; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016150 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016150
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibonuclease H
Genome locationchr12:33997727..33998266
RNA-Seq ExpressionLag0016150
SyntenyLag0016150
Gene Ontology termsNA
InterPro domainsIPR021109 - Aspartic peptidase domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146774.1 uncharacterized protein LOC111015901 [Momordica charantia]8.0e-4351.76Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +   HND +V+TL +AN K++RIL+DGGSS D+ SLTA++AM LG ++LK SLTPL+GF GER+ P+G IEL +TF  
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
        E  ++T++V+FLVVD  S+YN IL R T+H ++AI STY Q +KFPT  GVG +K EQ+ SRECY+T ++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

XP_022150028.1 uncharacterized protein LOC111018300 [Momordica charantia]4.4e-4152.35Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y   + K    +EF+E E   +   HNDV+V+TL +AN K++RIL+DGGSS D++SLTA++AM LG +  K S   LV F GERV PEG  EL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
           ++T I++FLV+D  S+YNAILGR T+H +KAI STY Q + FPT  G+G +K EQ+ SRECY+T +K
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

XP_022155186.1 uncharacterized protein LOC111022321 [Momordica charantia]4.7e-4354.97Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +   HND +V+TL +ANVK++RIL+DGGSS D++S TA++AM LG K+LK S  PLVGF GERV  EG IEL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLKE
           +VTK+V+FLVV+  S+YNAILGR T+H +KAI STY Q  KFPT  GVG +K EQ+ SRECY T +++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLKE

XP_022156748.1 uncharacterized protein LOC111023587 [Momordica charantia]4.4e-4153.53Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +  SHND +V+TL +ANVK++RIL+DGGSS D++S TA++AM L  K+LK S  PLVGF GERV  EG IEL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
            VTK+V+FLVV+  S+YN ILGR T+H +K I STY Q +KFPT  GV  +K EQ+ SRECY+T ++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

XP_022158687.1 uncharacterized protein LOC111025147 [Momordica charantia]2.1e-4354.12Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +   HND +V+TL +ANVK++RIL+DGGSS D++S T ++ M LG K+LK S  PL+GF  ERV PEG IEL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
           +VTK+++FLVVD  S+YNAILGRST+H +KAI STY Q +KFPT  GVG +K EQ+ SRECY+T ++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

TrEMBL top hitse value%identityAlignment
A0A6J1CZ14 uncharacterized protein LOC1110159013.9e-4351.76Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +   HND +V+TL +AN K++RIL+DGGSS D+ SLTA++AM LG ++LK SLTPL+GF GER+ P+G IEL +TF  
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
        E  ++T++V+FLVVD  S+YN IL R T+H ++AI STY Q +KFPT  GVG +K EQ+ SRECY+T ++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

A0A6J1D8C9 uncharacterized protein LOC1110183002.1e-4152.35Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y   + K    +EF+E E   +   HNDV+V+TL +AN K++RIL+DGGSS D++SLTA++AM LG +  K S   LV F GERV PEG  EL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
           ++T I++FLV+D  S+YNAILGR T+H +KAI STY Q + FPT  G+G +K EQ+ SRECY+T +K
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

A0A6J1DQY2 uncharacterized protein LOC1110223212.3e-4354.97Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +   HND +V+TL +ANVK++RIL+DGGSS D++S TA++AM LG K+LK S  PLVGF GERV  EG IEL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLKE
           +VTK+V+FLVV+  S+YNAILGR T+H +KAI STY Q  KFPT  GVG +K EQ+ SRECY T +++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLKE

A0A6J1DRG9 uncharacterized protein LOC1110235872.1e-4153.53Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +  SHND +V+TL +ANVK++RIL+DGGSS D++S TA++AM L  K+LK S  PLVGF GERV  EG IEL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
            VTK+V+FLVV+  S+YN ILGR T+H +K I STY Q +KFPT  GV  +K EQ+ SRECY+T ++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

A0A6J1DXV4 uncharacterized protein LOC1110251471.0e-4354.12Show/hide
Query:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD
        +Y  ++      +EF+E E   +   HND +V+TL +ANVK++RIL+DGGSS D++S T ++ M LG K+LK S  PL+GF  ERV PEG IEL VTFG 
Subjt:  MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGD

Query:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK
           +VTK+++FLVVD  S+YNAILGRST+H +KAI STY Q +KFPT  GVG +K EQ+ SRECY+T ++
Subjt:  EQNTVTKIVNFLVVDCISAYNAILGRSTLHDMKAIASTY-QLLKFPTQNGVGVVKAEQKASRECYWTMLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTACTCTGTCCATCTAGTAAAGGCACACCCCCCTTTGGAGTTCACTGAGGCTGAGCCAGCAAGCATCCACCAGTCACATAATGATGTTATGGTGGTCACTTTAATGGT
AGCCAATGTGAAAATCTATCGGATTCTAATCGATGGAGGAAGTTCGGTTGATGTCCTTTCTCTAACAGCCTTTGAGGCAATGAAGTTAGGAAGAAAACTCTTAAAACCAA
GCCTTACCCCACTTGTAGGGTTTGAAGGGGAAAGGGTGACACCAGAGGGTAGCATAGAACTTCTCGTGACCTTTGGGGATGAACAAAATACAGTGACGAAGATAGTAAAC
TTCTTAGTCGTGGATTGTATTTCAGCCTACAATGCAATCTTGGGAAGGTCGACCTTGCATGATATGAAAGCCATAGCTTCAACTTATCAGTTGCTGAAGTTTCCAACTCA
GAATGGTGTAGGAGTTGTCAAAGCGGAACAGAAGGCATCAAGGGAGTGTTACTGGACAATGTTGAAAGAAGTTAAGCCACTGAGGGCTAAGACCAACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTACTCTGTCCATCTAGTAAAGGCACACCCCCCTTTGGAGTTCACTGAGGCTGAGCCAGCAAGCATCCACCAGTCACATAATGATGTTATGGTGGTCACTTTAATGGT
AGCCAATGTGAAAATCTATCGGATTCTAATCGATGGAGGAAGTTCGGTTGATGTCCTTTCTCTAACAGCCTTTGAGGCAATGAAGTTAGGAAGAAAACTCTTAAAACCAA
GCCTTACCCCACTTGTAGGGTTTGAAGGGGAAAGGGTGACACCAGAGGGTAGCATAGAACTTCTCGTGACCTTTGGGGATGAACAAAATACAGTGACGAAGATAGTAAAC
TTCTTAGTCGTGGATTGTATTTCAGCCTACAATGCAATCTTGGGAAGGTCGACCTTGCATGATATGAAAGCCATAGCTTCAACTTATCAGTTGCTGAAGTTTCCAACTCA
GAATGGTGTAGGAGTTGTCAAAGCGGAACAGAAGGCATCAAGGGAGTGTTACTGGACAATGTTGAAAGAAGTTAAGCCACTGAGGGCTAAGACCAACTAG
Protein sequenceShow/hide protein sequence
MYSVHLVKAHPPLEFTEAEPASIHQSHNDVMVVTLMVANVKIYRILIDGGSSVDVLSLTAFEAMKLGRKLLKPSLTPLVGFEGERVTPEGSIELLVTFGDEQNTVTKIVN
FLVVDCISAYNAILGRSTLHDMKAIASTYQLLKFPTQNGVGVVKAEQKASRECYWTMLKEVKPLRAKTN