGATTTTGAGAAGGCTTATGATAAGGTCGACTGGGATTTCCTAGACTTTATTCTTGAGGCTAAAGGGTTCAGTCCTAGGTGGAGGAAGTGGATTAAAGGATGCT
GCTTAAGCTCCAATTTTTCTATTTTGATAAATGGCTTCCTTAGAGGCTTTAATGTCGGTCAAGAGGAGGTGGAGGTGTCTCACATCCAATTTGCAGACGACACCCTTTTG
TTTTGCGATGGTCACACTCACTTTGTGAAGAACTGGAAGATCTTCCTGAGTTTCTATGAAAAAGCCTCTGGGCTCTCTATCAATATGCAGAAGACCAGCATTGTCGGTAT
TAATATGGAGGCAGGGGAAGTGGCTCGTATGGCTGAGATTTTAGGATGTAAAGTTGAGGGCCTTCCTTTTAATTATCTGGGAGTTACTGTTGGGGGTAGACCTAAGGTGG
CTTCTTTCTGGGATCCGGTTCTGGAAGCTATCCACACAAAGCTCGCTCTCTGGAAGGGCTTTCTGATCTCCAAAGGGGGTAGAACAACTCTCATTAAAGCTGTGCTTTCA
AGCATTCCAGCTTACTACTTCTCCATTTTCAGAATTCCAGTGGGTGTTGCCAAGAATATTGAAAAACTTTTCAGAAGGTTTCTGTGGAAGGGGGGCGATGGTATTAGTGG
TTCACATTTGATTAAATGGGATTTTGTCTCTACTCCCCTATTACTTGGAGGTTTGGGCATAGATAATCTCCGAGCCAAAAATGCTGCCCTTATAGCAAAATGGTTGTGGA
GATTTGATAAGGAGCCCGATGCGTTGTGGAGAAGAATCATATTCAGCAAATATGGGAGGAGACGATTCTTGGAGGAAGATCTATGCATTCAAATCTGGGATGGGCAGGCT
CCGAAGAGAGTAAAATTCTTCCTATGGTCTTTGGCTCTCAGTGGTATTAATACTATGGATAAAGTTCAAAAAAGATTTCCCTCTCTTCAAATATCCCCTAATGTGTGTGT
GATGTGCATGACGCAAGCAGAATCGGCCTCCCACCTCTTGTTGCATTGTGATTTCGCTGACAAGGTGTGGAACCAGTTTGGAAGTATCTTTGGTATACAATATTGCAAGT
CGTATAGTGTGGTCAGTTGGTTGACAGAAGCCCTTGGTGGTGGCGGTCTGAAAGGAAAAGCTAAAGTCCTGTGGTGTAATTGTTTTAGAGCTATCATTTGGCACTTATGG
AAGGAAAGAAATTCGAGGATCTTCAACGACAAATCGTTATCGTTTAATATTTTTTGTGATACTGTACAGCTCTCAGCCTCTAATTGGAGTGCCTTAGATAAAGTTTTCTC
TAATTACTCTGTTGCCATGATTAACCTTCAATGGAAGGCGTTTTTGTAG
Protein sequenceShow/hide protein sequence
MDRPFEREEIWRALSVLGAHKTLGPDGFTGEFLKNSWNTIKEDLFKVFQEFFENGILNRRTNETYICLIPKKKVAAKVSDFRPISLVTLLYKIISKVLAERIRAVLPSTI
DNSQIAFIEGRQIMDAILLAAEVVDDYRVRKRKGFVIKVDFEKAYDKVDWDFLDFILEAKGFSPRWRKWIKGCCLSSNFSILINGFLRGFNVGQEEVEVSHIQFADDTLL
FCDGHTHFVKNWKIFLSFYEKASGLSINMQKTSIVGINMEAGEVARMAEILGCKVEGLPFNYLGVTVGGRPKVASFWDPVLEAIHTKLALWKGFLISKGGRTTLIKAVLS
SIPAYYFSIFRIPVGVAKNIEKLFRRFLWKGGDGISGSHLIKWDFVSTPLLLGGLGIDNLRAKNAALIAKWLWRFDKEPDALWRRIIFSKYGRRRFLEEDLCIQIWDGQA
PKRVKFFLWSLALSGINTMDKVQKRFPSLQISPNVCVMCMTQAESASHLLLHCDFADKVWNQFGSIFGIQYCKSYSVVSWLTEALGGGGLKGKAKVLWCNCFRAIIWHLW
KERNSRIFNDKSLSFNIFCDTVQLSASNWSALDKVFSNYSVAMINLQWKAFL