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Lag0016138 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016138
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description60S ribosomal protein L11
Genome locationchr12:33767491..33768232
RNA-Seq ExpressionLag0016138
SyntenyLag0016138
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR002132 - Ribosomal protein L5
IPR022803 - Ribosomal protein L5 domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAA3026606.1 60S ribosomal L11-1-like [Olea europaea subsp. europaea]1.3e-0867.92Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFTSSYRHF
        MASEKKLSNPMR+IK+QKL+LNISVG+S DRLTRAAKV+    +   +  RHF
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFTSSYRHF

KAB5561312.1 hypothetical protein DKX38_006269 [Salix brachista]5.0e-0848.35Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKV---------------YTALKLRFTSSYRHFHGSVLGIGATPIRSPLNPLLIPK
        MASEKKLSNPMR+IK+QKL+LNISVG+S DRLTRAAKV               YT    R    Y  F G   G      R   +P L P+
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKV---------------YTALKLRFTSSYRHFHGSVLGIGATPIRSPLNPLLIPK

KAG8490113.1 hypothetical protein CXB51_016021 [Gossypium anomalum]2.3e-0874.47Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFT
        MASEKKLSNPMR+IK+QKL+LNISVG+S DRLTRA+KV   L  R+T
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFT

THU64159.1 hypothetical protein C4D60_Mb01t23540 [Musa balbisiana]1.3e-0866.07Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFTSSYRHFHGS
        +ASEKKLSNPMRDIK+QKL+LNISVGKS DRLTRAAKV   L +   +    ++GS
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFTSSYRHFHGS

XP_022926136.1 60S ribosomal protein L11-1 [Cucurbita moschata]8.6e-0883.33Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRAAKV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

TrEMBL top hitse value%identityAlignment
A0A0V0HFY0 Putative ovule protein4.2e-0883.33Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRAAKV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

A0A4S8JQC1 Ribosomal_L5_C domain-containing protein6.4e-0966.07Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFTSSYRHFHGS
        +ASEKKLSNPMRDIK+QKL+LNISVGKS DRLTRAAKV   L +   +    ++GS
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFTSSYRHFHGS

A0A5N5N212 Coatomer subunit gamma2.4e-0848.35Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKV---------------YTALKLRFTSSYRHFHGSVLGIGATPIRSPLNPLLIPK
        MASEKKLSNPMR+IK+QKL+LNISVG+S DRLTRAAKV               YT    R    Y  F G   G      R   +P L P+
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKV---------------YTALKLRFTSSYRHFHGSVLGIGATPIRSPLNPLLIPK

G7L8I9 50S ribosomal protein L5P4.2e-0883.33Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRAAKV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

K4CG62 Uncharacterized protein4.2e-0883.33Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRAAKV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

SwissProt top hitse value%identityAlignment
A2YDY2 60S ribosomal protein L113.6e-0976.19Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKK SNPMR+IK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

P42794 60S ribosomal protein L11-22.5e-1080.95Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

P42795 60S ribosomal protein L11-12.5e-1080.95Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

P46287 60S ribosomal protein L113.3e-1080.95Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMR+IK+QKL+LNISVG+S DRLTRAAKV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

Q0DK10 60S ribosomal protein L113.6e-0976.19Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKK SNPMR+IK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

Arabidopsis top hitse value%identityAlignment
AT2G42740.1 ribosomal protein large subunit 16A1.8e-1180.95Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

AT3G58700.1 Ribosomal L5P family protein1.8e-1180.95Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

AT4G18730.1 ribosomal protein L16B1.8e-1180.95Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

AT5G45775.1 Ribosomal L5P family protein5.0e-0675Show/hide
Query:  MRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MRDIK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MRDIKMQKLILNISVGKSEDRLTRAAKVYTAL

AT5G45775.2 Ribosomal L5P family protein1.8e-1180.95Show/hide
Query:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL
        MASEKKLSNPMRDIK+QKL+LNISVG+S DRLTRA+KV   L
Subjt:  MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCGGAGAAGAAGTTATCGAACCCTATGAGGGATATTAAGATGCAGAAACTCATTCTCAATATCTCAGTCGGTAAGAGCGAAGATCGACTTACCAGAGCTGCGAA
GGTTTACACTGCGTTAAAACTCCGCTTCACTTCCTCTTATCGCCACTTTCATGGCTCTGTCCTTGGAATCGGTGCTACCCCGATAAGGTCGCCTCTTAATCCTTTACTTA
TCCCCAAAATTTTTGGGTTCTATTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCGGAGAAGAAGTTATCGAACCCTATGAGGGATATTAAGATGCAGAAACTCATTCTCAATATCTCAGTCGGTAAGAGCGAAGATCGACTTACCAGAGCTGCGAA
GGTTTACACTGCGTTAAAACTCCGCTTCACTTCCTCTTATCGCCACTTTCATGGCTCTGTCCTTGGAATCGGTGCTACCCCGATAAGGTCGCCTCTTAATCCTTTACTTA
TCCCCAAAATTTTTGGGTTCTATTCTTAA
Protein sequenceShow/hide protein sequence
MASEKKLSNPMRDIKMQKLILNISVGKSEDRLTRAAKVYTALKLRFTSSYRHFHGSVLGIGATPIRSPLNPLLIPKIFGFYS