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Lag0016122 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016122
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionPMD domain-containing protein
Genome locationchr12:33525554..33525910
RNA-Seq ExpressionLag0016122
SyntenyLag0016122
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033523.1 hypothetical protein E6C27_scaffold261G00660 [Cucumis melo var. makuwa]7.0e-2747.41Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P +N ESTLGRR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
        +RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

KAA0033822.1 uncharacterized protein E6C27_scaffold1735G00180 [Cucumis melo var. makuwa]3.1e-2748.28Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P ENPESTL RR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
         RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

TYJ95665.1 hypothetical protein E5676_scaffold104G00970 [Cucumis melo var. makuwa]7.0e-2747.41Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P +N ESTLGRR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
        +RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

TYK21863.1 uncharacterized protein E5676_scaffold836G00160 [Cucumis melo var. makuwa]3.1e-2748.28Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P ENPESTL RR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
         RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]2.7e-3155.08Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MV+FTE+ D  K CL+ILKD DQ +E  +ILPV E    N   SQ   D+  FL +WS+ER ++ +SSLK+WFLES +HNK P E+PESTLGRRII D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYIPN
        +RWG+ +++HGEF+Y+P+
Subjt:  VRWGSSIRIHGEFFYIPN

TrEMBL top hitse value%identityAlignment
A0A5A7SRI5 Uncharacterized protein1.5e-2748.28Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P ENPESTL RR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
         RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

A0A5A7SST7 PMD domain-containing protein3.4e-2747.41Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P +N ESTLGRR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
        +RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

A0A5A7U4C3 Uncharacterized protein1.3e-2646.55Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV +    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P ENPESTLG ++I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
        +RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

A0A5D3BB02 PMD domain-containing protein3.4e-2747.41Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P +N ESTLGRR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
        +RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

A0A5D3DEA3 Uncharacterized protein1.5e-2748.28Show/hide
Query:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ
        MVYFTE+ D  K CL+ILKD +Q +++ ++LPV E    N   SQ   ++   L +WS+E+ ++ +S L +WFLES +HNK+P ENPESTL RR+I D +
Subjt:  MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQ

Query:  VRWGSSIRIHGEFFYI
         RWG+ +++HGEF+Y+
Subjt:  VRWGSSIRIHGEFFYI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTATTTCACTGAGCACCCTGATCCTGAGAAAAACTGCTTAGTAATCTTGAAGGATAGAGATCAACCTGTTGAAAATGACGTTATTCTTCCTGTAGGAGAGACAAT
GTGTGGTAATTTTAGGAGATCACAACCTTGTCTAGATGATTCTACCTTTTTGTCTAGATGGTCTGAAGAAAGACTTTTGAGTCACGACTCTTCCTTGAAGGCGTGGTTTT
TAGAGTCTCCAATGCATAACAAGGTGCCAGGTGAAAATCCAGAATCAACTTTAGGTCGTCGCATTATTGGAGATGAACAAGTTCGCTGGGGTAGTTCAATAAGAATTCAT
GGAGAATTCTTTTATATCCCTAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTATTTCACTGAGCACCCTGATCCTGAGAAAAACTGCTTAGTAATCTTGAAGGATAGAGATCAACCTGTTGAAAATGACGTTATTCTTCCTGTAGGAGAGACAAT
GTGTGGTAATTTTAGGAGATCACAACCTTGTCTAGATGATTCTACCTTTTTGTCTAGATGGTCTGAAGAAAGACTTTTGAGTCACGACTCTTCCTTGAAGGCGTGGTTTT
TAGAGTCTCCAATGCATAACAAGGTGCCAGGTGAAAATCCAGAATCAACTTTAGGTCGTCGCATTATTGGAGATGAACAAGTTCGCTGGGGTAGTTCAATAAGAATTCAT
GGAGAATTCTTTTATATCCCTAATTAA
Protein sequenceShow/hide protein sequence
MVYFTEHPDPEKNCLVILKDRDQPVENDVILPVGETMCGNFRRSQPCLDDSTFLSRWSEERLLSHDSSLKAWFLESPMHNKVPGENPESTLGRRIIGDEQVRWGSSIRIH
GEFFYIPN