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Lag0016132 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016132
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr12:33722671..33723454
RNA-Seq ExpressionLag0016132
SyntenyLag0016132
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN45635.1 hypothetical protein Csa_005498 [Cucumis sativus]9.1e-1637.91Show/hide
Query:  VFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSLAF
        +FSL+++DP  DA ++L+    + A+I+CSPS FSL V + +    VA Q    FF +F F++  H S I +   +N +K   +Y   +L+   ++ L  
Subjt:  VFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSLAF

Query:  FRLQRRNGRQ--VLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ
          L+  + R    LIR+  +  +V+E+MG ID  TFVSIDSQ+FRR++    DY +VRVT T S V+FS     KE I  ++
Subjt:  FRLQRRNGRQ--VLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ

XP_008458677.1 PREDICTED: uncharacterized protein LOC103498005 [Cucumis melo]3.8e-1440.61Show/hide
Query:  DIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATK--YSTITLTLRQIQSLAFFRLQRRNGR-----QVLIRQ
        D A +KCSP  FSL +S   P    +LQ   PFFT+F   +      I +  FY+I+   T   YS++TL+L   Q L    LQ RN R     + L   
Subjt:  DIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATK--YSTITLTLRQIQSLAFFRLQRRNGR-----QVLIRQ

Query:  LSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ
          L+PS EE++G IDY  F SI+S  FR I  E  D+  + VT+T+S VKFS++   K+IIL K+
Subjt:  LSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ

XP_016903187.1 PREDICTED: uncharacterized protein LOC103502263 [Cucumis melo]2.9e-1436.96Show/hide
Query:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL
        M +  L   DPLFDAT  L  +  + A IK +P  FS+  SN SPRF   LQ     F ++   +  H S I L  F++ + +     ++T+ L      
Subjt:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL

Query:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYR--YVRVTVTSSRVKFSISFASKEIILTKQ
           R +  +    +  +LSLTPS EE++G +DY  F SIDS++ RR++     +    + VT T S+VKFSI  ASKEI+LTK+
Subjt:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYR--YVRVTVTSSRVKFSISFASKEIILTKQ

XP_022145570.1 uncharacterized protein LOC111014988 [Momordica charantia]1.8e-1640.76Show/hide
Query:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL
        M +  L  I PLFDA   LT + A  A +K SP+ F + VS ISP F  ALQ +  FFT F+   + H S I L   ++I+ +   Y  +T  L + Q+ 
Subjt:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL

Query:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRV--TVTSSRVKFSISFASKEIILTKQ
           R +         R+L L+PS EE++G IDY   VSI S EFR I+ + S Y   R+  T+T S+VKFS+  A++EIILTK+
Subjt:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRV--TVTSSRVKFSISFASKEIILTKQ

XP_031744101.1 uncharacterized protein LOC116404781 [Cucumis sativus]1.1e-1638.59Show/hide
Query:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL
        ML+FSL+++DP  DA ++L+    + A+I+CSPS FSL V + +    VA Q    FF +F F++  H S I +   +N +K   +Y   +L+   ++ L
Subjt:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL

Query:  AFFRLQRRNGRQ--VLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ
            L+  + R    LIR+  +  +V+E+MG ID  TFVSIDSQ+FRR++    DY +VRVT T S V+FS     KE I  ++
Subjt:  AFFRLQRRNGRQ--VLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ

TrEMBL top hitse value%identityAlignment
A0A0A0K7E0 Uncharacterized protein4.4e-1637.91Show/hide
Query:  VFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSLAF
        +FSL+++DP  DA ++L+    + A+I+CSPS FSL V + +    VA Q    FF +F F++  H S I +   +N +K   +Y   +L+   ++ L  
Subjt:  VFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSLAF

Query:  FRLQRRNGRQ--VLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ
          L+  + R    LIR+  +  +V+E+MG ID  TFVSIDSQ+FRR++    DY +VRVT T S V+FS     KE I  ++
Subjt:  FRLQRRNGRQ--VLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ

A0A1S3C8E9 uncharacterized protein LOC1034980051.8e-1440.61Show/hide
Query:  DIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATK--YSTITLTLRQIQSLAFFRLQRRNGR-----QVLIRQ
        D A +KCSP  FSL +S   P    +LQ   PFFT+F   +      I +  FY+I+   T   YS++TL+L   Q L    LQ RN R     + L   
Subjt:  DIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATK--YSTITLTLRQIQSLAFFRLQRRNGR-----QVLIRQ

Query:  LSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ
          L+PS EE++G IDY  F SI+S  FR I  E  D+  + VT+T+S VKFS++   K+IIL K+
Subjt:  LSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQ

A0A1S3C8J1 uncharacterized protein LOC1034980107.0e-1435.68Show/hide
Query:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL
        M +  L+  +PL DAT LL  +  D A +K +P    + VSN SP+F   LQ +   FT+FS  H+   S + L  F++ + +   +S++T+ L    + 
Subjt:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL

Query:  AFFRLQR-RNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRY--VRVTVTSSRVKFSISFASKEIILTKQ
           R +   +    L  +L+L+P   E +G+++Y  F ++ S+E RRI++E   +    V VTVT S+VKFSI   SKEIILTK+
Subjt:  AFFRLQR-RNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRY--VRVTVTSSRVKFSISFASKEIILTKQ

A0A1S4E4N8 uncharacterized protein LOC1035022631.4e-1436.96Show/hide
Query:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL
        M +  L   DPLFDAT  L  +  + A IK +P  FS+  SN SPRF   LQ     F ++   +  H S I L  F++ + +     ++T+ L      
Subjt:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL

Query:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYR--YVRVTVTSSRVKFSISFASKEIILTKQ
           R +  +    +  +LSLTPS EE++G +DY  F SIDS++ RR++     +    + VT T S+VKFSI  ASKEI+LTK+
Subjt:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYR--YVRVTVTSSRVKFSISFASKEIILTKQ

A0A6J1CUU8 uncharacterized protein LOC1110149888.9e-1740.76Show/hide
Query:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL
        M +  L  I PLFDA   LT + A  A +K SP+ F + VS ISP F  ALQ +  FFT F+   + H S I L   ++I+ +   Y  +T  L + Q+ 
Subjt:  MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSL

Query:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRV--TVTSSRVKFSISFASKEIILTKQ
           R +         R+L L+PS EE++G IDY   VSI S EFR I+ + S Y   R+  T+T S+VKFS+  A++EIILTK+
Subjt:  AFFRLQRRNGRQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRV--TVTSSRVKFSISFASKEIILTKQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTGTTCAGTCTTGACCACATCGATCCTCTTTTCGATGCAACATTTCTTCTTACTCTACTCATGGCTGACATTGCCCACATCAAATGCTCTCCTTCCACCTTCTC
CCTAACAGTCTCCAACATTTCCCCTCGCTTCACTGTCGCCCTCCAATTCGCCTCTCCATTCTTCACCCACTTTTCCTTCACTCACCATTATCACTATTCCAGCATTTTCC
TTTATGGCTTCTACAACATTGTCAAGGAAGCCACCAAATATTCCACAATCACTTTAACCCTTCGTCAAATCCAATCTCTTGCATTCTTTCGACTTCAAAGAAGGAATGGG
AGGCAAGTGTTGATTCGCCAATTGTCATTGACGCCTTCGGTAGAGGAGGAGATGGGCCGAATCGATTATACAACCTTTGTCTCAATTGATTCACAAGAGTTCAGACGCAT
CCTAGAAGAGTTTAGTGATTACAGATACGTTCGTGTTACTGTAACGAGTTCACGAGTCAAGTTCTCTATCTCTTTTGCAAGTAAGGAGATTATTCTTACCAAACAGGTAT
GGTGTTTTGATGTTCAAGAAGCTTACAATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTGGTGTTCAGTCTTGACCACATCGATCCTCTTTTCGATGCAACATTTCTTCTTACTCTACTCATGGCTGACATTGCCCACATCAAATGCTCTCCTTCCACCTTCTC
CCTAACAGTCTCCAACATTTCCCCTCGCTTCACTGTCGCCCTCCAATTCGCCTCTCCATTCTTCACCCACTTTTCCTTCACTCACCATTATCACTATTCCAGCATTTTCC
TTTATGGCTTCTACAACATTGTCAAGGAAGCCACCAAATATTCCACAATCACTTTAACCCTTCGTCAAATCCAATCTCTTGCATTCTTTCGACTTCAAAGAAGGAATGGG
AGGCAAGTGTTGATTCGCCAATTGTCATTGACGCCTTCGGTAGAGGAGGAGATGGGCCGAATCGATTATACAACCTTTGTCTCAATTGATTCACAAGAGTTCAGACGCAT
CCTAGAAGAGTTTAGTGATTACAGATACGTTCGTGTTACTGTAACGAGTTCACGAGTCAAGTTCTCTATCTCTTTTGCAAGTAAGGAGATTATTCTTACCAAACAGGTAT
GGTGTTTTGATGTTCAAGAAGCTTACAATTTGTAG
Protein sequenceShow/hide protein sequence
MLVFSLDHIDPLFDATFLLTLLMADIAHIKCSPSTFSLTVSNISPRFTVALQFASPFFTHFSFTHHYHYSSIFLYGFYNIVKEATKYSTITLTLRQIQSLAFFRLQRRNG
RQVLIRQLSLTPSVEEEMGRIDYTTFVSIDSQEFRRILEEFSDYRYVRVTVTSSRVKFSISFASKEIILTKQVWCFDVQEAYNL