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Lag0016163 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016163
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionProtein Ycf2-like
Genome locationchr12:34170616..34172365
RNA-Seq ExpressionLag0016163
SyntenyLag0016163
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060374.1 uncharacterized protein E6C27_scaffold22G001730 [Cucumis melo var. makuwa]5.1e-2852.68Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ +TG + + I LLDDE  FD YPWGR+ Y+  +DSIKK+IKN  AL VGI GF ++LLVW Y+C+PLL  P++ CAQK+      ++NW+ + HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENEN
        K+L  +VF +E+
Subjt:  KDLTIKVFENEN

XP_022132727.1 uncharacterized protein LOC111005524 [Momordica charantia]3.0e-2854.39Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ +TGI  +   L+DD+ QF+ YPWGR++Y  T+D +KKAIK+ DA  +GI GF +ALLVWAYE IPLLS  + + A K+S  MP+M NWVA+ HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFE
        +DL+ K+F +++F+
Subjt:  KDLTIKVFENENFE

XP_038883715.1 uncharacterized protein LOC120074618 isoform X1 [Benincasa hispida]5.7e-2750.4Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ  TGI  +   L+DD+ QFD+YPWGR++Y  T+D +KKAIK+ DA  +GI G   ALLVWAYE IPLL   +   A +VS   P+M NW AD HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFEFYEMMDEREEV
        KDL+ KVF++++F+   ++  + E+
Subjt:  KDLTIKVFENENFEFYEMMDEREEV

XP_038883717.1 uncharacterized protein LOC120074618 isoform X3 [Benincasa hispida]5.7e-2750.4Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ  TGI  +   L+DD+ QFD+YPWGR++Y  T+D +KKAIK+ DA  +GI G   ALLVWAYE IPLL   +   A +VS   P+M NW AD HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFEFYEMMDEREEV
        KDL+ KVF++++F+   ++  + E+
Subjt:  KDLTIKVFENENFEFYEMMDEREEV

XP_038883719.1 uncharacterized protein LOC120074618 isoform X5 [Benincasa hispida]5.7e-2750.4Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ  TGI  +   L+DD+ QFD+YPWGR++Y  T+D +KKAIK+ DA  +GI G   ALLVWAYE IPLL   +   A +VS   P+M NW AD HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFEFYEMMDEREEV
        KDL+ KVF++++F+   ++  + E+
Subjt:  KDLTIKVFENENFEFYEMMDEREEV

TrEMBL top hitse value%identityAlignment
A0A1S3B065 uncharacterized protein LOC103484737 isoform X44.7e-2749.6Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ  TGI  +   L+DD+ QFD YPWGR++Y  T+D +KKAIK+ DA  +G+ GF  AL VWAYE IPLL+  +   A ++S   P+M NW AD HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFEFYEMMDEREEV
        KDL+ KVF++E F+   ++    E+
Subjt:  KDLTIKVFENENFEFYEMMDEREEV

A0A1S3B0L9 uncharacterized protein LOC103484737 isoform X54.7e-2749.6Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ  TGI  +   L+DD+ QFD YPWGR++Y  T+D +KKAIK+ DA  +G+ GF  AL VWAYE IPLL+  +   A ++S   P+M NW AD HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFEFYEMMDEREEV
        KDL+ KVF++E F+   ++    E+
Subjt:  KDLTIKVFENENFEFYEMMDEREEV

A0A1S3B181 uncharacterized protein LOC103484737 isoform X74.7e-2749.6Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ  TGI  +   L+DD+ QFD YPWGR++Y  T+D +KKAIK+ DA  +G+ GF  AL VWAYE IPLL+  +   A ++S   P+M NW AD HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFEFYEMMDEREEV
        KDL+ KVF++E F+   ++    E+
Subjt:  KDLTIKVFENENFEFYEMMDEREEV

A0A5A7UZA2 DUF1985 domain-containing protein2.5e-2852.68Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ +TG + + I LLDDE  FD YPWGR+ Y+  +DSIKK+IKN  AL VGI GF ++LLVW Y+C+PLL  P++ CAQK+      ++NW+ + HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENEN
        K+L  +VF +E+
Subjt:  KDLTIKVFENEN

A0A6J1BX50 uncharacterized protein LOC1110055241.5e-2854.39Show/hide
Query:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW
        GKQ +TGI  +   L+DD+ QF+ YPWGR++Y  T+D +KKAIK+ DA  +GI GF +ALLVWAYE IPLLS  + + A K+S  MP+M NWVA+ HPEW
Subjt:  GKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEW

Query:  KDLTIKVFENENFE
        +DL+ K+F +++F+
Subjt:  KDLTIKVFENENFE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G10260.1 FUNCTIONS IN: molecular_function unknown2.5e-0439.22Show/hide
Query:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECI
        D + F++YPWG +A+ + + S+K    + +   V I G +HALL+W YE I
Subjt:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECI

AT2G10260.2 FUNCTIONS IN: molecular_function unknown2.5e-0439.22Show/hide
Query:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECI
        D + F++YPWG +A+ + + S+K    + +   V I G +HALL+W YE I
Subjt:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECI

AT3G31910.1 Domain of unknown function (DUF1985)7.7e-0638.46Show/hide
Query:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIP
        D + F++YPWGR+A+ + ++S+K    + D+ V  I   +HAL++W YE +P
Subjt:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIP

AT4G08430.1 Ulp1 protease family protein4.5e-0644.23Show/hide
Query:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIP
        D + F++YPWGR+A+ + L S+K    + D+ V  I G + ALLVW YE +P
Subjt:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIP

AT5G45570.1 Ulp1 protease family protein6.5e-0540.38Show/hide
Query:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIP
        D + F++YPWGR+A+ +   S+K    + D+ V  I G +  LLVW YE +P
Subjt:  DEIQFDQYPWGRLAYSTTLDSIKKAIKNTDALVVGIVGFLHALLVWAYECIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGCAGAAAAGCAACTAAAAAAGGCAATGAAAATGAGGTTGTGACAATAGATTCGAAGAAAGAAAGCTCGGAATCTCTATCTGCGAATATGTCTGGTGAACAAAG
CCAAGAATTTGAGCGGAATGTAGGACAAGAAAACGAACAGGAGATTGAGCAAACACAGCAAATAACAACAGAACAGGAAGGGGAAACGAAAACAAACTCAACAAAATCCC
AAGGGAAGCAAGAAAGCACGGGGATAGAGATGGATATCATTAATTTGTTGGATGATGAAATTCAATTTGATCAATATCCTTGGGGTCGTCTGGCATATTCCACAACTTTA
GATTCTATAAAGAAGGCTATAAAGAATACGGATGCATTGGTAGTAGGAATAGTTGGATTCCTGCATGCACTGTTGGTCTGGGCATATGAGTGCATCCCTCTTCTATCTGG
ACCCACGATGATTTGTGCCCAAAAGGTGTCAAGAAGGATGCCTAAAATGATCAACTGGGTTGCTGATTGCCATCCAGAGTGGAAGGATTTGACAATTAAGGTCTTCGAGA
ATGAAAATTTTGAGTTCTATGAGATGATGGATGAAAGAGAAGAAGTTTTGTTCCATGGTGGAAACAACAGAGCAGAGGAAGGACAACATTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTAGCAGAAAAGCAACTAAAAAAGGCAATGAAAATGAGGTTGTGACAATAGATTCGAAGAAAGAAAGCTCGGAATCTCTATCTGCGAATATGTCTGGTGAACAAAG
CCAAGAATTTGAGCGGAATGTAGGACAAGAAAACGAACAGGAGATTGAGCAAACACAGCAAATAACAACAGAACAGGAAGGGGAAACGAAAACAAACTCAACAAAATCCC
AAGGGAAGCAAGAAAGCACGGGGATAGAGATGGATATCATTAATTTGTTGGATGATGAAATTCAATTTGATCAATATCCTTGGGGTCGTCTGGCATATTCCACAACTTTA
GATTCTATAAAGAAGGCTATAAAGAATACGGATGCATTGGTAGTAGGAATAGTTGGATTCCTGCATGCACTGTTGGTCTGGGCATATGAGTGCATCCCTCTTCTATCTGG
ACCCACGATGATTTGTGCCCAAAAGGTGTCAAGAAGGATGCCTAAAATGATCAACTGGGTTGCTGATTGCCATCCAGAGTGGAAGGATTTGACAATTAAGGTCTTCGAGA
ATGAAAATTTTGAGTTCTATGAGATGATGGATGAAAGAGAAGAAGTTTTGTTCCATGGTGGAAACAACAGAGCAGAGGAAGGACAACATTTCTAA
Protein sequenceShow/hide protein sequence
MVSRKATKKGNENEVVTIDSKKESSESLSANMSGEQSQEFERNVGQENEQEIEQTQQITTEQEGETKTNSTKSQGKQESTGIEMDIINLLDDEIQFDQYPWGRLAYSTTL
DSIKKAIKNTDALVVGIVGFLHALLVWAYECIPLLSGPTMICAQKVSRRMPKMINWVADCHPEWKDLTIKVFENENFEFYEMMDEREEVLFHGGNNRAEEGQHF