; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016090 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016090
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:32984504..32985425
RNA-Seq ExpressionLag0016090
SyntenyLag0016090
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022144467.1 uncharacterized protein LOC111014147 [Momordica charantia]5.8e-5946.92Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE
        MK    KR++++YC+FH+ HGH T +C  L++++E LI+ GYLKE+V       P++T  +    + +P  EI+TI+ GP   +S +KRKA  REAR   
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE

Query:  EKSIFSVDFKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGEGQNVVTRMINFLVV
        E++                   IAN  VHRVL+DGGS AD+LS   + AM LG + L+ S APLVGFGGE+V+PEG IE  VTFG G   VT+M++ LVV
Subjt:  EKSIFSVDFKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGEGQNVVTRMINFLVV

Query:  DCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNK
        +  S+YNAILGRP +H L+ + STYHQ +KFPT  G+G ++GEQ+ SRECY+T++R+ ++
Subjt:  DCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNK

XP_022152029.1 uncharacterized protein LOC111019838 [Momordica charantia]1.3e-5843.4Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVARE
        ++ DP+KRN++KYC FH++HGH T +C +L+  +E+LI++GY K+FV G+ ++      EER R          P  I TI  GP+GG+S  KR  +AR 
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVARE

Query:  ARE-----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV
        AR       E++  F + F          PHNDALV++  I +  V RVL+DGG+SA++LS   ++ +   R +L+ S+ PLVGF GE + PEG I+L V
Subjt:  ARE-----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV

Query:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDSWAD
        TFG+ +  VT+M  F+V+D  SAYNAI GRP +H  + V ST HQ+LK+ T  G+G+VRGEQ ASRECY + L+ ++  A +  +  D
Subjt:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDSWAD

XP_022155866.1 uncharacterized protein LOC111022880 [Momordica charantia]4.9e-5845.56Show/hide
Query:  PDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVAREARE-
        P++R+++KYC FH+ HGH T +C +L+  +E+LI++GY K+FV G+        +EER R    P     P  I TI  GP+GG+S  KRK +AR AR  
Subjt:  PDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVAREARE-

Query:  ----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGE
             E+     + F G        PHNDAL+++L I +  V RVL++GG+SA++LS   ++A+   R +LR S  PLVGF GE V+PEG I+L VT G+
Subjt:  ----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGE

Query:  GQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLR
         Q  +T+M  F+VVD  S YNAI GRP +H  + + ST HQ+LK+PT  G+G VRGEQ ASRECY   L+
Subjt:  GQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLR

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]1.1e-6044.91Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE
        MK  P+KR++ +YC+FH++HGH T +C  L++++E LI+ GYLKE+V       P++T    +  + +P  EI+TI  GP   +  +KRKA  +EAR   
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE

Query:  EK-SIFSVDFKG-----------------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV
            ++   F G                 PHNDALV++L I N  VHR+L+DGGSS  ++S   + AM LG + L+ ++APLVGFGGE+V+ +  I+L V
Subjt:  EK-SIFSVDFKG-----------------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV

Query:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDS
        TFG G   +T+++ FLVVD +S+YNAILGRP +H LK + STYH+ LKFPTD GI  V+GEQ+ S ECY+T+LR  +   R S S
Subjt:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDS

XP_030950020.1 uncharacterized protein LOC115973918 [Quercus lobata]1.1e-5745.85Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRG----NNAPPL-EIKTILRGPAGGKSNQKRKAVAR-
        +K DP+KRNRNKYC FH++HGH T  C  L+  +ENLI++G L+ F+        R  R+E+ +G    ++ PPL EI+ I+ G + G+S++ +KA  + 
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRG----NNAPPL-EIKTILRGPAGGKSNQKRKAVAR-

Query:  -----------EARELEEKSIFSVD-----FKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSI
                    A  ++E++I   D        PH+DALV+SL IAN    RVL+D GSSAD+L    F  M+LGR++LRP  +PLVGFGG KV P G+I
Subjt:  -----------EARELEEKSIFSVD-----FKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSI

Query:  ELSVTFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTL
         LSV  G     +T+ +NFLVVDC S+YNAI+GRP L+  K V STY+  +KFPT+ G+G V+G+Q A+RECY   L
Subjt:  ELSVTFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTL

TrEMBL top hitse value%identityAlignment
A0A6J1CTS4 uncharacterized protein LOC1110141472.8e-5946.92Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE
        MK    KR++++YC+FH+ HGH T +C  L++++E LI+ GYLKE+V       P++T  +    + +P  EI+TI+ GP   +S +KRKA  REAR   
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE

Query:  EKSIFSVDFKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGEGQNVVTRMINFLVV
        E++                   IAN  VHRVL+DGGS AD+LS   + AM LG + L+ S APLVGFGGE+V+PEG IE  VTFG G   VT+M++ LVV
Subjt:  EKSIFSVDFKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGEGQNVVTRMINFLVV

Query:  DCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNK
        +  S+YNAILGRP +H L+ + STYHQ +KFPT  G+G ++GEQ+ SRECY+T++R+ ++
Subjt:  DCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNK

A0A6J1DET8 uncharacterized protein LOC1110198386.3e-5943.4Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVARE
        ++ DP+KRN++KYC FH++HGH T +C +L+  +E+LI++GY K+FV G+ ++      EER R          P  I TI  GP+GG+S  KR  +AR 
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVARE

Query:  ARE-----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV
        AR       E++  F + F          PHNDALV++  I +  V RVL+DGG+SA++LS   ++ +   R +L+ S+ PLVGF GE + PEG I+L V
Subjt:  ARE-----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV

Query:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDSWAD
        TFG+ +  VT+M  F+V+D  SAYNAI GRP +H  + V ST HQ+LK+ T  G+G+VRGEQ ASRECY + L+ ++  A +  +  D
Subjt:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDSWAD

A0A6J1DP33 uncharacterized protein LOC1110228861.7e-5645Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE
        MK  P KR++ +Y +FH++HGH T +C  L++++E LI+ GYLKE+V       P++T +  +  +N+P  EI+TI+          + +    E  E E
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE

Query:  EKSIFSVDFKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGEGQNVVTRMINFLVV
           +F      PHNDALV++L IANA VHR+L+DGGSS  ++S   + AM LG + L+ S  PLVGFGGE+V+PEG IEL V FG G   + +M++FLVV
Subjt:  EKSIFSVDFKGPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGEGQNVVTRMINFLVV

Query:  DCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNK
           S+YN ILGRP +H LK++ STYHQ +KFPT  GIG ++GEQ+  RECY  +++  ++
Subjt:  DCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNK

A0A6J1DT04 uncharacterized protein LOC1110228802.4e-5845.56Show/hide
Query:  PDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVAREARE-
        P++R+++KYC FH+ HGH T +C +L+  +E+LI++GY K+FV G+        +EER R    P     P  I TI  GP+GG+S  KRK +AR AR  
Subjt:  PDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAP-----PLEIKTILRGPAGGKSNQKRKAVAREARE-

Query:  ----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGE
             E+     + F G        PHNDAL+++L I +  V RVL++GG+SA++LS   ++A+   R +LR S  PLVGF GE V+PEG I+L VT G+
Subjt:  ----LEEKSIFSVDFKG--------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGE

Query:  GQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLR
         Q  +T+M  F+VVD  S YNAI GRP +H  + + ST HQ+LK+PT  G+G VRGEQ ASRECY   L+
Subjt:  GQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLR

A0A6J1DV51 uncharacterized protein LOC1110246625.1e-6144.91Show/hide
Query:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE
        MK  P+KR++ +YC+FH++HGH T +C  L++++E LI+ GYLKE+V       P++T    +  + +P  EI+TI  GP   +  +KRKA  +EAR   
Subjt:  MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELE

Query:  EK-SIFSVDFKG-----------------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV
            ++   F G                 PHNDALV++L I N  VHR+L+DGGSS  ++S   + AM LG + L+ ++APLVGFGGE+V+ +  I+L V
Subjt:  EK-SIFSVDFKG-----------------PHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSV

Query:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDS
        TFG G   +T+++ FLVVD +S+YNAILGRP +H LK + STYH+ LKFPTD GI  V+GEQ+ S ECY+T+LR  +   R S S
Subjt:  TFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKDVASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATTTGATCCTGACAAGAGGAATAGGAATAAGTATTGCATGTTCCATAAGAACCATGGACACACCACGCACAATTGCATACAGCTGCGAGATGATTTAGAAAACCT
TATCAAAGAGGGATATCTGAAGGAGTTTGTCTGGGGAGAGGGGAAAAACAGGCCAAGGTCGACCAGAGAGGAACGTGACAGAGGGAATAATGCCCCACCACTAGAAATCA
AGACTATTTTGAGAGGACCAGCAGGAGGAAAGTCGAATCAGAAAAGAAAAGCAGTAGCTCGAGAGGCAAGGGAACTTGAAGAAAAAAGTATATTCAGTGTGGATTTCAAA
GGACCTCATAATGATGCACTGGTGGTAAGTTTGACGATTGCCAATGCCTGGGTTCACCGAGTTTTGATTGATGGTGGGAGTTCAGCGGATGTTCTATCTTCGAAAGTGTT
TGTAGCCATGAAGTTAGGAAGAGAGCGATTGAGACCAAGTGTAGCACCACTAGTTGGCTTTGGGGGAGAAAAAGTAATGCCAGAAGGAAGCATAGAGTTGTCAGTAACTT
TTGGGGAAGGGCAGAATGTAGTGACGAGAATGATCAACTTTCTGGTAGTAGACTGCAATTCTGCTTACAACGCTATTTTGGGAAGGCCAGCGCTGCATGAATTGAAGGAT
GTCGCATCAACCTACCACCAAATATTGAAATTCCCTACTGACAAAGGAATAGGGGTAGTGCGAGGGGAACAAAAGGCTTCCCGGGAATGTTACTTCACAACACTCAGAGA
AACGAACAAACAAGCGAGACAATCTGACTCATGGGCAGACGAGAGACGAGATCGACCAGGCCAAGGCCAAACAGGGGAACATTCCTCGCCCATGGAACACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATTTGATCCTGACAAGAGGAATAGGAATAAGTATTGCATGTTCCATAAGAACCATGGACACACCACGCACAATTGCATACAGCTGCGAGATGATTTAGAAAACCT
TATCAAAGAGGGATATCTGAAGGAGTTTGTCTGGGGAGAGGGGAAAAACAGGCCAAGGTCGACCAGAGAGGAACGTGACAGAGGGAATAATGCCCCACCACTAGAAATCA
AGACTATTTTGAGAGGACCAGCAGGAGGAAAGTCGAATCAGAAAAGAAAAGCAGTAGCTCGAGAGGCAAGGGAACTTGAAGAAAAAAGTATATTCAGTGTGGATTTCAAA
GGACCTCATAATGATGCACTGGTGGTAAGTTTGACGATTGCCAATGCCTGGGTTCACCGAGTTTTGATTGATGGTGGGAGTTCAGCGGATGTTCTATCTTCGAAAGTGTT
TGTAGCCATGAAGTTAGGAAGAGAGCGATTGAGACCAAGTGTAGCACCACTAGTTGGCTTTGGGGGAGAAAAAGTAATGCCAGAAGGAAGCATAGAGTTGTCAGTAACTT
TTGGGGAAGGGCAGAATGTAGTGACGAGAATGATCAACTTTCTGGTAGTAGACTGCAATTCTGCTTACAACGCTATTTTGGGAAGGCCAGCGCTGCATGAATTGAAGGAT
GTCGCATCAACCTACCACCAAATATTGAAATTCCCTACTGACAAAGGAATAGGGGTAGTGCGAGGGGAACAAAAGGCTTCCCGGGAATGTTACTTCACAACACTCAGAGA
AACGAACAAACAAGCGAGACAATCTGACTCATGGGCAGACGAGAGACGAGATCGACCAGGCCAAGGCCAAACAGGGGAACATTCCTCGCCCATGGAACACTGA
Protein sequenceShow/hide protein sequence
MKFDPDKRNRNKYCMFHKNHGHTTHNCIQLRDDLENLIKEGYLKEFVWGEGKNRPRSTREERDRGNNAPPLEIKTILRGPAGGKSNQKRKAVAREARELEEKSIFSVDFK
GPHNDALVVSLTIANAWVHRVLIDGGSSADVLSSKVFVAMKLGRERLRPSVAPLVGFGGEKVMPEGSIELSVTFGEGQNVVTRMINFLVVDCNSAYNAILGRPALHELKD
VASTYHQILKFPTDKGIGVVRGEQKASRECYFTTLRETNKQARQSDSWADERRDRPGQGQTGEHSSPMEH