; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016197 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016197
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionRibosomal RNA adenine dimethylase family protein
Genome locationchr12:34634292..34634840
RNA-Seq ExpressionLag0016197
SyntenyLag0016197
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574778.1 hypothetical protein SDJN03_25417, partial [Cucurbita argyrosperma subsp. sororia]3.2e-7183.06Show/hide
Query:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM
        ME MAEG A PSLPDLVLSLEQASFMAKQL STSNP HLLQIYNSLHQA+LNLS+FLS  H+PQS      LPLP PSIN+N LSSATSAAFND  ++PM
Subjt:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM

Query:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        QVGDDEDADAE NSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAA+AEERRVHRD+RF A AKGFDP  ERLRALDLISQFHA
Subjt:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

XP_011656677.1 uncharacterized protein LOC105435764 [Cucumis sativus]1.0e-6983.06Show/hide
Query:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM
        MEAMA+G APPSL DL+LSL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLSLFLS TH PQSLP  LPLPLP PSINE SLSSATSAAF+     PM
Subjt:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM

Query:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        QVGDD+DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF A  KGFDP  ERLRALDLISQFHA
Subjt:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

XP_022156139.1 uncharacterized protein LOC111023095 [Momordica charantia]3.8e-7283.52Show/hide
Query:  MEAMAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQ
        MEAMAEGA PSLPDLVLSLEQASFMAKQLPSTSNP+HLLQIYNSLHQA+ NLS+FLS T FPQS      LPLPRPS+NENSLSSATSAAFNDD ++PMQ
Subjt:  MEAMAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQ

Query:  VGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        VGDD     E NSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AA+AEERR+HRDDRFGA +KGFDPR ERLRALDLISQFHA
Subjt:  VGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

XP_023548054.1 uncharacterized protein LOC111806806 [Cucurbita pepo subsp. pepo]3.0e-6980.75Show/hide
Query:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM
        ME MAEG A PSLPDLVLSLEQASFMAKQL STSNP HLLQIYNSLHQA+LNLS+FLS  H+PQS      LP+P PSIN+N LSSATSAAFND  ++PM
Subjt:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM

Query:  QVGDDE----DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        QVGDDE    DADAE NSKGTIEMVEEKMKDCFIKNKRVKR+LSPSAAA+AEERRVHRD+RF A AKGFDP  ERLRALDLISQFHA
Subjt:  QVGDDE----DADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

XP_038876419.1 uncharacterized protein LOC120068853 [Benincasa hispida]6.2e-7585.71Show/hide
Query:  MEAMAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQ
        MEAMAEGA PSL DL+LSLEQASFMAKQLPS+SNPTHLLQIYNSLHQA+LNLSLFLS+T F QS      LPLPRPSINENSLSSATSAAFNDD ++PMQ
Subjt:  MEAMAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQ

Query:  VGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        VGDD+DADAEH+SKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVHRD+RF A  KGFDP  ERLRALDLISQFHA
Subjt:  VGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

TrEMBL top hitse value%identityAlignment
A0A0A0KBH1 Uncharacterized protein5.0e-7083.06Show/hide
Query:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM
        MEAMA+G APPSL DL+LSL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLSLFLS TH PQSLP  LPLPLP PSINE SLSSATSAAF+     PM
Subjt:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM

Query:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        QVGDD+DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF A  KGFDP  ERLRALDLISQFHA
Subjt:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

A0A1S3CC06 uncharacterized protein LOC1034990582.5e-6680.33Show/hide
Query:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM
        ME MAEG APPSL DL+ SL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLSLFLS TH PQS      LPLP PSINE SLSSATSAAF+     PM
Subjt:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM

Query:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        QVGDD+DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF A  KGFDP  ERLRALDLISQFHA
Subjt:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

A0A5D3DLF5 Putative AP2-like ethylene-responsive transcription factor SNZ2.5e-6680.33Show/hide
Query:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM
        ME MAEG APPSL DL+ SL+QA+FMAKQLPSTSNPTHLLQIYNSLHQA+LNLSLFLS TH PQS      LPLP PSINE SLSSATSAAF+     PM
Subjt:  MEAMAEG-APPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPM

Query:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        QVGDD+DADA  NSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAA+AEERRVH  +RF A  KGFDP  ERLRALDLISQFHA
Subjt:  QVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

A0A6J1DSG3 uncharacterized protein LOC1110230951.8e-7283.52Show/hide
Query:  MEAMAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQ
        MEAMAEGA PSLPDLVLSLEQASFMAKQLPSTSNP+HLLQIYNSLHQA+ NLS+FLS T FPQS      LPLPRPS+NENSLSSATSAAFNDD ++PMQ
Subjt:  MEAMAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQ

Query:  VGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
        VGDD     E NSKG+IEMVEEKMKDCFIKNKRVKRQLSPS AA+AEERR+HRDDRFGA +KGFDPR ERLRALDLISQFHA
Subjt:  VGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA

A0A7N2MFF3 Uncharacterized protein1.5e-4562.7Show/hide
Query:  MEAMAEGA---PPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRP-SINENSLSSATSAAFNDDAD
        ME MAE A   P  L +LVL+LEQA+ MAKQLP+T++PTHLLQIY SLHQA  +LS FLS+TH  Q  P  LP  LP P + +ENS+SS T  A  D   
Subjt:  MEAMAEGA---PPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRP-SINENSLSSATSAAFNDDAD

Query:  QPMQVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFH
         PMQ+ DD+  D E NSKG IE VEEKM+DCFIKNKR KR LSPSAA +AEERR++ DD FG + KGFDP A RLRALDL+ QFH
Subjt:  QPMQVGDDEDADAEHNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G01840.1 unknown protein4.4e-1842.29Show/hide
Query:  DLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQVGDDEDAD---AE
        +L+ SLEQA+ MA+Q+ +T     LLQI +SL  A   LS FL+      S+P +           E S SS           +PMQ+G++E  +   AE
Subjt:  DLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQVGDDEDAD---AE

Query:  HNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAL---AEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA
              IE VEEKM++CFI+NKR+KR LSPS+A +   A E R  RD  F +     DP A +LRALDLI QFHA
Subjt:  HNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAAL---AEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGCCATGGCAGAAGGAGCACCACCTTCATTGCCCGACCTCGTACTCTCGCTAGAGCAAGCATCATTCATGGCCAAGCAGCTTCCTTCTACCTCTAACCCAACCCA
TCTCCTTCAAATCTACAATTCTCTCCACCAAGCCAGCCTCAACCTCTCCCTTTTCCTCTCTAGAACTCACTTCCCCCAATCCCTTCCTCTTTCTCTTCCTCTTCCTCTTC
CTCGCCCTTCCATCAACGAAAATTCCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACGACGCCGACCAGCCGATGCAGGTCGGCGACGACGAAGATGCCGACGCCGAG
CACAATTCCAAGGGCACGATTGAAATGGTGGAGGAGAAGATGAAGGATTGCTTTATTAAGAACAAGCGGGTCAAGCGTCAACTATCGCCGTCCGCGGCGGCTTTGGCGGA
GGAAAGACGAGTGCACCGTGATGATCGGTTTGGTGCGGCGGCGAAGGGTTTCGATCCTCGTGCTGAGAGATTGCGGGCCTTGGACCTTATTTCCCAGTTTCATGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGCCATGGCAGAAGGAGCACCACCTTCATTGCCCGACCTCGTACTCTCGCTAGAGCAAGCATCATTCATGGCCAAGCAGCTTCCTTCTACCTCTAACCCAACCCA
TCTCCTTCAAATCTACAATTCTCTCCACCAAGCCAGCCTCAACCTCTCCCTTTTCCTCTCTAGAACTCACTTCCCCCAATCCCTTCCTCTTTCTCTTCCTCTTCCTCTTC
CTCGCCCTTCCATCAACGAAAATTCCCTCTCCTCTGCAACCAGCGCCGCCTTCAACGACGACGCCGACCAGCCGATGCAGGTCGGCGACGACGAAGATGCCGACGCCGAG
CACAATTCCAAGGGCACGATTGAAATGGTGGAGGAGAAGATGAAGGATTGCTTTATTAAGAACAAGCGGGTCAAGCGTCAACTATCGCCGTCCGCGGCGGCTTTGGCGGA
GGAAAGACGAGTGCACCGTGATGATCGGTTTGGTGCGGCGGCGAAGGGTTTCGATCCTCGTGCTGAGAGATTGCGGGCCTTGGACCTTATTTCCCAGTTTCATGCGTGA
Protein sequenceShow/hide protein sequence
MEAMAEGAPPSLPDLVLSLEQASFMAKQLPSTSNPTHLLQIYNSLHQASLNLSLFLSRTHFPQSLPLSLPLPLPRPSINENSLSSATSAAFNDDADQPMQVGDDEDADAE
HNSKGTIEMVEEKMKDCFIKNKRVKRQLSPSAAALAEERRVHRDDRFGAAAKGFDPRAERLRALDLISQFHA