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Lag0016256 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016256
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Description40s ribosomal protein SA
Genome locationchr12:35376238..35378979
RNA-Seq ExpressionLag0016256
SyntenyLag0016256
Gene Ontology termsGO:0000028 - ribosomal small subunit assembly (biological process)
GO:0002181 - cytoplasmic translation (biological process)
GO:0016310 - phosphorylation (biological process)
GO:0016020 - membrane (cellular component)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0000166 - nucleotide binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016301 - kinase activity (molecular function)
InterPro domainsIPR005707 - Ribosomal protein S2, eukaryotic/archaeal
IPR018130 - Ribosomal protein S2, conserved site
IPR023591 - Ribosomal protein S2, flavodoxin-like domain superfamily
IPR032675 - Leucine-rich repeat domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065628.1 receptor-like protein kinase [Cucumis melo var. makuwa]6.7e-1465.22Show/hide
Query:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        SNNGL+GQL  EL SL  L++ DISH  L GSL VL E SS L+E NIS+NFF  P  QTLMKLL+SRP
Subjt:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

XP_022152665.1 receptor-like protein kinase [Momordica charantia]6.7e-1462.67Show/hide
Query:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSS
        NL      SNNGLTGQ+  EL SL  L++ DISH  L GSLRVLGE  SSLVE NIS+NFF  P  QTLMK L+S
Subjt:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSS

XP_023523603.1 receptor-like protein kinase [Cucurbita pepo subsp. pepo]1.1e-1362.34Show/hide
Query:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        NL      SNNGLTGQL  EL SL  L + DISH  L GSL VLGE SSSL+E NIS+N F  P  QTLMKLL+S P
Subjt:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

XP_038895809.1 LOW QUALITY PROTEIN: receptor-like protein kinase [Benincasa hispida]6.0e-1558.44Show/hide
Query:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        N+      S+NGLTGQ+  EL++L M+E+ D+SH  L GS+RVLGE SS LVEFNIS+NFF  P  Q+LMK L+SRP
Subjt:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

XP_038902674.1 receptor-like protein kinase [Benincasa hispida]2.7e-1563.64Show/hide
Query:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        NL      SNNGLTGQL  EL SL ML++ DISH  L GSL VLGE SS+L+E NIS+NFF  P  QTLMKLL+S P
Subjt:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

TrEMBL top hitse value%identityAlignment
A0A0A0LEL6 Protein kinase domain-containing protein2.7e-1357.14Show/hide
Query:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        N+     FS+NGLTGQ+  EL++L M+E  DISH  L GS+RVLGE SS LVE NIS NFF      TLMK L+S P
Subjt:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

A0A1S3CM02 receptor-like protein kinase1.6e-1363.77Show/hide
Query:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        SNNGL+ QL  EL SL  L++ DISH  L GSL VL E SS L+E NIS+NFF  P  QTLMKLL+SRP
Subjt:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

A0A5D3C5S7 Receptor-like protein kinase3.2e-1465.22Show/hide
Query:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        SNNGL+GQL  EL SL  L++ DISH  L GSL VL E SS L+E NIS+NFF  P  QTLMKLL+SRP
Subjt:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

A0A6J1DEK7 receptor-like protein kinase3.2e-1462.67Show/hide
Query:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSS
        NL      SNNGLTGQ+  EL SL  L++ DISH  L GSLRVLGE  SSLVE NIS+NFF  P  QTLMK L+S
Subjt:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSS

A0A6J1K878 receptor-like protein kinase7.2e-1462.34Show/hide
Query:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        NL      SNNGLTGQL  EL SL  L + DISH  L GSL VLGE SSSL+E NIS+N F  P  QTLMKLL+S P
Subjt:  NLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

SwissProt top hitse value%identityAlignment
A5BUU4 40S ribosomal protein SA3.8e-1291.89Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        SQKE  IQMMLAAE HLGTKNCNFQMERYVFKRRNDG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

O22518 40S ribosomal protein SA1.1e-1186.49Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        SQKEA IQMMLAA+ HLGTKNC+FQMERY+FKRRNDG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

O65751 40S ribosomal protein SA6.5e-1286.49Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        +QKEA IQMMLAA+ HLGTKNCNFQMERY+FKRRNDG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

Q08682 40S ribosomal protein Sa-13.2e-1183.78Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        SQKEA ++MM AAE HLGTKNCN+QMERYVFKRRNDG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

Q9ZSR8 40S ribosomal protein SA2.5e-1186.49Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        SQKEA I+MM AAE HLGTKNCN+QMERYVFKRRNDG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

Arabidopsis top hitse value%identityAlignment
AT1G72370.1 40s ribosomal protein SA2.3e-1283.78Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        SQKEA ++MM AAE HLGTKNCN+QMERYVFKRRNDG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

AT1G72370.2 40s ribosomal protein SA2.3e-1283.78Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        SQKEA ++MM AAE HLGTKNCN+QMERYVFKRRNDG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

AT1G73080.1 PEP1 receptor 14.6e-0540.58Show/hide
Query:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP
        S NGLTG++  +L  L  L + +IS+  L GSL VL +  +SL+  ++SNN F  P    L   L S P
Subjt:  SNNGLTGQLSPELESLTMLEKFDISHTKLNGSLRVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRP

AT3G04770.1 40s ribosomal protein SA B6.6e-1281.08Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        S+KEA IQMML+A+ HLGTKNCN+QMERYVFKRR+DG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG

AT3G04770.2 40s ribosomal protein SA B6.6e-1281.08Show/hide
Query:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG
        S+KEA IQMML+A+ HLGTKNCN+QMERYVFKRR+DG
Subjt:  SQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTTGCCGTCGCTTCCTCCCCTCACCGAACGCCGACACTCTCCTCCTTCCGACTACCGCCGGCGAGCACAGTGGCCACGAAAGCAGCAGTTCTGATGATTCGCCA
CAAGTCGTGCAAGGTTGCAAGTAATGCTTATTGGAGCTCTAGTGAGAGGTTTTCTCCTGTAAACCAAGGTTTACGAGCAGGTGGAATTTTGTTTGTGTTTGATTTTGACT
TACTCGATTACATTCTAGGGATCATCTACACTCTCTATGCCATCGTCTTCGTCGAGTTTATGCCACTCGTGATGTTGCTGAGGTTACCTTCGGATGAAATAAATAACATC
AACTCACAGAAGGAGGCTGGCATTCAGATGATGTTGGCCGCTGAGGCTCATCTTGGCACCAAAAACTGCAATTTTCAAATGGAACGATACGTTTTCAAGCGCCGAAATGA
TGGGCAAGGAATATCTACTCTTAAGTTTGCTGCTCTTTTGCATTCTGTGCTTGGGGGGACTATGAGCAAGTATTGTGTGCTTTGGACTGTAGCTCTCAATCTTGTAGTAC
TAAACCAATTCAGTAACAATGGGTTAACTGGCCAACTATCTCCTGAGTTAGAGAGTCTGACCATGCTAGAGAAGTTTGATATATCTCACACTAAGTTGAATGGAAGTTTA
AGAGTTCTTGGAGAATTTAGTTCATCGTTAGTTGAGTTTAACATTTCAAATAATTTCTTCAAAGCTCCTGCTGCCCAGACATTAATGAAGTTACTGAGTTCTCGTCCTCA
TCGTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTTGCCGTCGCTTCCTCCCCTCACCGAACGCCGACACTCTCCTCCTTCCGACTACCGCCGGCGAGCACAGTGGCCACGAAAGCAGCAGTTCTGATGATTCGCCA
CAAGTCGTGCAAGGTTGCAAGTAATGCTTATTGGAGCTCTAGTGAGAGGTTTTCTCCTGTAAACCAAGGTTTACGAGCAGGTGGAATTTTGTTTGTGTTTGATTTTGACT
TACTCGATTACATTCTAGGGATCATCTACACTCTCTATGCCATCGTCTTCGTCGAGTTTATGCCACTCGTGATGTTGCTGAGGTTACCTTCGGATGAAATAAATAACATC
AACTCACAGAAGGAGGCTGGCATTCAGATGATGTTGGCCGCTGAGGCTCATCTTGGCACCAAAAACTGCAATTTTCAAATGGAACGATACGTTTTCAAGCGCCGAAATGA
TGGGCAAGGAATATCTACTCTTAAGTTTGCTGCTCTTTTGCATTCTGTGCTTGGGGGGACTATGAGCAAGTATTGTGTGCTTTGGACTGTAGCTCTCAATCTTGTAGTAC
TAAACCAATTCAGTAACAATGGGTTAACTGGCCAACTATCTCCTGAGTTAGAGAGTCTGACCATGCTAGAGAAGTTTGATATATCTCACACTAAGTTGAATGGAAGTTTA
AGAGTTCTTGGAGAATTTAGTTCATCGTTAGTTGAGTTTAACATTTCAAATAATTTCTTCAAAGCTCCTGCTGCCCAGACATTAATGAAGTTACTGAGTTCTCGTCCTCA
TCGTTCTTAG
Protein sequenceShow/hide protein sequence
MGLAVASSPHRTPTLSSFRLPPASTVATKAAVLMIRHKSCKVASNAYWSSSERFSPVNQGLRAGGILFVFDFDLLDYILGIIYTLYAIVFVEFMPLVMLLRLPSDEINNI
NSQKEAGIQMMLAAEAHLGTKNCNFQMERYVFKRRNDGQGISTLKFAALLHSVLGGTMSKYCVLWTVALNLVVLNQFSNNGLTGQLSPELESLTMLEKFDISHTKLNGSL
RVLGEFSSSLVEFNISNNFFKAPAAQTLMKLLSSRPHRS