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Lag0016104 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016104
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:33183260..33185185
RNA-Seq ExpressionLag0016104
SyntenyLag0016104
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]4.6e-2147.8Show/hide
Query:  GPSGGESGRKRKAAVREAQ-----------------QEPDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDAMKLGSEHLKPS
        GP   ESGRKRKA VREA+                  + +  E EA  V HPHNDALV+ L IANAKVHRIL+DGGSS D+ S  A+ AM LG E LK S
Subjt:  GPSGGESGRKRKAAVREAQ-----------------QEPDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDAMKLGSEHLKPS

Query:  LTPLVGFGGESKPERERRITGDVWRRITDS-NEDGQFLGGRLRPAYNAILGRPTLHGLK
        LTPL+GFGGE    + R      +R    S      FL      +YN IL RPT+H L+
Subjt:  LTPLVGFGGESKPERERRITGDVWRRITDS-NEDGQFLGGRLRPAYNAILGRPTLHGLK

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]2.4e-2246.24Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQ--------------QEP---DGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EIRTI+GGP   E GRKRKA++RE +              ++P   +  E EA  + HPHND LV+ L IANAKVHRIL+DGGSSAD++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQ--------------QEP---DGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGESK-PERERRIT---GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK
        M LG    K S   LV F GE   PE    +T   G   + IT   +   FL      +YNAILGRPT+H LK
Subjt:  MKLGSEHLKPSLTPLVGFGGESK-PERERRIT---GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK

XP_022158093.1 uncharacterized protein LOC111024662 [Momordica charantia]7.6e-2446.82Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQEP----------DGQ-------EKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EI+TI GGP+  E G+KRKA+++EA+  P           GQ       E E   + HPHNDALV+ L I N KVHRIL+DGGSS  ++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQEP----------DGQ-------EKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGESKPERER---RIT-GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK
        M LG + LK +L PLVGFGGE   ++ R    +T G+  R IT   E   FL      +YNAILGRPT+H LK
Subjt:  MKLGSEHLKPSLTPLVGFGGESKPERER---RIT-GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK

XP_022158827.1 uncharacterized protein LOC111025291 [Momordica charantia]1.6e-2155.37Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EIRTI+GGP   ESGRKRKA VREA+                    +  E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGE
        M LG + LK SL PLVGFGGE
Subjt:  MKLGSEHLKPSLTPLVGFGGE

XP_022158828.1 uncharacterized protein LOC111025292 [Momordica charantia]1.6e-2155.37Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EIRTI+GGP   ESGRKRKA VREA+                    +  E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGE
        M LG + LK SL PLVGFGGE
Subjt:  MKLGSEHLKPSLTPLVGFGGE

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159012.2e-2147.8Show/hide
Query:  GPSGGESGRKRKAAVREAQ-----------------QEPDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDAMKLGSEHLKPS
        GP   ESGRKRKA VREA+                  + +  E EA  V HPHNDALV+ L IANAKVHRIL+DGGSS D+ S  A+ AM LG E LK S
Subjt:  GPSGGESGRKRKAAVREAQ-----------------QEPDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDAMKLGSEHLKPS

Query:  LTPLVGFGGESKPERERRITGDVWRRITDS-NEDGQFLGGRLRPAYNAILGRPTLHGLK
        LTPL+GFGGE    + R      +R    S      FL      +YN IL RPT+H L+
Subjt:  LTPLVGFGGESKPERERRITGDVWRRITDS-NEDGQFLGGRLRPAYNAILGRPTLHGLK

A0A6J1D8C9 uncharacterized protein LOC1110183001.2e-2246.24Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQ--------------QEP---DGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EIRTI+GGP   E GRKRKA++RE +              ++P   +  E EA  + HPHND LV+ L IANAKVHRIL+DGGSSAD++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQ--------------QEP---DGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGESK-PERERRIT---GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK
        M LG    K S   LV F GE   PE    +T   G   + IT   +   FL      +YNAILGRPT+H LK
Subjt:  MKLGSEHLKPSLTPLVGFGGESK-PERERRIT---GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK

A0A6J1DV51 uncharacterized protein LOC1110246623.7e-2446.82Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQEP----------DGQ-------EKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EI+TI GGP+  E G+KRKA+++EA+  P           GQ       E E   + HPHNDALV+ L I N KVHRIL+DGGSS  ++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQEP----------DGQ-------EKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGESKPERER---RIT-GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK
        M LG + LK +L PLVGFGGE   ++ R    +T G+  R IT   E   FL      +YNAILGRPT+H LK
Subjt:  MKLGSEHLKPSLTPLVGFGGESKPERER---RIT-GDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLK

A0A6J1DX67 uncharacterized protein LOC1110252927.6e-2255.37Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EIRTI+GGP   ESGRKRKA VREA+                    +  E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGE
        M LG + LK SL PLVGFGGE
Subjt:  MKLGSEHLKPSLTPLVGFGGE

A0A6J1DY78 uncharacterized protein LOC1110252917.6e-2255.37Show/hide
Query:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA
        +P  EIRTI+GGP   ESGRKRKA VREA+                    +  E EA  + HPHNDALV+ L IAN KVHRIL+DGGSSAD++S  A+ A
Subjt:  NPPLEIRTILGGPSGGESGRKRKAAVREAQQE-----------------PDGQEKEAKGVRHPHNDALVVALTIANAKVHRILIDGGSSADVLSTAAFDA

Query:  MKLGSEHLKPSLTPLVGFGGE
        M LG + LK SL PLVGFGGE
Subjt:  MKLGSEHLKPSLTPLVGFGGE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCACGCAGGAGTTCTCCGCTAACCCAGGCACCAGGGTGCCAAACGACCCGCAGTACGATGGGAAAAAGGATCCGAA
ACAGCACCTAGATGCATACCGAACTTGGATGGACTTTCATGGGGCAAACGAAGCGACAAGGTGCCGAGCCTTTGCACTTACACTCACGGGCTTAGCGAGGAAGAAGAGAG
ATCGGGGATGTCAATACCGGACCGGCGCCGTGAGGACAAGGGAAAGAGGCACCAGGCCGAGGGAAGAGCTCGGAGCCGACCTGAGCACTCCTCGCCAATGGCCGAGGCCG
ACCAGAAGCCAAGGAGCTGCAAGGTCGGCAGAGCCTAAGTCCAGGTACGACAGAAACCCTGATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGGCGATAGAAACAAGAG
GCCGCTACCAGCAGACCAAGACAAGGGTGGTGCCAACCCGCCACTTGAGATTCGAACCATTTTAGGGGGACCCTCCGGAGGAGAGTCGGGTAGGAAGCGGAAGGCTGCCG
TTCGAGAGGCACAGCAAGAGCCCGACGGGCAAGAAAAGGAGGCCAAAGGAGTACGCCATCCGCACAATGACGCGCTGGTGGTCGCTCTAACAATTGCCAATGCGAAGGTC
CACCGAATCCTCATTGATGGGGGAAGTTCCGCTGATGTGCTCTCAACTGCTGCGTTTGACGCCATGAAACTGGGGAGTGAACACCTGAAACCGAGCCTTACGCCGCTGGT
GGGTTTTGGCGGAGAAAGTAAGCCCGAGAGGGAGCGTCGAATTACCGGTGACGTTTGGAGAAGGATCACAGACAGTAACGAGGATGGTCAATTTCTTGGTGGTCGATTGC
GTCCCGCGTATAATGCCATCTTGGGACGACCCACTCTACACGGGCTCAAGGAGCAGTGTACGGCGAACAGAGAATGTCAAGGGAATGCTACTTCATGGCACTCAGGAACA
TTGACAGAAAGATTCAGGCGACACCAGCCTCGGGATATGGCCGAGGCCGAGCAGTCGAAGGAGCAAGTCTCCCCTCCCAATGGAGTATTAGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTCCGCTGCGTGGGGACTTTTATTCCCTTCACGCAGGAGTTCTCCGCTAACCCAGGCACCAGGGTGCCAAACGACCCGCAGTACGATGGGAAAAAGGATCCGAA
ACAGCACCTAGATGCATACCGAACTTGGATGGACTTTCATGGGGCAAACGAAGCGACAAGGTGCCGAGCCTTTGCACTTACACTCACGGGCTTAGCGAGGAAGAAGAGAG
ATCGGGGATGTCAATACCGGACCGGCGCCGTGAGGACAAGGGAAAGAGGCACCAGGCCGAGGGAAGAGCTCGGAGCCGACCTGAGCACTCCTCGCCAATGGCCGAGGCCG
ACCAGAAGCCAAGGAGCTGCAAGGTCGGCAGAGCCTAAGTCCAGGTACGACAGAAACCCTGATCCGAGAAGGTTACCTCAAGGAGTTCGTGGGGGCGATAGAAACAAGAG
GCCGCTACCAGCAGACCAAGACAAGGGTGGTGCCAACCCGCCACTTGAGATTCGAACCATTTTAGGGGGACCCTCCGGAGGAGAGTCGGGTAGGAAGCGGAAGGCTGCCG
TTCGAGAGGCACAGCAAGAGCCCGACGGGCAAGAAAAGGAGGCCAAAGGAGTACGCCATCCGCACAATGACGCGCTGGTGGTCGCTCTAACAATTGCCAATGCGAAGGTC
CACCGAATCCTCATTGATGGGGGAAGTTCCGCTGATGTGCTCTCAACTGCTGCGTTTGACGCCATGAAACTGGGGAGTGAACACCTGAAACCGAGCCTTACGCCGCTGGT
GGGTTTTGGCGGAGAAAGTAAGCCCGAGAGGGAGCGTCGAATTACCGGTGACGTTTGGAGAAGGATCACAGACAGTAACGAGGATGGTCAATTTCTTGGTGGTCGATTGC
GTCCCGCGTATAATGCCATCTTGGGACGACCCACTCTACACGGGCTCAAGGAGCAGTGTACGGCGAACAGAGAATGTCAAGGGAATGCTACTTCATGGCACTCAGGAACA
TTGACAGAAAGATTCAGGCGACACCAGCCTCGGGATATGGCCGAGGCCGAGCAGTCGAAGGAGCAAGTCTCCCCTCCCAATGGAGTATTAGTTTAG
Protein sequenceShow/hide protein sequence
MRFRCVGTFIPFTQEFSANPGTRVPNDPQYDGKKDPKQHLDAYRTWMDFHGANEATRCRAFALTLTGLARKKRDRGCQYRTGAVRTRERGTRPREELGADLSTPRQWPRP
TRSQGAARSAEPKSRYDRNPDPRRLPQGVRGGDRNKRPLPADQDKGGANPPLEIRTILGGPSGGESGRKRKAAVREAQQEPDGQEKEAKGVRHPHNDALVVALTIANAKV
HRILIDGGSSADVLSTAAFDAMKLGSEHLKPSLTPLVGFGGESKPERERRITGDVWRRITDSNEDGQFLGGRLRPAYNAILGRPTLHGLKEQCTANRECQGNATSWHSGT
LTERFRRHQPRDMAEAEQSKEQVSPPNGVLV