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Lag0016167 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016167
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:34189928..34192499
RNA-Seq ExpressionLag0016167
SyntenyLag0016167
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAV73178.1 Exo_endo_phos domain-containing protein [Cephalotus follicularis]5.0e-0937.11Show/hide
Query:  DMVFRSFSKGYIDATIKEDGWT--WRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN-----------------KKAIDSCQLIESGFTG
        D++ +S+S  +ID+ IK  G    WR +G+YG P   LRHETW L+  L    DL WL  GDFN                 ++ +D+C+L + GF G
Subjt:  DMVFRSFSKGYIDATIKEDGWT--WRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN-----------------KKAIDSCQLIESGFTG

KAG0535857.1 hypothetical protein BDA96_03G014100 [Sorghum bicolor]3.8e-0938.46Show/hide
Query:  DMVFRSFSKGYIDATIKE-DGWTWRFSGIYGNPNWDLRHETWQLMKRLEENY---DLLWLLEGDFN----------------------KKAIDSCQLIES
        D++ R  SK YID  IKE DG  WRF+GIYG    +L+HETW +M+ L + Y    + WL  GDFN                      K+A++ C L + 
Subjt:  DMVFRSFSKGYIDATIKE-DGWTWRFSGIYGNPNWDLRHETWQLMKRLEENY---DLLWLLEGDFN----------------------KKAIDSCQLIES

Query:  GFTG
        GF+G
Subjt:  GFTG

TXG51391.1 hypothetical protein EZV62_023915 [Acer yangbiense]2.2e-0938.14Show/hide
Query:  SFSKGYIDATI-KEDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP
        SFS G+IDA + KEDG+ WRF G YG PN   RH +W L++RL++  +L W+   DFN                      ++ +D C L + GF GP
Subjt:  SFSKGYIDATI-KEDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP

TXG60811.1 hypothetical protein EZV62_012174 [Acer yangbiense]1.5e-1039.22Show/hide
Query:  DMVFRSFSKGYIDATIK-EDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFT
        D+   SFS G+IDA I+ EDG+ WRFSG YG+PN   R  +W L++RL E   L W+  GDFN                      ++A++ C LI+ G++
Subjt:  DMVFRSFSKGYIDATIK-EDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFT

Query:  GP
        GP
Subjt:  GP

TXG63522.1 hypothetical protein EZV62_010516 [Acer yangbiense]9.1e-1142.27Show/hide
Query:  SFSKGYIDATIKED-GWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP
        S+S G+IDA I ED G  WRFSGIYG+PN   R  TW LM+RL+E  +L W+  GDFN                      ++ +D C+ I+ GF+GP
Subjt:  SFSKGYIDATIKED-GWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP

TrEMBL top hitse value%identityAlignment
A0A1Q3BZB3 Exo_endo_phos domain-containing protein2.4e-0937.11Show/hide
Query:  DMVFRSFSKGYIDATIKEDGWT--WRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN-----------------KKAIDSCQLIESGFTG
        D++ +S+S  +ID+ IK  G    WR +G+YG P   LRHETW L+  L    DL WL  GDFN                 ++ +D+C+L + GF G
Subjt:  DMVFRSFSKGYIDATIKEDGWT--WRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN-----------------KKAIDSCQLIESGFTG

A0A5C7H399 CCHC-type domain-containing protein1.1e-0938.14Show/hide
Query:  SFSKGYIDATI-KEDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP
        SFS G+IDA + KEDG+ WRF G YG PN   RH +W L++RL++  +L W+   DFN                      ++ +D C L + GF GP
Subjt:  SFSKGYIDATI-KEDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP

A0A5C7H3Y3 CCHC-type domain-containing protein4.1e-0949.33Show/hide
Query:  SFSKGYIDATIK-EDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFNKKAIDSCQLIESGFTGP
        S+S G+IDA IK EDG+ WRFSG+YGNP+ + R  +W+L+ RL          E D  ++AID C LIE G +GP
Subjt:  SFSKGYIDATIK-EDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFNKKAIDSCQLIESGFTGP

A0A5C7HUN0 Uncharacterized protein7.5e-1139.22Show/hide
Query:  DMVFRSFSKGYIDATIK-EDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFT
        D+   SFS G+IDA I+ EDG+ WRFSG YG+PN   R  +W L++RL E   L W+  GDFN                      ++A++ C LI+ G++
Subjt:  DMVFRSFSKGYIDATIK-EDGWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFT

Query:  GP
        GP
Subjt:  GP

A0A5C7I4W9 RNase H domain-containing protein4.4e-1142.27Show/hide
Query:  SFSKGYIDATIKED-GWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP
        S+S G+IDA I ED G  WRFSGIYG+PN   R  TW LM+RL+E  +L W+  GDFN                      ++ +D C+ I+ GF+GP
Subjt:  SFSKGYIDATIKED-GWTWRFSGIYGNPNWDLRHETWQLMKRLEENYDLLWLLEGDFN----------------------KKAIDSCQLIESGFTGP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACGGTGGCGGCTGATCGACAACGATCGGTAGTCGGAGGTCAACAGCGACGGCCGATCAGTGGAGGTCAGCGGCGGCCGATCGTCAGAAGTCAACGGTTGCGAGA
AAAGATTGCTAAGAATGTTCATATCAAGAAGCGCATCAAGGAATCCGGACCATGGTTTTTTGACAAAGTTGTAATTCTGATGGAGGAACCTAAGGGGAACATAAGTGTCG
AGGACATGGTTTTCAGATCCTTCTCTAAAGGATACATTGATGCTACGATTAAGGAGGACGGTTGGACGTGGAGGTTTTCAGGCATTTATGGCAATCCAAATTGGGATCTT
CGCCATGAAACGTGGCAACTTATGAAGAGATTAGAGGAAAATTATGATCTTCTGTGGTTGCTCGAAGGCGATTTTAACAAAAAAGCAATAGATTCTTGTCAATTGATAGA
GTCTGGATTCACTGGGCCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAACGGTGGCGGCTGATCGACAACGATCGGTAGTCGGAGGTCAACAGCGACGGCCGATCAGTGGAGGTCAGCGGCGGCCGATCGTCAGAAGTCAACGGTTGCGAGA
AAAGATTGCTAAGAATGTTCATATCAAGAAGCGCATCAAGGAATCCGGACCATGGTTTTTTGACAAAGTTGTAATTCTGATGGAGGAACCTAAGGGGAACATAAGTGTCG
AGGACATGGTTTTCAGATCCTTCTCTAAAGGATACATTGATGCTACGATTAAGGAGGACGGTTGGACGTGGAGGTTTTCAGGCATTTATGGCAATCCAAATTGGGATCTT
CGCCATGAAACGTGGCAACTTATGAAGAGATTAGAGGAAAATTATGATCTTCTGTGGTTGCTCGAAGGCGATTTTAACAAAAAAGCAATAGATTCTTGTCAATTGATAGA
GTCTGGATTCACTGGGCCATAA
Protein sequenceShow/hide protein sequence
MSTVAADRQRSVVGGQQRRPISGGQRRPIVRSQRLREKIAKNVHIKKRIKESGPWFFDKVVILMEEPKGNISVEDMVFRSFSKGYIDATIKEDGWTWRFSGIYGNPNWDL
RHETWQLMKRLEENYDLLWLLEGDFNKKAIDSCQLIESGFTGP