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Lag0016109 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016109
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionBeta-amylase
Genome locationchr12:33285663..33286437
RNA-Seq ExpressionLag0016109
SyntenyLag0016109
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593667.1 Beta-amylase 7, partial [Cucurbita argyrosperma subsp. sororia]9.2e-2057.73Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIF----YGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF  S+R F    +G     EISWF+ALET + S+ AGR C  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIF----YGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

KAG7026001.1 hypothetical protein SDJN02_12499 [Cucurbita argyrosperma subsp. argyrosperma]9.5e-2556.64Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDL-------------EISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHA
        M LDSSP    L+DG  I +YLAFR KGF  S+R F G + DL             EISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV A
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDL-------------EISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHA

Query:  HSGTGTIWDALSG
        HSG+GTIW+ LSG
Subjt:  HSGTGTIWDALSG

XP_022964580.1 beta-amylase 7-like isoform X1 [Cucurbita moschata]3.1e-2362.37Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF   +R F G + DLEISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

XP_022964581.1 beta-amylase 7-like isoform X2 [Cucurbita moschata]3.1e-2362.37Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF   +R F G + DLEISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

XP_022964593.1 beta-amylase 7-like isoform X6 [Cucurbita moschata]3.1e-2362.37Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF   +R F G + DLEISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

TrEMBL top hitse value%identityAlignment
A0A6J1HI67 Beta-amylase1.7e-1959.14Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF   +R F       EISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

A0A6J1HJC8 Beta-amylase1.5e-2362.37Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF   +R F G + DLEISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

A0A6J1HL80 Beta-amylase1.5e-2362.37Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF   +R F G + DLEISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

A0A6J1HLB5 Beta-amylase1.5e-2362.37Show/hide
Query:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT
        M LDSSP    L+DG  I +YLAFR KGF   +R F G + DLEISWF+ALET + S+ AGRAC  K+KRDVL+ TFSCQ C+EV AHSG+GT
Subjt:  MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCCTTGATTCTTCTCCCGCCGGAGCCTGGCTGATCGACGGCAATTTGATTCCGGAGTACCTTGCCTTTCGCCGGAAAGGTTTCTTCTCCTCCTCGAGAATTTTTTA
TGGTCTTATTGAAGATTTAGAAATTAGTTGGTTTGAGGCTCTGGAGACGTGGTTGCTTTCTTCTGCTGCTGGTAGGGCTTGTGTGAAGAAAATGAAACGTGACGTACTTG
AGAGTACTTTTTCCTGTCAGCCTTGCAAAGAAGTCCATGCACATAGTGGTACTGGTACCATATGGGACGCGTTATCTGGCCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCCTTGATTCTTCTCCCGCCGGAGCCTGGCTGATCGACGGCAATTTGATTCCGGAGTACCTTGCCTTTCGCCGGAAAGGTTTCTTCTCCTCCTCGAGAATTTTTTA
TGGTCTTATTGAAGATTTAGAAATTAGTTGGTTTGAGGCTCTGGAGACGTGGTTGCTTTCTTCTGCTGCTGGTAGGGCTTGTGTGAAGAAAATGAAACGTGACGTACTTG
AGAGTACTTTTTCCTGTCAGCCTTGCAAAGAAGTCCATGCACATAGTGGTACTGGTACCATATGGGACGCGTTATCTGGCCATTAA
Protein sequenceShow/hide protein sequence
MVLDSSPAGAWLIDGNLIPEYLAFRRKGFFSSSRIFYGLIEDLEISWFEALETWLLSSAAGRACVKKMKRDVLESTFSCQPCKEVHAHSGTGTIWDALSGH