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Lag0016139 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016139
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr12:33776673..33780931
RNA-Seq ExpressionLag0016139
SyntenyLag0016139
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KYP37028.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]2.0e-4580.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
KYP38574.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]2.0e-4580.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
KYP66220.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]2.0e-4580.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
KYP69041.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]2.0e-4580.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
XP_022566413.1 uncharacterized protein LOC111210365, partial [Brassica napus]1.5e-4579.37Show/hide
Query:  KIVEKGYTELENDS-LSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        +IVEKG+ E ENDS LSQ Q+DGLRDSRKRDKKAL LIYQGLD+D FEK++ AKT+KEAWEKLQ SYKGA+ VKKVRLQTL+ EFE L MKEGE ISDYF
Subjt:  KIVEKGYTELENDS-LSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEK+
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
TrEMBL top hitse value%identityAlignment
A0A151R357 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-4680.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
A0A151R7G0 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-4680.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
A0A151RPT4 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-4680.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
A0A151TGP0 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-4680.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
A0A151TPU3 Retrovirus-related Pol polyprotein from transposon TNT 1-949.6e-4680.16Show/hide
Query:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF
        ++VEKG+TE EN +SLSQAQ+D LRDSRKRDKKAL LIYQGLD+D FEKIS  KTAKEAWEKL+ SYKGAD VKKVRLQTL+ EFE L+MKEGE +SDYF
Subjt:  KIVEKGYTELEN-DSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYF

Query:  SRVLTVTNQLKKNGEKLDDVKIMEKI
        SRVLTVTN LK+NGEKLDDV+IMEKI
Subjt:  SRVLTVTNQLKKNGEKLDDVKIMEKI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48720.1 unknown protein2.3e-1572.41Show/hide
Query:  KIVEKGYTELEND-SLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKE
        +IVEKG+ E EN+ SLSQ Q+DGLRDSRKRDKKAL LIYQGLD+D FEK+ EA +AK+
Subjt:  KIVEKGYTELEND-SLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTTTTTCAACCTTCAACGCATCCTTCGTTTTTTGAGATTAACCTTCCAAATCTCTCAAATTGGTGACACAGCCCACTTTGAATTCTGTAGGTCCAATCTCTCCCT
AAAAGTCTCCCACATTTCCCCTCACTTCATTGCAGAACTACGAATTCAATCTCTCTTCTTCGCCTATTACTTAACTGATGATTCACTGGATCATCATTGGACGATTTCGC
TCAAGCAATTGTGCAATCATGTGAGAGACGGCATGTTTGCTTCTTCATTGGTCTTCTCTCTTACCAACGAAACCCCACCTCACGCACTCATTACATTTCAGACTTCATTG
GAAGATTTCGCTCGAGCAGTTTTGCAATCATCCACTTCTGAGCTGGAAGATTTGTATCATCGTAAGATGATGTTGTCACATCTAGAAGATCAGCATAATGTAGGCGACTT
TAACTATCAAACTTTTTGCATAGTTCCTTCACAAGAGTTCAAGGACATTGTAATAGAGTTTAGAAATATTTCCCCAGTTACTGTTACTTTGACGGATTCACAAGTGAAGT
TTTCAAATACGGCATCCAACAAAGAGATTATTCTTACTGAAGCGGAAAGACGATGTACGATTACTATTCAAGCTGGGGAAGAAGTTCAGTTCCTAATCACGTTCCATCCC
GCGACGTTTTTTCATGATTTGACATCTTTTGCTGAAACGGTTTCAAATATCAGTCCATCATCAGAGAGGAATATAACTCACATCTTCCCATATGGTGCAGTAGAGATCAG
GAGCCCTGATTCTGACAAGACTTTTAAAGTGAATGGGCATCGACTCAAGATCTTGCACGAGGGTGAGTGTATTGCAGAGCTTGGGATTGTCGAGCTAGTTCTTTCGGACT
ATGAGGCGATGGAGTTGAACACTGATACGATCATAAGGAACGAGATGGTGACCTGTGGGAAAAAGAATGAAGGGAAGTTGTTCTCCCCTGCACTGATCACAAAATTATGC
AGGAAGATAGTGGAGAAAGGATACACCGAGTTGGAGAATGATAGTCTTTCTCAAGCACAAAGGGATGGTTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCT
AATCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACAGCGAAAGAAGCATGGGAGAAGCTTCAACCATCATACAAGGGAGCGGATCCCGTCA
AGAAGGTACGTCTTCAAACTTTAAAAGCTGAGTTTGAAACATTGAATATGAAAGAAGGGGAAGCCATCTCCGACTATTTTTCTAGAGTTTTAACGGTCACCAATCAACTT
AAGAAGAATGGTGAAAAGCTTGATGATGTAAAAATCATGGAGAAAATATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTTTTTCAACCTTCAACGCATCCTTCGTTTTTTGAGATTAACCTTCCAAATCTCTCAAATTGGTGACACAGCCCACTTTGAATTCTGTAGGTCCAATCTCTCCCT
AAAAGTCTCCCACATTTCCCCTCACTTCATTGCAGAACTACGAATTCAATCTCTCTTCTTCGCCTATTACTTAACTGATGATTCACTGGATCATCATTGGACGATTTCGC
TCAAGCAATTGTGCAATCATGTGAGAGACGGCATGTTTGCTTCTTCATTGGTCTTCTCTCTTACCAACGAAACCCCACCTCACGCACTCATTACATTTCAGACTTCATTG
GAAGATTTCGCTCGAGCAGTTTTGCAATCATCCACTTCTGAGCTGGAAGATTTGTATCATCGTAAGATGATGTTGTCACATCTAGAAGATCAGCATAATGTAGGCGACTT
TAACTATCAAACTTTTTGCATAGTTCCTTCACAAGAGTTCAAGGACATTGTAATAGAGTTTAGAAATATTTCCCCAGTTACTGTTACTTTGACGGATTCACAAGTGAAGT
TTTCAAATACGGCATCCAACAAAGAGATTATTCTTACTGAAGCGGAAAGACGATGTACGATTACTATTCAAGCTGGGGAAGAAGTTCAGTTCCTAATCACGTTCCATCCC
GCGACGTTTTTTCATGATTTGACATCTTTTGCTGAAACGGTTTCAAATATCAGTCCATCATCAGAGAGGAATATAACTCACATCTTCCCATATGGTGCAGTAGAGATCAG
GAGCCCTGATTCTGACAAGACTTTTAAAGTGAATGGGCATCGACTCAAGATCTTGCACGAGGGTGAGTGTATTGCAGAGCTTGGGATTGTCGAGCTAGTTCTTTCGGACT
ATGAGGCGATGGAGTTGAACACTGATACGATCATAAGGAACGAGATGGTGACCTGTGGGAAAAAGAATGAAGGGAAGTTGTTCTCCCCTGCACTGATCACAAAATTATGC
AGGAAGATAGTGGAGAAAGGATACACCGAGTTGGAGAATGATAGTCTTTCTCAAGCACAAAGGGATGGTTTGAGAGACTCAAGAAAGAGAGACAAGAAGGCTCTCTATCT
AATCTATCAAGGATTAGATGACGATGCTTTTGAGAAGATTTCAGAAGCAAAGACAGCGAAAGAAGCATGGGAGAAGCTTCAACCATCATACAAGGGAGCGGATCCCGTCA
AGAAGGTACGTCTTCAAACTTTAAAAGCTGAGTTTGAAACATTGAATATGAAAGAAGGGGAAGCCATCTCCGACTATTTTTCTAGAGTTTTAACGGTCACCAATCAACTT
AAGAAGAATGGTGAAAAGCTTGATGATGTAAAAATCATGGAGAAAATATAA
Protein sequenceShow/hide protein sequence
MLFFNLQRILRFLRLTFQISQIGDTAHFEFCRSNLSLKVSHISPHFIAELRIQSLFFAYYLTDDSLDHHWTISLKQLCNHVRDGMFASSLVFSLTNETPPHALITFQTSL
EDFARAVLQSSTSELEDLYHRKMMLSHLEDQHNVGDFNYQTFCIVPSQEFKDIVIEFRNISPVTVTLTDSQVKFSNTASNKEIILTEAERRCTITIQAGEEVQFLITFHP
ATFFHDLTSFAETVSNISPSSERNITHIFPYGAVEIRSPDSDKTFKVNGHRLKILHEGECIAELGIVELVLSDYEAMELNTDTIIRNEMVTCGKKNEGKLFSPALITKLC
RKIVEKGYTELENDSLSQAQRDGLRDSRKRDKKALYLIYQGLDDDAFEKISEAKTAKEAWEKLQPSYKGADPVKKVRLQTLKAEFETLNMKEGEAISDYFSRVLTVTNQL
KKNGEKLDDVKIMEKI