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Lag0016153 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016153
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionArginine decarboxylase
Genome locationchr12:34024504..34024872
RNA-Seq ExpressionLag0016153
SyntenyLag0016153
Gene Ontology termsGO:0006527 - arginine catabolic process (biological process)
GO:0008295 - spermidine biosynthetic process (biological process)
GO:0009409 - response to cold (biological process)
GO:0033388 - putrescine biosynthetic process from arginine (biological process)
GO:0008792 - arginine decarboxylase activity (molecular function)
InterPro domainsIPR002985 - Arginine decarboxylase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN61856.1 hypothetical protein Csa_006231 [Cucumis sativus]5.8e-5385Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCDRR+VKHPIICSE+GRAIVSHHS+LIFE VSAS+YEVPSMSSLELQYLVDGLT++AR+DY NLS   YMGEYKTCL++ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALV+
Subjt:  DGCLGMEQLAAVDGLCALVS

NP_001295829.1 arginine decarboxylase [Cucumis sativus]4.2e-5183.33Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCD R+VKHPIICSE+GRAIVS HS+LIFE VSAS+YEVPSMSSLELQYLVDGLT++AR+DY NLS   YMGEYKTCL++ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALV+
Subjt:  DGCLGMEQLAAVDGLCALVS

XP_008461023.1 PREDICTED: arginine decarboxylase [Cucumis melo]2.0e-5385.83Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCDRR+VKHPIICSE+GRAIVSHHS+LIFE VSAS+YEVPSMSSLELQYLVDGLT+DAR+DY NLS   YMGEYKTCL++ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALV+
Subjt:  DGCLGMEQLAAVDGLCALVS

XP_022146142.1 arginine decarboxylase [Momordica charantia]3.4e-5385.83Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VV+ +RC CDRR+VKHPIICSE+GRAIVSHHS+LIFE VSASTYEVPSM+SLELQYLVDGLT+DAR+DY NLS   YMGEYKTCLL+ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALVS
Subjt:  DGCLGMEQLAAVDGLCALVS

XP_038900377.1 arginine decarboxylase [Benincasa hispida]1.5e-5385.83Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCDRR+VKHPIICSE+GRAIVSHHS+LIFE VSAS+YE PSMSSLELQYLVDGLT+DAR+DY NLS   YMGEYKTCLL+ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCAL+S
Subjt:  DGCLGMEQLAAVDGLCALVS

TrEMBL top hitse value%identityAlignment
A0A0A0LPF5 Arginine decarboxylase2.8e-5385Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCDRR+VKHPIICSE+GRAIVSHHS+LIFE VSAS+YEVPSMSSLELQYLVDGLT++AR+DY NLS   YMGEYKTCL++ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALV+
Subjt:  DGCLGMEQLAAVDGLCALVS

A0A1S3CDT1 Arginine decarboxylase9.7e-5485.83Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCDRR+VKHPIICSE+GRAIVSHHS+LIFE VSAS+YEVPSMSSLELQYLVDGLT+DAR+DY NLS   YMGEYKTCL++ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALV+
Subjt:  DGCLGMEQLAAVDGLCALVS

A0A5D3BSF0 Arginine decarboxylase9.7e-5485.83Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCDRR+VKHPIICSE+GRAIVSHHS+LIFE VSAS+YEVPSMSSLELQYLVDGLT+DAR+DY NLS   YMGEYKTCL++ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALV+
Subjt:  DGCLGMEQLAAVDGLCALVS

A0A6J1CYS1 Arginine decarboxylase1.7e-5385.83Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VV+ +RC CDRR+VKHPIICSE+GRAIVSHHS+LIFE VSASTYEVPSM+SLELQYLVDGLT+DAR+DY NLS   YMGEYKTCLL+ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALVS
Subjt:  DGCLGMEQLAAVDGLCALVS

Q7Y235 Arginine decarboxylase2.0e-5183.33Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VVD +RCVCD R+VKHPIICSE+GRAIVS HS+LIFE VSAS+YEVPSMSSLELQYLVDGLT++AR+DY NLS   YMGEYKTCL++ADQLKQRC+EKFK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        DGCLGMEQLAAVDGLCALV+
Subjt:  DGCLGMEQLAAVDGLCALVS

SwissProt top hitse value%identityAlignment
O23141 Arginine decarboxylase 21.3e-3155.46Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VV ++R VCDR +VKHP+ICSE+GRAIVSHHS+LIFE VSA    V   +  ++Q+L++G  E+AR +Y +L   +  G++++CLL+ DQLKQRC+E FK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALV
        +G L +EQLA+VDGLC  V
Subjt:  DGCLGMEQLAAVDGLCALV

O82475 Arginine decarboxylase7.0e-3356.67Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VV ++R VCD+++VKHP+ICSE+GRAIVSHHS+LIFE VSA      + S  +LQ+L++G +E+AR DY NL   +  G+ ++CLL+ DQLKQRC+E+FK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
        +G L +EQLA VDGLC  V+
Subjt:  DGCLGMEQLAAVDGLCALVS

P49726 Arginine decarboxylase1.5e-3564.46Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSM-SSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKF
        VV  +  VCDR+  KHP+ICSE+GRAIVSHHSILIFE VSAST  V +  SS  LQ LV+ L EDAR DY NLS     GEY TCL+++DQLKQRC+E+F
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSM-SSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKF

Query:  KDGCLGMEQLAAVDGLCALVS
        KDG L +EQLAAVD +C  VS
Subjt:  KDGCLGMEQLAAVDGLCALVS

Q43075 Arginine decarboxylase1.5e-3862.5Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VV  ++ VCDR+ VKHP+ICSE+GRAIVSHHSILIFE   AST   PS+SS+ELQYL +GL+E+A  DY N+S     GEY+ CLL+ +Q K+RC+E+FK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALVS
         G LG+EQLAAVDGLC L++
Subjt:  DGCLGMEQLAAVDGLCALVS

Q96412 Arginine decarboxylase2.3e-3661.48Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSM--SSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEK
        VV T+  VCDR+ VK P+ICSE+ RAIVSHHSIL+FE VS+S+   P M  S+L L YLVDGLT++ + +Y +L+     GEY++CL+++  LKQRC+E 
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSM--SSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEK

Query:  FKDGCLGMEQLAAVDGLCALVS
        FKDGCLGMEQLAAVDGLC LVS
Subjt:  FKDGCLGMEQLAAVDGLCALVS

Arabidopsis top hitse value%identityAlignment
AT2G16500.1 arginine decarboxylase 12.1e-3255.83Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSA-STYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKF
        VV ++R VCD+++VKHP+ICSE+GRAIVSHHS+LIFE VSA   +E P+    + Q++++G +E+ R DY NL      G+ ++CLL+ DQLKQRC+E F
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSA-STYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKF

Query:  KDGCLGMEQLAAVDGLCALV
        K+G LG+EQLA VDGLC  V
Subjt:  KDGCLGMEQLAAVDGLCALV

AT4G34710.1 arginine decarboxylase 29.4e-3355.46Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VV ++R VCDR +VKHP+ICSE+GRAIVSHHS+LIFE VSA    V   +  ++Q+L++G  E+AR +Y +L   +  G++++CLL+ DQLKQRC+E FK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALV
        +G L +EQLA+VDGLC  V
Subjt:  DGCLGMEQLAAVDGLCALV

AT4G34710.2 arginine decarboxylase 29.4e-3355.46Show/hide
Query:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK
        VV ++R VCDR +VKHP+ICSE+GRAIVSHHS+LIFE VSA    V   +  ++Q+L++G  E+AR +Y +L   +  G++++CLL+ DQLKQRC+E FK
Subjt:  VVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFK

Query:  DGCLGMEQLAAVDGLCALV
        +G L +EQLA+VDGLC  V
Subjt:  DGCLGMEQLAAVDGLCALV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGTTGATACAATCCGTTGTGTATGCGACCGTAGGGCCGTCAAGCACCCAATAATCTGCAGTGAAAATGGACGAGCAATCGTCTCTCATCACTCTATTCTGATTTT
TGAGGTCGTTTCTGCTAGCACTTATGAGGTTCCATCCATGAGCTCGCTTGAACTTCAGTATCTTGTTGATGGGCTGACAGAAGATGCTCGAATTGATTATCATAACCTTT
CGACTACAATTTATATGGGTGAGTACAAGACATGCTTGCTATTTGCAGACCAATTGAAACAACGATGCCTTGAGAAATTCAAGGATGGGTGTTTGGGAATGGAACAACTA
GCTGCGGTGGATGGGCTTTGTGCTCTTGTTTCACCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGTTGATACAATCCGTTGTGTATGCGACCGTAGGGCCGTCAAGCACCCAATAATCTGCAGTGAAAATGGACGAGCAATCGTCTCTCATCACTCTATTCTGATTTT
TGAGGTCGTTTCTGCTAGCACTTATGAGGTTCCATCCATGAGCTCGCTTGAACTTCAGTATCTTGTTGATGGGCTGACAGAAGATGCTCGAATTGATTATCATAACCTTT
CGACTACAATTTATATGGGTGAGTACAAGACATGCTTGCTATTTGCAGACCAATTGAAACAACGATGCCTTGAGAAATTCAAGGATGGGTGTTTGGGAATGGAACAACTA
GCTGCGGTGGATGGGCTTTGTGCTCTTGTTTCACCTTGA
Protein sequenceShow/hide protein sequence
MVVDTIRCVCDRRAVKHPIICSENGRAIVSHHSILIFEVVSASTYEVPSMSSLELQYLVDGLTEDARIDYHNLSTTIYMGEYKTCLLFADQLKQRCLEKFKDGCLGMEQL
AAVDGLCALVSP