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Lag0016266 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016266
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:35493154..35493648
RNA-Seq ExpressionLag0016266
SyntenyLag0016266
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040002.1 hypothetical protein E6C27_scaffold122G002850 [Cucumis melo var. makuwa]3.8e-0741.94Show/hide
Query:  SEHQNILPCEIVQLVE-----KSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSYEDRVHESCVKDDREEGFEE---EDLE
        S+H+N     I++L+E     KSSR S+FL  N I+  L  + + R SS+E+  E    ++   +SD +  L+ E+ +   CV+D  +EG EE   +DLE
Subjt:  SEHQNILPCEIVQLVE-----KSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSYEDRVHESCVKDDREEGFEE---EDLE

Query:  EKVQEFIDMMNNLWREEKIHDLLL
        +K QEFIDMMN  WREE IHD  L
Subjt:  EKVQEFIDMMNNLWREEKIHDLLL
KAE8646698.1 hypothetical protein Csa_005140 [Cucumis sativus]7.9e-1342.57Show/hide
Query:  MRKLPFSAFLLLLSLNFFFFFFYCFSSRSACSEHQNILPCEIVQLVEKSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSY
        M+KL      +++ L+FF FF   F+ R+  ++   I+      LV KSSR S+FL  N II  L  + + + SS+EE  E    +     SDD +L SY
Subjt:  MRKLPFSAFLLLLSLNFFFFFFYCFSSRSACSEHQNILPCEIVQLVEKSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSY

Query:  E-DRVHESCVKDDREEGFEEEDLEEKVQEFIDMMNNLWREEKIHDLLL
        E   V +SC +D  EEG  ++DLE+K QEFIDMMN  WREE IHD  L
Subjt:  E-DRVHESCVKDDREEGFEEEDLEEKVQEFIDMMNNLWREEKIHDLLL
TrEMBL top hitse value%identityAlignment
A0A0A0K9S4 Uncharacterized protein8.0e-1148.72Show/hide
Query:  HQNIL--PCEIVQLVEKSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSYE-DRVHESCVKDDREEGFEEEDLEEKVQEFI
        H+N++    EIV LV KSSR S+FL  N II  L  + + + SS+EE  E    +     SDD +L SYE   V +SC +D  EEG  ++DLE+K QEFI
Subjt:  HQNIL--PCEIVQLVEKSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSYE-DRVHESCVKDDREEGFEEEDLEEKVQEFI

Query:  DMMNNLWREEKIHDLLL
        DMMN  WREE IHD  L
Subjt:  DMMNNLWREEKIHDLLL
A0A5A7T9A6 Uncharacterized protein1.8e-0741.94Show/hide
Query:  SEHQNILPCEIVQLVE-----KSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSYEDRVHESCVKDDREEGFEE---EDLE
        S+H+N     I++L+E     KSSR S+FL  N I+  L  + + R SS+E+  E    ++   +SD +  L+ E+ +   CV+D  +EG EE   +DLE
Subjt:  SEHQNILPCEIVQLVE-----KSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSYEDRVHESCVKDDREEGFEE---EDLE

Query:  EKVQEFIDMMNNLWREEKIHDLLL
        +K QEFIDMMN  WREE IHD  L
Subjt:  EKVQEFIDMMNNLWREEKIHDLLL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGAAGCTTCCCTTTTCTGCTTTCTTGCTTCTTCTTTCACTGAATTTCTTCTTCTTCTTCTTCTACTGTTTCTCGTCTCGCTCGGCGTGTTCCGAGCATCAAAACAT
CCTCCCATGTGAAATCGTTCAGCTGGTAGAAAAATCGAGTCGTGTATCGGTGTTTCTCGTGTTTAATGCCATCATTTTCAGCCTCTTGTCCCAGAATGTTAATCGAACAT
CGAGCGAAGAAGAAGGGATGGAATTGGAGTTAGTAGAATACTATGATGATTATAGCGACGACGACAAACTACTTAGTTACGAAGATCGCGTTCACGAGAGTTGTGTTAAA
GATGATCGAGAAGAAGGGTTTGAAGAAGAGGATTTGGAGGAGAAGGTTCAAGAATTCATAGACATGATGAACAATTTATGGAGGGAAGAAAAGATTCATGATCTCTTACT
TCATCATCCAAGTTACAACCTGAAAAAAGCACCATTAAACATTTGGTCTTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGAAGCTTCCCTTTTCTGCTTTCTTGCTTCTTCTTTCACTGAATTTCTTCTTCTTCTTCTTCTACTGTTTCTCGTCTCGCTCGGCGTGTTCCGAGCATCAAAACAT
CCTCCCATGTGAAATCGTTCAGCTGGTAGAAAAATCGAGTCGTGTATCGGTGTTTCTCGTGTTTAATGCCATCATTTTCAGCCTCTTGTCCCAGAATGTTAATCGAACAT
CGAGCGAAGAAGAAGGGATGGAATTGGAGTTAGTAGAATACTATGATGATTATAGCGACGACGACAAACTACTTAGTTACGAAGATCGCGTTCACGAGAGTTGTGTTAAA
GATGATCGAGAAGAAGGGTTTGAAGAAGAGGATTTGGAGGAGAAGGTTCAAGAATTCATAGACATGATGAACAATTTATGGAGGGAAGAAAAGATTCATGATCTCTTACT
TCATCATCCAAGTTACAACCTGAAAAAAGCACCATTAAACATTTGGTCTTCCTAA
Protein sequenceShow/hide protein sequence
MRKLPFSAFLLLLSLNFFFFFFYCFSSRSACSEHQNILPCEIVQLVEKSSRVSVFLVFNAIIFSLLSQNVNRTSSEEEGMELELVEYYDDYSDDDKLLSYEDRVHESCVK
DDREEGFEEEDLEEKVQEFIDMMNNLWREEKIHDLLLHHPSYNLKKAPLNIWSS