; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016216 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016216
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUbiquitin-related modifier 1 homolog
Genome locationchr12:34831836..34837448
RNA-Seq ExpressionLag0016216
SyntenyLag0016216
Gene Ontology termsGO:0002098 - tRNA wobble uridine modification (biological process)
GO:0032447 - protein urmylation (biological process)
GO:0034227 - tRNA thio-modification (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005829 - cytosol (cellular component)
GO:0031386 - protein tag (molecular function)
InterPro domainsIPR012675 - Beta-grasp domain superfamily
IPR015221 - Ubiquitin-related modifier 1
IPR016155 - Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040023.1 ubiquitin-related modifier 1-like protein 2 [Cucumis melo var. makuwa]4.8e-4792.93Show/hide
Query:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        + L FKCSGGLELLC+SVKIHNVSIDPENG GKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

KAG6593693.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4594.85Show/hide
Query:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELLCDSVKIHNVSI+PENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

KAG7026033.1 Ubiquitin-related modifier 1-like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-4896.97Show/hide
Query:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        V+L FKCSGGLELLCDSVKIHNVSI+PENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

XP_022145475.1 ubiquitin-related modifier 1 homolog 2 isoform X1 [Momordica charantia]1.3e-4793.94Show/hide
Query:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        +VL FKCSGGLELLC+SVKIHNVSIDPENGAGKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Subjt:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

XP_038876424.1 ubiquitin-related modifier 1 homolog 2 isoform X2 [Benincasa hispida]5.1e-4995.96Show/hide
Query:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        V+LTFKCSGGLELLCDSVKIHNVSIDPENG GKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

TrEMBL top hitse value%identityAlignment
A0A0A0KCT7 Ubiquitin-related modifier 1 homolog1.4e-4792.93Show/hide
Query:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        ++L FKCSGGLELLC+SVKIHNVSIDPENG GK +MKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

A0A5D3DLM7 Ubiquitin-related modifier 1 homolog2.3e-4792.93Show/hide
Query:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        + L FKCSGGLELLC+SVKIHNVSIDPENG GKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

A0A6J1CUK8 Ubiquitin-related modifier 1 homolog6.1e-4893.94Show/hide
Query:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        +VL FKCSGGLELLC+SVKIHNVSIDPENGAGKL+MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT LEEKDVVVFISTLHGG
Subjt:  VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

A0A6J1HIP6 Ubiquitin-related modifier 1 homolog2.8e-4592.78Show/hide
Query:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELLCDSVKIHN+SI+PENGAGKLVMKDLLSWVRSNLIKERPEMFMKG+TVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

A0A6J1KGQ8 Ubiquitin-related modifier 1 homolog1.7e-4593.81Show/hide
Query:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELLCDSVKIHNVSI+PENG GKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

SwissProt top hitse value%identityAlignment
A0MDQ1 Ubiquitin-related modifier 1 homolog 12.9e-3978.79Show/hide
Query:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELLCDS KIH V++D  NGA      MK LLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

B3H7G2 Ubiquitin-related modifier 1 homolog 29.1e-4182.29Show/hide
Query:  TFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        T +  GGLELLCDSVKIH V+I+  N +  L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Subjt:  TFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

B6SXH2 Ubiquitin-related modifier 1 homolog1.8e-3369.7Show/hide
Query:  LTFKCSGGLELLCD-SVKIHNVSI-DPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELL + S K+H V +  P++G GK+ MK LLSWV+ NLIKERPEMF+K D+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCD-SVKIHNVSI-DPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Q0D6M1 Ubiquitin-related modifier 1 homolog4.0e-3672.45Show/hide
Query:  LTFKCSGGLELLCD-SVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELL + S K+H V + P +G GK+VMK LL+WV+SNLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCD-SVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Q7GBC8 Ubiquitin-related modifier 1 homolog4.0e-3672.45Show/hide
Query:  LTFKCSGGLELLCD-SVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELL + S K+H V + P +G GK+VMK LL+WV+SNLIKERPEMF+KGD+VRPGVLVL+NDCDWEL G LD  LEEKDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCD-SVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

Arabidopsis top hitse value%identityAlignment
AT2G45695.1 Ubiquitin related modifier 12.1e-4078.79Show/hide
Query:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        LT +  GGLELLCDS KIH V++D  NGA      MK LLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDT +E+KDVVVFISTLHGG
Subjt:  LTFKCSGGLELLCDSVKIHNVSIDPENGAGK--LVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG

AT3G61113.1 Ubiquitin related modifier 16.5e-4282.29Show/hide
Query:  TFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG
        T +  GGLELLCDSVKIH V+I+  N +  L MKDLLSWVR+NLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLE+KDV+VFISTLHGG
Subjt:  TFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGCAGTGAGAAGAGTGCAACTAAGAATTTTCCAGCGATCACAAGACGAAGGAGACTGCTACGTTTTGTTCGTTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCTA
CAACAGAGCCGCACGTCCGTCCGATCCCTCGCCGCCGTTCTTCTCTCTTTGTCTCTCTTGCTCACCAAACGACAGCCAACCCCGTTTTTTGCCGATCGCCGATCGCCGGC
ACGCCTCCACCGCCACTTTTCTTTCTCCTCTTTTTATCTCACTATTTGCTGCAACCTCACGTCGCCACGCCAACCCCATCTTTTGCCGCAGCCCTCCATCAATCGAACAC
GTAGTATTAACCTTTAAATGCAGTGGGGGATTGGAGTTACTATGTGACTCTGTAAAGATCCATAATGTCAGCATCGATCCTGAAAATGGAGCGGGAAAGTTAGTTATGAA
AGATTTGCTCTCTTGGGTCCGCTCTAATTTGATCAAGGAGAGGCCAGAAATGTTTATGAAAGGCGACACCGTTAGACCTGGTGTTCTGGTTCTTGTAAATGATTGTGATT
GGGAGCTCAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGATGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTGCAGTGAGAAGAGTGCAACTAAGAATTTTCCAGCGATCACAAGACGAAGGAGACTGCTACGTTTTGTTCGTTGGAGCGTCGTTGGCGAAGAACGGTCAAGTCTA
CAACAGAGCCGCACGTCCGTCCGATCCCTCGCCGCCGTTCTTCTCTCTTTGTCTCTCTTGCTCACCAAACGACAGCCAACCCCGTTTTTTGCCGATCGCCGATCGCCGGC
ACGCCTCCACCGCCACTTTTCTTTCTCCTCTTTTTATCTCACTATTTGCTGCAACCTCACGTCGCCACGCCAACCCCATCTTTTGCCGCAGCCCTCCATCAATCGAACAC
GTAGTATTAACCTTTAAATGCAGTGGGGGATTGGAGTTACTATGTGACTCTGTAAAGATCCATAATGTCAGCATCGATCCTGAAAATGGAGCGGGAAAGTTAGTTATGAA
AGATTTGCTCTCTTGGGTCCGCTCTAATTTGATCAAGGAGAGGCCAGAAATGTTTATGAAAGGCGACACCGTTAGACCTGGTGTTCTGGTTCTTGTAAATGATTGTGATT
GGGAGCTCAGTGGGCAGCTTGACACAACATTGGAAGAGAAAGATGTGGTAGTGTTCATATCCACCTTGCATGGAGGCTAA
Protein sequenceShow/hide protein sequence
MSAVRRVQLRIFQRSQDEGDCYVLFVGASLAKNGQVYNRAARPSDPSPPFFSLCLSCSPNDSQPRFLPIADRRHASTATFLSPLFISLFAATSRRHANPIFCRSPPSIEH
VVLTFKCSGGLELLCDSVKIHNVSIDPENGAGKLVMKDLLSWVRSNLIKERPEMFMKGDTVRPGVLVLVNDCDWELSGQLDTTLEEKDVVVFISTLHGG