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Lag0016117 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016117
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionGag/pol protein
Genome locationchr12:33406112..33408830
RNA-Seq ExpressionLag0016117
SyntenyLag0016117
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036865.1 uncharacterized protein E6C27_scaffold20G001750 [Cucumis melo var. makuwa]6.6e-0764Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
        +NNWF VQP NL P G  +   P VQ L+S LKGT  LLS KWVGVNFVL
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
KAA0040590.1 hypothetical protein E6C27_scaffold262G001640 [Cucumis melo var. makuwa]4.3e-0651.61Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDY---VHNYLP
        +NNWF VQP N  P       +P VQ L+S LKGT  LLS KWVGVNF+L      +H+ LP
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDY---VHNYLP
KAA0047518.1 gag-protease polyprotein [Cucumis melo var. makuwa]1.9e-0654.1Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDYVHNYLPGL
        +NNWF VQP N  P        P VQ L+S LKGT  LLS KWVGVNF L  YV +Y  G+
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDYVHNYLPGL
KAA0057124.1 hypothetical protein E6C27_scaffold153G00170 [Cucumis melo var. makuwa]8.6e-0764Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
        +NNWF VQP NL P        PFVQ L+S LKGT  LLS KWVGVNFVL
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
TYK01183.1 hypothetical protein E5676_scaffold2044G00240 [Cucumis melo var. makuwa]4.3e-0660Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
        +NNWF VQP NL P        P+VQ L+S LKGT  LLS KWVGVNF+L
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
TrEMBL top hitse value%identityAlignment
A0A5A7UPJ1 Uncharacterized protein4.2e-0764Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
        +NNWF VQP NL P        PFVQ L+S LKGT  LLS KWVGVNFVL
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
A0A5D3B9X4 Uncharacterized protein3.2e-0764Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
        +NNWF VQP NL P G  +   P VQ L+S LKGT  LLS KWVGVNFVL
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
A0A5D3BN46 Uncharacterized protein2.1e-0660Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
        +NNWF VQP NL P        P+VQ L+S LKGT  LLS KWVGVNF+L
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVL
A0A5D3C347 Uncharacterized protein2.1e-0651.61Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDY---VHNYLP
        +NNWF VQP N  P       +P VQ L+S LKGT  LLS KWVGVNF+L      +H+ LP
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDY---VHNYLP
A0A5D3DRY2 Gag-protease polyprotein9.3e-0754.1Show/hide
Query:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDYVHNYLPGL
        +NNWF VQP N  P        P VQ L+S LKGT  LLS KWVGVNF L  YV +Y  G+
Subjt:  MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDYVHNYLPGL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAATTGGTTTGTGGTCCAACCACCAAACCTAATACCTCTCGGGCCAATGAGAGGGCGAGATCCCTTTGTTCAAGTCCTGGAGTCAGCACTTAAGGGAACAATCGC
TCTACTATCCCTGAAGTGGGTAGGAGTGAATTTCGTCTTGCAAGACTACGTCCACAACTATCTACCCGGTCTTATTGAGAGGAATGAGCTGAGATCATGGTTGAGGCTAG
AGGATAGCGGGGAAGACACTCATGGTGGTCCACAACACGTTGGTGTTCAAATTCATCCCTCGGAGTTGCTCAATTCGGCTATCAAAGCGCTCCGAACGACCCAGTACGGG
GGTCCAGGGGCAAAGCGCCCGGTGGGGGTTCGGGGGCAACGCCCCCTAAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAATTGGTTTGTGGTCCAACCACCAAACCTAATACCTCTCGGGCCAATGAGAGGGCGAGATCCCTTTGTTCAAGTCCTGGAGTCAGCACTTAAGGGAACAATCGC
TCTACTATCCCTGAAGTGGGTAGGAGTGAATTTCGTCTTGCAAGACTACGTCCACAACTATCTACCCGGTCTTATTGAGAGGAATGAGCTGAGATCATGGTTGAGGCTAG
AGGATAGCGGGGAAGACACTCATGGTGGTCCACAACACGTTGGTGTTCAAATTCATCCCTCGGAGTTGCTCAATTCGGCTATCAAAGCGCTCCGAACGACCCAGTACGGG
GGTCCAGGGGCAAAGCGCCCGGTGGGGGTTCGGGGGCAACGCCCCCTAAGCTAA
Protein sequenceShow/hide protein sequence
MNNWFVVQPPNLIPLGPMRGRDPFVQVLESALKGTIALLSLKWVGVNFVLQDYVHNYLPGLIERNELRSWLRLEDSGEDTHGGPQHVGVQIHPSELLNSAIKALRTTQYG
GPGAKRPVGVRGQRPLS