| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0046195.1 putative Ty1-copia-like retrotransposon [Cucumis melo var. makuwa] | 7.9e-58 | 45.28 | Show/hide |
Query: DNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTST----GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLK
D+F+L ILTALE Y LES+ ++ +P ++++ P S+ S+ + N Y WKRQD+++SSWL+GSMSEDIL+ M+H T+ K+IW L+
Subjt: DNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTST----GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLK
Query: QIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENRNESKL
I+++R LA+ M+ K KL ++KG+M+LKEYF KIQQ VDALA++ KP+ +DHIL+IL+GLG++++S++S+ISA+ SVQ+ MSLLLTQE++ ESK+
Subjt: QIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENRNESKL
Query: VHTEGSVPSVNLMVKT-------SEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRYAPPSSHSPPG
+E S+P+VN+ T E +V+ + + R G SNRGGRG NR+K QCQ+CSKFGH A RC+FRY P +PP
Subjt: VHTEGSVPSVNLMVKT-------SEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRYAPPSSHSPPG
Query: SYTPNFS
Y+ N S
Subjt: SYTPNFS
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| KAA0048297.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.5e-85 | 52.65 | Show/hide |
Query: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
MS+ S L + ++SS +QIF GNKIS+VKL DD FLLWKFQILTALE Y+LE+ L E++PP+++L ++ S+S T NPAY WKRQD+
Subjt: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
Query: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
++SSWL+GSMSE+IL+ M+HC + KEIW L+ IF++R LAQ M+ K KL I+KGSM LKEYF KI Q VDALA++ KPV +DHIL+IL+GLGSD++S
Subjt: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
Query: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
M+SVISA+ SVQEVMSLLLTQE++NESKL+ +E ++PSVN++ +T+E + + + RGGRG SNRG RG NRNK QCQ+
Subjt: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
Query: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
C+K G++A RCFFRY P S+ S P S+ +++ N ++PQM+ MVA D+N D+N
Subjt: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
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| KAA0053143.1 keratin, type II cytoskeletal 1-like [Cucumis melo var. makuwa] | 2.8e-63 | 55.78 | Show/hide |
Query: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSS-STVKTSNPAYMQWKRQD
MS+ S L + + S IF GNKIS+VKL+DDNFLLWKFQILTALE Y+LE+ E+ +PP+++L TSTG SS S +T NP Y WKR +
Subjt: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSS-STVKTSNPAYMQWKRQD
Query: KVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFE
+++S WL+GSMSE+IL+ M+HC + KEIW L+ IF++R LAQ M+ K KL I+KGSM+LKEYF KIQQ VDALA++ KPV +DHIL+IL GLG D++
Subjt: KVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFE
Query: SMVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSE
SM+S+ISA+ S+QEVMSLLLTQE++NESKL+ +E ++P V ++ +T+E
Subjt: SMVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSE
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| TYK10642.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 1.5e-85 | 52.65 | Show/hide |
Query: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
MS+ S L + ++SS +QIF GNKIS+VKL DD FLLWKFQILTALE Y+LE+ L E++PP+++L ++ S+S T NPAY WKRQD+
Subjt: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
Query: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
++SSWL+GSMSE+IL+ M+HC + KEIW L+ IF++R LAQ M+ K KL I+KGSM LKEYF KI Q VDALA++ KPV +DHIL+IL+GLGSD++S
Subjt: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
Query: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
M+SVISA+ SVQEVMSLLLTQE++NESKL+ +E ++PSVN++ +T+E + + + RGGRG SNRG RG NRNK QCQ+
Subjt: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
Query: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
C+K G++A RCFFRY P S+ S P S+ +++ N ++PQM+ MVA D+N D+N
Subjt: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
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| XP_022154487.1 uncharacterized protein LOC111021757 [Momordica charantia] | 4.5e-69 | 42.9 | Show/hide |
Query: SSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHM
+S+ +PG+K+SIV+L DDN LLWKFQI TAL+G LES++++ D PAQF+ T+ +SSS+ NPAY +W +QDK++S+WL+GSM+EDIL M
Subjt: SSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHM
Query: IHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVM
+ C + +EIW+ L+ +F +R LA++M++K+KL+ +KG+++LK+YF KI+ VD+LA GK + EDHI+ IL+GLG +F++++SVI+A+ PQ++QEV
Subjt: IHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVM
Query: SLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRY---
SLLL QE RNE L++++GS+PSVNL + D SK N+ S+ F + + RG +NR W NK QCQ+C +FGHTA RC+ R+
Subjt: SLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRY---
Query: -----APPSSHSP-------------------PGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
P++ SP P + NFS + SPS QM ++ D N D+N
Subjt: -----APPSSHSP-------------------PGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7U233 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-86 | 52.65 | Show/hide |
Query: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
MS+ S L + ++SS +QIF GNKIS+VKL DD FLLWKFQILTALE Y+LE+ L E++PP+++L ++ S+S T NPAY WKRQD+
Subjt: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
Query: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
++SSWL+GSMSE+IL+ M+HC + KEIW L+ IF++R LAQ M+ K KL I+KGSM LKEYF KI Q VDALA++ KPV +DHIL+IL+GLGSD++S
Subjt: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
Query: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
M+SVISA+ SVQEVMSLLLTQE++NESKL+ +E ++PSVN++ +T+E + + + RGGRG SNRG RG NRNK QCQ+
Subjt: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
Query: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
C+K G++A RCFFRY P S+ S P S+ +++ N ++PQM+ MVA D+N D+N
Subjt: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
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| A0A5A7UB21 Keratin, type II cytoskeletal 1-like | 1.4e-63 | 55.78 | Show/hide |
Query: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSS-STVKTSNPAYMQWKRQD
MS+ S L + + S IF GNKIS+VKL+DDNFLLWKFQILTALE Y+LE+ E+ +PP+++L TSTG SS S +T NP Y WKR +
Subjt: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSS-STVKTSNPAYMQWKRQD
Query: KVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFE
+++S WL+GSMSE+IL+ M+HC + KEIW L+ IF++R LAQ M+ K KL I+KGSM+LKEYF KIQQ VDALA++ KPV +DHIL+IL GLG D++
Subjt: KVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFE
Query: SMVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSE
SM+S+ISA+ S+QEVMSLLLTQE++NESKL+ +E ++P V ++ +T+E
Subjt: SMVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSE
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| A0A5D3CH97 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.4e-86 | 52.65 | Show/hide |
Query: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
MS+ S L + ++SS +QIF GNKIS+VKL DD FLLWKFQILTALE Y+LE+ L E++PP+++L ++ S+S T NPAY WKRQD+
Subjt: MSTQQSSLSAASEDSSSSSSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHL--ENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDK
Query: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
++SSWL+GSMSE+IL+ M+HC + KEIW L+ IF++R LAQ M+ K KL I+KGSM LKEYF KI Q VDALA++ KPV +DHIL+IL+GLGSD++S
Subjt: VVSSWLVGSMSEDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFES
Query: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
M+SVISA+ SVQEVMSLLLTQE++NESKL+ +E ++PSVN++ +T+E + + + RGGRG SNRG RG NRNK QCQ+
Subjt: MVSVISAKIGPQSVQEVMSLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQV
Query: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
C+K G++A RCFFRY P S+ S P S+ +++ N ++PQM+ MVA D+N D+N
Subjt: CSKFGHTATRCFFRYAPPSSHS--PPGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
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| A0A5D3CRZ7 Putative Ty1-copia-like retrotransposon | 3.8e-58 | 45.28 | Show/hide |
Query: DNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTST----GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLK
D+F+L ILTALE Y LES+ ++ +P ++++ P S+ S+ + N Y WKRQD+++SSWL+GSMSEDIL+ M+H T+ K+IW L+
Subjt: DNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTST----GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHCTTTKEIWSCLK
Query: QIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENRNESKL
I+++R LA+ M+ K KL ++KG+M+LKEYF KIQQ VDALA++ KP+ +DHIL+IL+GLG++++S++S+ISA+ SVQ+ MSLLLTQE++ ESK+
Subjt: QIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENRNESKL
Query: VHTEGSVPSVNLMVKT-------SEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRYAPPSSHSPPG
+E S+P+VN+ T E +V+ + + R G SNRGGRG NR+K QCQ+CSKFGH A RC+FRY P +PP
Subjt: VHTEGSVPSVNLMVKT-------SEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRYAPPSSHSPPG
Query: SYTPNFS
Y+ N S
Subjt: SYTPNFS
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| A0A6J1DLT9 uncharacterized protein LOC111021757 | 2.2e-69 | 42.9 | Show/hide |
Query: SSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHM
+S+ +PG+K+SIV+L DDN LLWKFQI TAL+G LES++++ D PAQF+ T+ +SSS+ NPAY +W +QDK++S+WL+GSM+EDIL M
Subjt: SSQIFSPGNKISIVKLTDDNFLLWKFQILTALEGYNLESHLEN--DPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHM
Query: IHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVM
+ C + +EIW+ L+ +F +R LA++M++K+KL+ +KG+++LK+YF KI+ VD+LA GK + EDHI+ IL+GLG +F++++SVI+A+ PQ++QEV
Subjt: IHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAVGKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVM
Query: SLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRY---
SLLL QE RNE L++++GS+PSVNL + D SK N+ S+ F + + RG +NR W NK QCQ+C +FGHTA RC+ R+
Subjt: SLLLTQENRNESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGRGGRGGSNSNRGGRGSPWNNRNKVQCQVCSKFGHTATRCFFRY---
Query: -----APPSSHSP-------------------PGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
P++ SP P + NFS + SPS QM ++ D N D+N
Subjt: -----APPSSHSP-------------------PGSYTPNFSTFNRSPSYPQMTVMVATPDINHDTN
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 1.5e-06 | 25 | Show/hide |
Query: SIVKLT--DDNFLLWKFQILTALEGYNLESHLENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHCTTTKEIWS
SI KL+ +DN++ WK + S L F+D T D S P Y W++ + +V WL+ SM++ +L +++ T ++W
Subjt: SIVKLT--DDNFLLWKFQILTALEGYNLESHLENDPPAQFLDVPNTTSTGDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHCTTTKEIWS
Query: CLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQ
L+++F ++ +++ +L T+++G +++EYF K+ +
Subjt: CLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQ
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| AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 1.6e-08 | 25.34 | Show/hide |
Query: GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMS-EDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAV
G T+ +N + W+++D +V L G+++ + + +T+++IW +K F A+ +++ +L+T G M + +Y+ K+++ D+L V
Subjt: GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMS-EDILHHMIHCTTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAV
Query: GKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENRNESKL----VHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGR
PV + ++++L+GL F+++++VI + S + ++L +E+R + + H + S S L + P TN F +S G + G
Subjt: GKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENRNESKL----VHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSGGRDGR
Query: GGRGGSNS---NRGGRGSPWN
GRG N+ RGGR S +N
Subjt: GGRGGSNS---NRGGRGSPWN
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| AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162) | 3.2e-09 | 25.91 | Show/hide |
Query: GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHC-TTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAV
G S+ T T +WK +D +V W+ G++++ +L +I T +++W L+ +F A+ ++ + +L+T +++ EY K++ D L V
Subjt: GDSSSTVKTSNPAYMQWKRQDKVVSSWLVGSMSEDILHHMIHC-TTTKEIWSCLKQIFTTRNLAQMMKIKMKLQTIQKGSMTLKEYFSKIQQYVDALAAV
Query: GKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENR--NESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSG-GRDGRG
P+ ++ +L+GL ++ +++VI K S E S+LL +E+R N+SK + + PS++ ++ T + + + G GR +
Subjt: GKPVEVEDHILFILSGLGSDFESMVSVISAKIGPQSVQEVMSLLLTQENR--NESKLVHTEGSVPSVNLMVKTSEPDVSKTNSPQFSQSFGSG-GRDGRG
Query: GRGGSNSNRGGRGSPWNNRN
RGG +S+ GR +NN N
Subjt: GRGGSNSNRGGRGSPWNNRN
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