; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016126 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016126
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H-like superfamily protein
Genome locationchr12:33620822..33625054
RNA-Seq ExpressionLag0016126
SyntenyLag0016126
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR012337 - Ribonuclease H-like superfamily
IPR026960 - Reverse transcriptase zinc-binding domain
IPR036397 - Ribonuclease H superfamily
IPR044730 - Ribonuclease H-like domain, plant type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAK39575.1 putative reverse transcriptase [Oryza sativa Japonica Group]1.2e-4229.6Show/hide
Query:  KDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRL
        K I WR+GN  ++   RDPW+P++ S +PI    N R   V+ L+     W+V  +   F   DA  ILNI I   S  D + WH D  G+FSV+SAYRL
Subjt:  KDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRL

Query:  GMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLD
          QL    E+S S        W+  WK K+P K+ I  W++  + L T VN   R ++    C +C +  E   H    C    + W      S  V +D
Subjt:  GMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLD

Query:  DR-----RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVE--PDRGVVRSERIEDVED----
         +     R W + D  E I            + +  L+ +W+ W  RN + H  + P T+     I+ S  +L  ++   P   +V+ + +         
Subjt:  DR-----RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVE--PDRGVVRSERIEDVED----

Query:  ------DNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQ
              +N +  W   + G  KLN D S+     + G+G ILR   G ++    +P++R       E    +EGL   I  T   I+VE D    ++LLQ
Subjt:  ------DNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQ

Query:  GREEDITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKA
        G   D +  +  ++EAR LL    V SI  I R  N ++H+L + A
Subjt:  GREEDITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKA

TXG50387.1 hypothetical protein EZV62_022911 [Acer yangbiense]1.4e-4327.31Show/hide
Query:  VEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGMQLQVATEASV
        V   R    P   S + +    +++N +V++L  PS  WN +L+++SFL  DA+ IL++P    +  D + WH D RG ++V+S Y++ + L+    +S 
Subjt:  VEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGMQLQVATEASV

Query:  SIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDRRGWTIVDWCE
            Q    W+  WK  IP K  I  WK F+  LPT   L  R +D++  C +C    ES TH  W C+   + W+       +  +       + D+  
Subjt:  SIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDRRGWTIVDWCE

Query:  LIWGESRERGWEIQDISRSLIII--WQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRGRWKLNCDA
        +I    R     +  +  +L+II  W++W +RNSV H +       ++  I+    E     E +   V S           +  W   +RG +K+NCDA
Subjt:  LIWGESRERGWEIQDISRSLIII--WQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRGRWKLNCDA

Query:  SWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNEARSLLTNLNVES
        S+  R  + G+G I+R + GS + A   PV     +  LEA   +EG+   I      + +E D+   I+LL  +    TE    ++ + +L  ++N+ S
Subjt:  SWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNEARSLLTNLNVES

Query:  IIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNRED
         + + R  N +AH +   A   +S   W    P  +  L R D
Subjt:  IIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNRED

VVA32947.1 PREDICTED: retrotransposon [Prunus dulcis]5.8e-4228.57Show/hide
Query:  KDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNI-RNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR
        K + WR+GN ++++   D W+P     K I S P +  + +V  L   S  WNV L+KD F + +  + L IP+   +  D +IWH +  G++SVKS YR
Subjt:  KDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNI-RNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR

Query:  LGM--QLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVV
        L    + +++ E SV  V      WKK W  KIP KI    W+   D LP    L NR +   P C  C +  ES  H  W C   ++ W+      N  
Subjt:  LGM--QLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVV

Query:  FLDDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNS-VFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGW
        + +    W +  + EL          E Q +   L   W +W  RNS +F   ++  T+LL       M +L +E      +  +             GW
Subjt:  FLDDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNS-VFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGW

Query:  IPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLT-TISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFL
         P   G +K+N D +     + RG+G ++R  +G  + A  R +  S+     E    IEGL   I     A  +E D+   I  +   EE      L +
Subjt:  IPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLT-TISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFL

Query:  NEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNREDIGNVE
         E   LL N         PR  NK+AH L   A   N    W    P WL+ +   D+ ++E
Subjt:  NEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNREDIGNVE

XP_030483481.1 uncharacterized protein LOC115700065 [Cannabis sativa]6.8e-4327.49Show/hide
Query:  IEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGM
        + W++G   ++    DPWIP      PI+ +    N +VA L+   R WN QL+ + F   D   IL IP+   S++D +IWH  S GI+ V S Y    
Subjt:  IEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGM

Query:  QLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDR
         L+ +  +S S        WK FWK ++P KI I  W++F D LP   +L+ R +    TCS+CR+A ES  H  + C   +  W+    H      D  
Subjt:  QLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDR

Query:  RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRG
            +     L++  +     E++ I   + I+W IW  RN + H      T LL       ++  +      R    +            + W P   G
Subjt:  RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRG

Query:  RWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTSPAI-RVEFDSLQTIRLLQGREEDITETSLFLNEARSL
          K+N DA+ +   N+ GIG ++R   G+++ A  +P+  ++    +EA  +   L   S     + ++E D++     L GR   I+     +N+   L
Subjt:  RWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTSPAI-RVEFDSLQTIRLLQGREEDITETSLFLNEARSL

Query:  LTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNRED
        L+     S++H  R  NK AH L   A   + +  W ++FP  L S+   D
Subjt:  LTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNRED

XP_030502765.1 uncharacterized protein LOC115717936 [Cannabis sativa]3.7e-4127.69Show/hide
Query:  LKDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR
        LK + WR+G+ + +    D W+P   + KP +      N +VA L+   R W++  ++ +F + D   IL+IP+      D +IW     GI++VKS Y+
Subjt:  LKDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR

Query:  LGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFL
        L + L  A +   +     E  W  FWK KIP K+ I  WK+F   LP    L  R +   P C++C  A ES TH  + C   +  W +  S  N+ F 
Subjt:  LGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFL

Query:  DDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLL-----HLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRT
          R+  +      L             +  + L+I W  W  RN+++H N+    + +      +L E   A   R  +P    V +       +     
Subjt:  DDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLL-----HLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRT

Query:  GWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTSPAIR-VEFDSLQTIRLLQGREEDITETSL
         W    RGR KLN +A+  +  N+ GIG  LR  DG +V A  +P+  ++K   +EA  L   L  + + + +I  +E DSL  ++ L   +  ++    
Subjt:  GWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTSPAIR-VEFDSLQTIRLLQGREEDITETSL

Query:  FLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISL
         LN    L++      I H+ R  N  AH L   A   ++   W   FP+ L++L
Subjt:  FLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISL

TrEMBL top hitse value%identityAlignment
A0A5C7H0P0 Uncharacterized protein6.7e-4427.31Show/hide
Query:  VEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGMQLQVATEASV
        V   R    P   S + +    +++N +V++L  PS  WN +L+++SFL  DA+ IL++P    +  D + WH D RG ++V+S Y++ + L+    +S 
Subjt:  VEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGMQLQVATEASV

Query:  SIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDRRGWTIVDWCE
            Q    W+  WK  IP K  I  WK F+  LPT   L  R +D++  C +C    ES TH  W C+   + W+       +  +       + D+  
Subjt:  SIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDRRGWTIVDWCE

Query:  LIWGESRERGWEIQDISRSLIII--WQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRGRWKLNCDA
        +I    R     +  +  +L+II  W++W +RNSV H +       ++  I+    E     E +   V S           +  W   +RG +K+NCDA
Subjt:  LIWGESRERGWEIQDISRSLIII--WQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRGRWKLNCDA

Query:  SWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNEARSLLTNLNVES
        S+  R  + G+G I+R + GS + A   PV     +  LEA   +EG+   I      + +E D+   I+LL  +    TE    ++ + +L  ++N+ S
Subjt:  SWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNEARSLLTNLNVES

Query:  IIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNRED
         + + R  N +AH +   A   +S   W    P  +  L R D
Subjt:  IIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISLNRED

A0A803P9P5 Uncharacterized protein6.0e-4529.75Show/hide
Query:  KDIEWRIGNEINVEATRDPWIPKEGSCKP-IYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR
        K + W++GN   +    DPW+P   S KP I+ +P++ +  V++L+   R WN  L++  FLE D   I +IP+     SD++IW+ ++ G++SVKS Y 
Subjt:  KDIEWRIGNEINVEATRDPWIPKEGSCKP-IYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR

Query:  LGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQI-FFSHSNVVF
        L  +L+    A+ S        WKKFW   +P+KI I  W+   D LP    L +R +     C+LC +A ES TH  + C   RK WQ+  FS S+ V 
Subjt:  LGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQI-FFSHSNVVF

Query:  LDDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFH-TNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWI
               +++D       ++  + W  + I +   I+W IW  RN   H + T+P    L   ++    E  +    +     S          Q   W+
Subjt:  LDDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFH-TNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWI

Query:  PIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTS-PAIRVEFDSLQTIRLLQGREEDITETSLFLN
            GR KLN DA+ +   N  G G ILR   G ++ A   P    +K   +EA  LI  L  +  +  P   +E DSL  ++ LQ  +  I++    LN
Subjt:  PIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTS-PAIRVEFDSLQTIRLLQGREEDITETSLFLN

Query:  EARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPN
            L++N     I H  R  N  AH L   A   ++   W    P+
Subjt:  EARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPN

A0A803PJK4 Uncharacterized protein4.2e-4629.71Show/hide
Query:  IEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGM
        + W++GN + ++   DPW+P   S KP+    +  N  V++L+   R W++  +K +FL+ D   IL+IP+   S  D++IWH ++ GI++VKS Y L  
Subjt:  IEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRLGM

Query:  QLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDR
        +   A + + S+      LWK FWK  IP+K+ I  WK   + LP    L    +     CSLCR   ES  H  + C   +K W+         F  DR
Subjt:  QLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDR

Query:  RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFH-TNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRT---GWIP
               + +L +  S    W  Q++ +   I+W IW  RN  +H T  +P   LL+     S      E +  R    +    +V  +N+ T    W+ 
Subjt:  RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFH-TNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRT---GWIP

Query:  IQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTI-STTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNE
           GR KLN DA+        G G ILR  DG +V A  +P    +K   +EA  L   L  + S   P   +E DSL  ++ LQ R  ++++    LN+
Subjt:  IQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTI-STTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNE

Query:  ARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISL
           L++N     I H+ R  N  AH L   A   +    W    P  L+++
Subjt:  ARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISL

A0A803Q2K8 Uncharacterized protein1.5e-4327.09Show/hide
Query:  LKDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR
        LK + WR+G+ +++    D W+P   + KP +      N +VA L+   R W++  ++ +F + D   IL+IP+      D +IW     GI++VKS Y+
Subjt:  LKDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYR

Query:  LGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFL
        L   +  A +   +     E  W  FWK K+P K+ I  WK+F   LP    L  R +   P CS+C  A ES  H  ++C   +  W++   H +   L
Subjt:  LGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFL

Query:  DDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAEL-NREVEPDRGVVRSERIEDVEDDNQRT---G
               I+         S        +    L++ W  W  RN+++H NT   ++ +       +AE  N   +  +    S    D    ++ T    
Subjt:  DDRRGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAEL-NREVEPDRGVVRSERIEDVEDDNQRT---G

Query:  WIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTSPAIR-VEFDSLQTIRLLQGREEDITETSLF
        W    +GR KLN DA+  K  N+ GIG  LR  DG +V A  +P+  ++K   +EA  L   L  + + + ++  +E DSL  ++ L   +  ++     
Subjt:  WIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTSPAIR-VEFDSLQTIRLLQGREEDITETSLF

Query:  LNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISL
        LN    L++      I H+ R  N  AH L   A   ++   W   FP+ L++L
Subjt:  LNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACESNSSEGWSNNFPNWLISL

Q94HY0 Retrotransposon protein, putative, unclassified5.6e-4329.6Show/hide
Query:  KDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRL
        K I WR+GN  ++   RDPW+P++ S +PI    N R   V+ L+     W+V  +   F   DA  ILNI I   S  D + WH D  G+FSV+SAYRL
Subjt:  KDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSAYRL

Query:  GMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLD
          QL    E+S S        W+  WK K+P K+ I  W++  + L T VN   R ++    C +C +  E   H    C    + W      S  V +D
Subjt:  GMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLD

Query:  DR-----RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVE--PDRGVVRSERIEDVED----
         +     R W + D  E I            + +  L+ +W+ W  RN + H  + P T+     I+ S  +L  ++   P   +V+ + +         
Subjt:  DR-----RGWTIVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVE--PDRGVVRSERIEDVED----

Query:  ------DNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQ
              +N +  W   + G  KLN D S+     + G+G ILR   G ++    +P++R       E    +EGL   I  T   I+VE D    ++LLQ
Subjt:  ------DNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQ

Query:  GREEDITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKA
        G   D +  +  ++EAR LL    V SI  I R  N ++H+L + A
Subjt:  GREEDITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26855.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein6.7e-0436.36Show/hide
Query:  WKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWEC
        W  KI  KI +  WK  ++ LP    L++R + I P C+ CR   E+ TH  + C
Subjt:  WKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWEC

AT4G29090.1 Ribonuclease H-like superfamily protein6.9e-1720.63Show/hide
Query:  IGNEINVEATRDPWI---PKEGSCK----PIYSHPNIRNFI-VAQLMQPS-RDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSA
        +GN  ++   R  W+   P   + +    P   + ++ + + V+ L+  S R+W   +++  F E +   I  +        D   W   S G ++VKS 
Subjt:  IGNEINVEATRDPWI---PKEGSCK----PIYSHPNIRNFI-VAQLMQPS-RDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKSA

Query:  YRLGMQL-------QVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIF
        Y +  Q+       Q  +E S++ + Q      K WK++   KI    WK   + LP    L  R +     C  C    E+  H  ++C+  R  W I 
Subjt:  YRLGMQL-------QVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIF

Query:  FSHSNVVFLDDRRGWTIVDWCELIWGESRERGWEIQDISRSLI--IIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVE
            + + +     W    +  L W  +   G    + +  L+  ++W++WK+RN +     + + + +L   E  + E     E +    + +      
Subjt:  FSHSNVVFLDDRRGWTIVDWCELIWGESRERGWEIQDISRSLI--IIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVE

Query:  DDNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTS-PAIRVEFDSLQTIRLLQGREED
        + +    W P      K N DA+W++   R GIGW+LR   G +     R + +   +   E   +   + ++S      +  E DS   I +L   +E 
Subjt:  DDNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTS-PAIRVEFDSLQTIRLLQGREED

Query:  ITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKA
               + + + LL+       + IPR  N +A  +  ++
Subjt:  ITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKA

AT5G18880.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein4.2e-0623.48Show/hide
Query:  AQLMQPSR--DWNVQLVKDSFLEHDATSILNIPI-HPSSSSDEVIWHLDSRGIFSVKSAYRLGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICG
        A++++ SR  DW +   +    +    ++   P+ H S   D  +W   +       S+     Q++V +      V   + +W   +K  IP   LI  
Subjt:  AQLMQPSR--DWNVQLVKDSFLEHDATSILNIPI-HPSSSSDEVIWHLDSRGIFSVKSAYRLGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICG

Query:  WKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIF---FSHSNVVFLDDRRGWTIVDWCELIWGESRERGWEIQDISRSLIII
        W  F + LPTR  L   GM+I  +  LC    E+  H F+ECS +   W+ F   F  S    L     W       ++    R     I  +      +
Subjt:  WKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIF---FSHSNVVFLDDRRGWTIVDWCELIWGESRERGWEIQDISRSLIII

Query:  WQIWKHRNSVFHTNTQPDTKLLLHLIEKSM
        + +WK RN+   T+       L   I+++M
Subjt:  WQIWKHRNSVFHTNTQPDTKLLLHLIEKSM

AT5G65005.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-0423.26Show/hide
Query:  IIWQIWKHRNSVF--HTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGS
        ++W+IWK  N +   HT T+  T + + L +      N      +   R+       D ++ T W P  R + K N DAS  +R    G+GWILR   G+
Subjt:  IIWQIWKHRNSVF--HTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRGRWKLNCDASWSKRLNRRGIGWILRRWDGS

Query:  LVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACE
        ++                E +TLI  +  +       +  E D+ QTI  +   +        FL+  +S + +          R  N  A  L  +A +
Subjt:  LVRADYRPVDRSWKICWLEATTLIEGL-TTISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGHKACE

Query:  SNSSEGWSNNFPNWL
         N+     ++ P +L
Subjt:  SNSSEGWSNNFPNWL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTGGCGAAGCATTTTATGGGGTCGCGAGCTCTTTTCTAAAGGATATCGAATGGCGAATTGGGAATGAAATAAATGTTGAAGCGACTAGGGATCCATGGATTCCTAA
AGAAGGCTCCTGCAAACCAATTTATTCCCATCCAAATATTAGGAACTTCATTGTGGCTCAACTAATGCAACCATCAAGGGATTGGAATGTTCAACTAGTGAAAGACTCTT
TTCTTGAGCATGATGCAACTTCTATTCTAAATATCCCTATACATCCATCGAGTAGCTCGGATGAGGTTATTTGGCATTTAGATTCAAGAGGGATTTTCTCAGTAAAGAGC
GCCTACAGGCTAGGGATGCAATTACAAGTTGCTACGGAAGCTTCAGTTTCTATCGTGCAGCAAAGAGAAGGCCTTTGGAAGAAATTTTGGAAGACAAAGATACCGACCAA
AATTCTGATATGTGGCTGGAAATTATTCGACGATATCCTTCCTACCAGAGTTAATTTAATTAATCGGGGGATGGATATTATTCCTACATGTTCTCTTTGTAGAAAGGCAC
CAGAATCAGCAACTCACTTTTTCTGGGAGTGTAGTTGCACTAGAAAGGCTTGGCAAATTTTTTTTAGTCACTCTAATGTTGTTTTTCTGGATGACAGGAGGGGATGGACT
ATAGTGGACTGGTGTGAACTCATTTGGGGAGAATCTCGTGAAAGAGGATGGGAGATACAAGACATTTCGAGGAGTCTAATCATCATTTGGCAAATTTGGAAGCACAGGAA
TTCAGTTTTTCACACAAACACACAACCAGATACTAAGCTTTTACTACATTTAATCGAGAAGTCTATGGCAGAGTTAAATAGAGAAGTTGAACCTGATCGAGGAGTGGTGC
GAAGTGAGCGAATCGAGGATGTGGAAGACGACAATCAAAGAACCGGGTGGATCCCAATCCAACGGGGAAGATGGAAACTCAATTGCGATGCATCTTGGAGCAAGCGGCTG
AATAGACGCGGCATCGGTTGGATCCTTAGACGGTGGGACGGCTCTCTGGTGAGGGCCGACTACAGACCCGTCGATCGGTCGTGGAAGATCTGCTGGTTGGAAGCGACGAC
TCTGATTGAAGGACTGACGACGATTTCGACGACTTCGCCGGCAATTCGGGTAGAGTTTGATTCTCTTCAGACTATACGACTTCTTCAGGGGCGCGAGGAAGACATTACGG
AAACTTCTCTTTTCTTAAATGAAGCTAGAAGCCTGTTGACCAATCTAAATGTGGAATCTATCATCCATATTCCCAGAGGACATAACAAGATGGCCCATAATTTGGGCCAT
AAGGCATGTGAGTCAAACTCATCTGAGGGTTGGTCCAATAATTTTCCTAATTGGTTGATATCCTTAAATAGGGAAGATATTGGTAATGTTGAACTTTATAGTGGGGTTCC
TGTCCCACCGTCGCATGTTTTGTTTAGTTTTATGAAAGGTAGGACCAAAAGACCGACCCAGAGGAAGACCGGACCAAAGGGTCGGGCCAACATGACCCGACCCATATGGT
CGGCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCGTTTGCACGGGCCGAGCCCGGTGACCTCTTTTCGGTCCCTGATGCCCCGAATCGCCCCGGTTCCGCCTGGTTC
GTCCCGAAACACCACCGAATTCCTAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACCACGCTGGTGTGCAGCGGTTTTTGCTGGTCTTGCAGGT
CACGTCTTCCCCAGTTTCTATAAATTCACTGTTGGTGTCACGTGAAGATCTGGCAGCGGGCAAAGAGCCGCTGGTACGAGCGTTCTCCTTCCCGACTGGAGATCTGAGCA
ACGGTACAACCCACAGATCTGGTCACTGTCCGACACAACTACCAGCCGCCGGTAGCTCGCGTTCTCCCTCCCGACGACGCCGTTTCATTCCAGATCTGGTAGCGGGCAAC
GAGTCGTTGGTAGCTCGCGTTCTCCTTCCCGACGGGAGATCTGGCCGACGTCGGTCATCTTCGGCGTGCGCAAGCTTCGACAGGGGTTCCCCAGATCTGTCCGCCGGAGA
AGAAGATTTGAGCGGCAACTTTTTTTCTTTTTTAAGGTTGGAGAAGAAGGAGAAAAGAGAAAAGAGAGAGGAAAAAAAAAGCCATCGCGGTTGGCGAGCTGCGGCCGTCG
GCTTCCGGCTACCGTCGGCGGGTGTGGTGATGAAGAAGCTGACGAGTGTGGTGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGTGGCGAAGCATTTTATGGGGTCGCGAGCTCTTTTCTAAAGGATATCGAATGGCGAATTGGGAATGAAATAAATGTTGAAGCGACTAGGGATCCATGGATTCCTAA
AGAAGGCTCCTGCAAACCAATTTATTCCCATCCAAATATTAGGAACTTCATTGTGGCTCAACTAATGCAACCATCAAGGGATTGGAATGTTCAACTAGTGAAAGACTCTT
TTCTTGAGCATGATGCAACTTCTATTCTAAATATCCCTATACATCCATCGAGTAGCTCGGATGAGGTTATTTGGCATTTAGATTCAAGAGGGATTTTCTCAGTAAAGAGC
GCCTACAGGCTAGGGATGCAATTACAAGTTGCTACGGAAGCTTCAGTTTCTATCGTGCAGCAAAGAGAAGGCCTTTGGAAGAAATTTTGGAAGACAAAGATACCGACCAA
AATTCTGATATGTGGCTGGAAATTATTCGACGATATCCTTCCTACCAGAGTTAATTTAATTAATCGGGGGATGGATATTATTCCTACATGTTCTCTTTGTAGAAAGGCAC
CAGAATCAGCAACTCACTTTTTCTGGGAGTGTAGTTGCACTAGAAAGGCTTGGCAAATTTTTTTTAGTCACTCTAATGTTGTTTTTCTGGATGACAGGAGGGGATGGACT
ATAGTGGACTGGTGTGAACTCATTTGGGGAGAATCTCGTGAAAGAGGATGGGAGATACAAGACATTTCGAGGAGTCTAATCATCATTTGGCAAATTTGGAAGCACAGGAA
TTCAGTTTTTCACACAAACACACAACCAGATACTAAGCTTTTACTACATTTAATCGAGAAGTCTATGGCAGAGTTAAATAGAGAAGTTGAACCTGATCGAGGAGTGGTGC
GAAGTGAGCGAATCGAGGATGTGGAAGACGACAATCAAAGAACCGGGTGGATCCCAATCCAACGGGGAAGATGGAAACTCAATTGCGATGCATCTTGGAGCAAGCGGCTG
AATAGACGCGGCATCGGTTGGATCCTTAGACGGTGGGACGGCTCTCTGGTGAGGGCCGACTACAGACCCGTCGATCGGTCGTGGAAGATCTGCTGGTTGGAAGCGACGAC
TCTGATTGAAGGACTGACGACGATTTCGACGACTTCGCCGGCAATTCGGGTAGAGTTTGATTCTCTTCAGACTATACGACTTCTTCAGGGGCGCGAGGAAGACATTACGG
AAACTTCTCTTTTCTTAAATGAAGCTAGAAGCCTGTTGACCAATCTAAATGTGGAATCTATCATCCATATTCCCAGAGGACATAACAAGATGGCCCATAATTTGGGCCAT
AAGGCATGTGAGTCAAACTCATCTGAGGGTTGGTCCAATAATTTTCCTAATTGGTTGATATCCTTAAATAGGGAAGATATTGGTAATGTTGAACTTTATAGTGGGGTTCC
TGTCCCACCGTCGCATGTTTTGTTTAGTTTTATGAAAGGTAGGACCAAAAGACCGACCCAGAGGAAGACCGGACCAAAGGGTCGGGCCAACATGACCCGACCCATATGGT
CGGCCTCGGCAAAAGGCCGAGGCCGACCATTCGGCCCGTTTGCACGGGCCGAGCCCGGTGACCTCTTTTCGGTCCCTGATGCCCCGAATCGCCCCGGTTCCGCCTGGTTC
GTCCCGAAACACCACCGAATTCCTAAAAACCCTAGGAGGACAAACAGGCATCGGAGGCGGTGTGGCCTACACCACGCTGGTGTGCAGCGGTTTTTGCTGGTCTTGCAGGT
CACGTCTTCCCCAGTTTCTATAAATTCACTGTTGGTGTCACGTGAAGATCTGGCAGCGGGCAAAGAGCCGCTGGTACGAGCGTTCTCCTTCCCGACTGGAGATCTGAGCA
ACGGTACAACCCACAGATCTGGTCACTGTCCGACACAACTACCAGCCGCCGGTAGCTCGCGTTCTCCCTCCCGACGACGCCGTTTCATTCCAGATCTGGTAGCGGGCAAC
GAGTCGTTGGTAGCTCGCGTTCTCCTTCCCGACGGGAGATCTGGCCGACGTCGGTCATCTTCGGCGTGCGCAAGCTTCGACAGGGGTTCCCCAGATCTGTCCGCCGGAGA
AGAAGATTTGAGCGGCAACTTTTTTTCTTTTTTAAGGTTGGAGAAGAAGGAGAAAAGAGAAAAGAGAGAGGAAAAAAAAAGCCATCGCGGTTGGCGAGCTGCGGCCGTCG
GCTTCCGGCTACCGTCGGCGGGTGTGGTGATGAAGAAGCTGACGAGTGTGGTGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MCGEAFYGVASSFLKDIEWRIGNEINVEATRDPWIPKEGSCKPIYSHPNIRNFIVAQLMQPSRDWNVQLVKDSFLEHDATSILNIPIHPSSSSDEVIWHLDSRGIFSVKS
AYRLGMQLQVATEASVSIVQQREGLWKKFWKTKIPTKILICGWKLFDDILPTRVNLINRGMDIIPTCSLCRKAPESATHFFWECSCTRKAWQIFFSHSNVVFLDDRRGWT
IVDWCELIWGESRERGWEIQDISRSLIIIWQIWKHRNSVFHTNTQPDTKLLLHLIEKSMAELNREVEPDRGVVRSERIEDVEDDNQRTGWIPIQRGRWKLNCDASWSKRL
NRRGIGWILRRWDGSLVRADYRPVDRSWKICWLEATTLIEGLTTISTTSPAIRVEFDSLQTIRLLQGREEDITETSLFLNEARSLLTNLNVESIIHIPRGHNKMAHNLGH
KACESNSSEGWSNNFPNWLISLNREDIGNVELYSGVPVPPSHVLFSFMKGRTKRPTQRKTGPKGRANMTRPIWSASAKGRGRPFGPFARAEPGDLFSVPDAPNRPGSAWF
VPKHHRIPKNPRRTNRHRRRCGLHHAGVQRFLLVLQVTSSPVSINSLLVSREDLAAGKEPLVRAFSFPTGDLSNGTTHRSGHCPTQLPAAGSSRSPSRRRRFIPDLVAGN
ESLVARVLLPDGRSGRRRSSSACASFDRGSPDLSAGEEDLSGNFFSFLRLEKKEKREKREEKKSHRGWRAAAVGFRLPSAGVVMKKLTSVVKK