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Lag0016261 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016261
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr12:35435510..35436551
RNA-Seq ExpressionLag0016261
SyntenyLag0016261
Gene Ontology termsGO:0006310 - DNA recombination (biological process)
GO:0032196 - transposition (biological process)
GO:0003676 - nucleic acid binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_021802017.1 uncharacterized protein LOC110746108, partial [Prunus avium]2.4e-3550.77Show/hide
Query:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG
        ESY+V++S+T+ Y+A++ A  +I GN ++QY RLWDYAE+L+ +N+GST+KI CD V       F+++Y+C  AC +GFL GCRP I +D CHLKGP  G
Subjt:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG

Query:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
         ++  VG+DGN+ ++PIA+ V E + KDSW
Subjt:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

XP_021806105.1 uncharacterized protein LOC110750138 [Prunus avium]5.3e-3551.54Show/hide
Query:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG
        ESY+V++S+T+ Y+A++ A  +I GN ++QY RLWDYAE+L+ +N+GST+KI CD V       F+++Y+C  AC KGFL GCRP I +D CHLKGP  G
Subjt:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG

Query:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
         ++  VG++GN+ ++PIA+VV E   KDSW
Subjt:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

XP_021828203.1 uncharacterized protein LOC110768680 [Prunus avium]8.5e-3348.46Show/hide
Query:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG
        ESY+V++S+T+ Y+ ++ A  +I GN ++QY RLWDYAE+L+ +N+GS +KI CD V       F+++Y+C  AC KGFL GCRP I +D C LKGP  G
Subjt:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG

Query:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
         ++  VG+DGN+ ++PIA+ V + + KDSW
Subjt:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

XP_034204500.1 uncharacterized protein LOC117618861 [Prunus dulcis]2.6e-3439.47Show/hide
Query:  EGDEVDRAPKFRVETDID-HIRFFVGMKFSSSKILKDAIKDYAL---------------KESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEE
        + ++ DR P F V++  D    F +GM+F++   LK+AI++YA+                E Y++ +S+ + Y+A+  + + I G+ +EQY RLWDYAEE
Subjt:  EGDEVDRAPKFRVETDID-HIRFFVGMKFSSSKILKDAIKDYAL---------------KESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEE

Query:  LRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
        L+ +N+GST+ I     ++ + P F ++Y+C   C +GFL+GCRP I +D CHLKGP  G ++  VG+DGN+ +YP+A+ VVE ++K SW
Subjt:  LRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

XP_034229470.1 uncharacterized protein LOC117638454 [Prunus dulcis]5.9e-3438.17Show/hide
Query:  FNHVSKDVERGEESDDDDERPTSPNLELDVQVEIEGEVESVYGSEDVLNNPYFSEGDEVDRAPKFRVETDIDHIRFFVGMKFSSSKILKDAIK------D
        F  V   V  G E   +D     P  E   +V  +GE  S + +E        SEGDE D                  G    +SK+LK+A+       D
Subjt:  FNHVSKDVERGEESDDDDERPTSPNLELDVQVEIEGEVESVYGSEDVLNNPYFSEGDEVDRAPKFRVETDIDHIRFFVGMKFSSSKILKDAIK------D

Query:  YALK-------ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRL
        + LK       ESY+V++S+T+ Y+A+R A  +I GN ++QY R WDY E+L+ +N+GST+KI CD V       F+++Y+   AC KGFL+ CRP I +
Subjt:  YALK-------ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRL

Query:  DECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
        D CHLKGP  G ++  VG+DGN+ ++PIA+VV E + KD W
Subjt:  DECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

TrEMBL top hitse value%identityAlignment
A0A5E4G990 PREDICTED: transposon2.0e-3230.93Show/hide
Query:  NLELDVQVEIEGEVESVYGSEDVLNNPYFSEGDEVDRAPKFRVETDIDHIRFFVGMKFSSSKILKDAIKDYALKESY-----------------------
        N E ++QVE     E  Y S+++ +     E     +  +F ++TD+D+ +F VGMKF S K+LK AI+ Y    SY                       
Subjt:  NLELDVQVEIEGEVESVYGSEDVLNNPYFSEGDEVDRAPKFRVETDIDHIRFFVGMKFSSSKILKDAIKDYALKESY-----------------------

Query:  ----------------------------------------------------------------NVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAE
                                                                          ++S  + YKA+RKA   I G   +QY++LW+Y E
Subjt:  ----------------------------------------------------------------NVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAE

Query:  ELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
        E+R +N GS++ +  D       P F+++Y+C  AC KGF++GCRP I +D CHLKG  QG L+V VGID ND+IYPIA+ V E ++KDSW
Subjt:  ELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

A0A6P5RGQ6 uncharacterized protein LOC1107461081.2e-3550.77Show/hide
Query:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG
        ESY+V++S+T+ Y+A++ A  +I GN ++QY RLWDYAE+L+ +N+GST+KI CD V       F+++Y+C  AC +GFL GCRP I +D CHLKGP  G
Subjt:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG

Query:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
         ++  VG+DGN+ ++PIA+ V E + KDSW
Subjt:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

A0A6P5RMH4 uncharacterized protein LOC1107501382.6e-3551.54Show/hide
Query:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG
        ESY+V++S+T+ Y+A++ A  +I GN ++QY RLWDYAE+L+ +N+GST+KI CD V       F+++Y+C  AC KGFL GCRP I +D CHLKGP  G
Subjt:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG

Query:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
         ++  VG++GN+ ++PIA+VV E   KDSW
Subjt:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

A0A6P5TKU8 uncharacterized protein LOC1107686804.1e-3348.46Show/hide
Query:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG
        ESY+V++S+T+ Y+ ++ A  +I GN ++QY RLWDYAE+L+ +N+GS +KI CD V       F+++Y+C  AC KGFL GCRP I +D C LKGP  G
Subjt:  ESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQG

Query:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
         ++  VG+DGN+ ++PIA+ V + + KDSW
Subjt:  HLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

M5X0G1 ZnF_PMZ domain-containing protein (Fragment)2.7e-3230.93Show/hide
Query:  NLELDVQVEIEGEVESVYGSEDVLNNPYFSEGDEVDRAPKFRVETDIDHIRFFVGMKFSSSKILKDAIKDYALKESY-----------------------
        N E D+QVE     E  Y S+++ +     E     R  +  ++TD+D+ +F VGMKF S K+LK AI+ Y    SY                       
Subjt:  NLELDVQVEIEGEVESVYGSEDVLNNPYFSEGDEVDRAPKFRVETDIDHIRFFVGMKFSSSKILKDAIKDYALKESY-----------------------

Query:  ----------------------------------------------------------------NVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAE
                                                                          ++S  + YKA+RKA   I G   +QY++LW+Y E
Subjt:  ----------------------------------------------------------------NVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAE

Query:  ELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW
        E+R +N GS++ +  D       P F+++Y+C  AC KGF++GCRP I +D CHLKG  QG L+V VGID ND++YPIA+ V E ++KDSW
Subjt:  ELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFIRLDECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTAATTCCGAACGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAAAATTTACTCGATTGATTGGTATCATACCTTTAA
TCATGTTTCTAAGGACGTGGAAAGAGGTGAAGAGTCAGACGATGATGATGAGAGACCAACTTCACCCAATTTAGAATTAGATGTGCAAGTTGAGATTGAAGGAGAAGTTG
AGTCAGTTTATGGGTCAGAAGATGTCCTAAATAATCCATATTTTTCTGAAGGAGATGAGGTGGATAGAGCACCAAAGTTTAGGGTTGAGACTGATATAGATCATATTCGA
TTTTTTGTTGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAAAGGACTATGCACTTAAGGAGTCTTACAATGTTCAAATTTCGAGGACCGAAGCTTATAA
GGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTAGAACAATACAAGCGATTATGGGACTATGCTGAAGAGTTGAGACTATCGAATGAAGGTTCTACAATAA
AAATAACTTGTGATAGGGTAGTTGAGGATTCCCACCCCACATTTAGACAGATGTATATATGCTTTAGAGCATGTAACAAGGGGTTTCTTAGTGGATGTCGCCCATTCATA
AGACTAGATGAATGTCACCTCAAAGGGCCATGCCAAGGACATCTGATGGTTGTAGTTGGAATAGATGGTAATGATGACATATACCCTATTGCATGGGTTGTGGTGGAGGC
AAAGACTAAAGATAGTTGGACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTTAATTCCGAACGAACATAATTCAAATGAAGTAGCCTTCAACATTGAACAACTTAATGGTGAAGCGAAAATTTACTCGATTGATTGGTATCATACCTTTAA
TCATGTTTCTAAGGACGTGGAAAGAGGTGAAGAGTCAGACGATGATGATGAGAGACCAACTTCACCCAATTTAGAATTAGATGTGCAAGTTGAGATTGAAGGAGAAGTTG
AGTCAGTTTATGGGTCAGAAGATGTCCTAAATAATCCATATTTTTCTGAAGGAGATGAGGTGGATAGAGCACCAAAGTTTAGGGTTGAGACTGATATAGATCATATTCGA
TTTTTTGTTGGTATGAAATTTAGCAGTTCTAAAATCTTAAAAGATGCTATAAAGGACTATGCACTTAAGGAGTCTTACAATGTTCAAATTTCGAGGACCGAAGCTTATAA
GGCTAGAAGGAAGGCCTTGATAAAGATTAATGGGAATCTCTTAGAACAATACAAGCGATTATGGGACTATGCTGAAGAGTTGAGACTATCGAATGAAGGTTCTACAATAA
AAATAACTTGTGATAGGGTAGTTGAGGATTCCCACCCCACATTTAGACAGATGTATATATGCTTTAGAGCATGTAACAAGGGGTTTCTTAGTGGATGTCGCCCATTCATA
AGACTAGATGAATGTCACCTCAAAGGGCCATGCCAAGGACATCTGATGGTTGTAGTTGGAATAGATGGTAATGATGACATATACCCTATTGCATGGGTTGTGGTGGAGGC
AAAGACTAAAGATAGTTGGACATGA
Protein sequenceShow/hide protein sequence
MGSLIPNEHNSNEVAFNIEQLNGEAKIYSIDWYHTFNHVSKDVERGEESDDDDERPTSPNLELDVQVEIEGEVESVYGSEDVLNNPYFSEGDEVDRAPKFRVETDIDHIR
FFVGMKFSSSKILKDAIKDYALKESYNVQISRTEAYKARRKALIKINGNLLEQYKRLWDYAEELRLSNEGSTIKITCDRVVEDSHPTFRQMYICFRACNKGFLSGCRPFI
RLDECHLKGPCQGHLMVVVGIDGNDDIYPIAWVVVEAKTKDSWT