; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016294 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016294
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:35956216..35957378
RNA-Seq ExpressionLag0016294
SyntenyLag0016294
Gene Ontology termsNA
InterPro domainsIPR025558 - Domain of unknown function DUF4283


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022149484.1 uncharacterized protein LOC111017902 [Momordica charantia]1.2e-2939.26Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D + D W     + +E   + +    P+L    V++C V K+ T++ ++ +A+R VM SVW VH STR E LG NI+V+ F S+SEK R+LS+ PW F+
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG----GW
        K++ VL SPT ++ P  ++F+ CAFW+ I+ +PF  ++  MA+ LG  +G V ++ G    GW
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG----GW

XP_022155933.1 uncharacterized protein LOC111022932 [Momordica charantia]5.2e-2537.42Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D + + W    L++E+   I +    PL+    VQ  AVGK+ T++ ++ +A R VM S+W VH ST IE  G N++V+ F S++EK R+L++ PW+F+
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV
         ++ VL SPT +D P  ++F+  A W+ I+ +PF  +   MA  LG  IG V ++
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV

XP_022156185.1 uncharacterized protein LOC111023135 [Momordica charantia]3.1e-2233.93Show/hide
Query:  DVDGLADQWNKMGL-SEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWN
        D + L   W K  L SEE+   + V  +   + +  +    VGK++  R ++ D L RV++  W V     +E++G N+F+  FC   +  R++ T PW 
Subjt:  DVDGLADQWNKMGL-SEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWN

Query:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGGGWRTNRYGA
        FDKA+ VL  P  S + + ++F+R AFW+H+  +P ++L   MA  LGN IG  VDV    +   +GA
Subjt:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGGGWRTNRYGA

XP_022156711.1 uncharacterized protein LOC111023555 [Momordica charantia]1.6e-2639.49Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D +   W    L +EE   I +    P+L    +Q+CAVGK+  ++ +  +A   VM  VW +H STRIE  G NI+V+ F +++EK R+ S  PW FD
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG
        K++ +LV  T ++ P  ID S CAFWV I+ + F  +T  MA  LG  +G V +V G
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG

XP_022158119.1 uncharacterized protein LOC111024676, partial [Momordica charantia]4.0e-3345.16Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D + + W    L+ EE     V    P+L    +Q+C VGK+ T++ ++  AL  VM  VW +H STRIEA G NI+V+ F ++ EK+R+LS+ PW FD
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV
        K++FVLVSPT +D P  +DF  CAFWV I+ +PF +LT  MA  LG+ +G V +V
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV

TrEMBL top hitse value%identityAlignment
A0A6J1D765 uncharacterized protein LOC1110179025.8e-3039.26Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D + D W     + +E   + +    P+L    V++C V K+ T++ ++ +A+R VM SVW VH STR E LG NI+V+ F S+SEK R+LS+ PW F+
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG----GW
        K++ VL SPT ++ P  ++F+ CAFW+ I+ +PF  ++  MA+ LG  +G V ++ G    GW
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG----GW

A0A6J1DP89 uncharacterized protein LOC1110229322.5e-2537.42Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D + + W    L++E+   I +    PL+    VQ  AVGK+ T++ ++ +A R VM S+W VH ST IE  G N++V+ F S++EK R+L++ PW+F+
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV
         ++ VL SPT +D P  ++F+  A W+ I+ +PF  +   MA  LG  IG V ++
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV

A0A6J1DU55 uncharacterized protein LOC1110231351.5e-2233.93Show/hide
Query:  DVDGLADQWNKMGL-SEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWN
        D + L   W K  L SEE+   + V  +   + +  +    VGK++  R ++ D L RV++  W V     +E++G N+F+  FC   +  R++ T PW 
Subjt:  DVDGLADQWNKMGL-SEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWN

Query:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGGGWRTNRYGA
        FDKA+ VL  P  S + + ++F+R AFW+H+  +P ++L   MA  LGN IG  VDV    +   +GA
Subjt:  FDKAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGGGWRTNRYGA

A0A6J1DVS4 uncharacterized protein LOC1110235557.8e-2739.49Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D +   W    L +EE   I +    P+L    +Q+CAVGK+  ++ +  +A   VM  VW +H STRIE  G NI+V+ F +++EK R+ S  PW FD
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG
        K++ +LV  T ++ P  ID S CAFWV I+ + F  +T  MA  LG  +G V +V G
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGG

A0A6J1DYG3 uncharacterized protein LOC1110246761.9e-3345.16Show/hide
Query:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD
        +D + + W    L+ EE     V    P+L    +Q+C VGK+ T++ ++  AL  VM  VW +H STRIEA G NI+V+ F ++ EK+R+LS+ PW FD
Subjt:  VDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFD

Query:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV
        K++FVLVSPT +D P  +DF  CAFWV I+ +PF +LT  MA  LG+ +G V +V
Subjt:  KAVFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCTGTGAGTGCGAGCGATGTGGATGGTTTGGCTGATCAGTGGAATAAGATGGGCCTATCAGAGGAGGAAGCGACTGTGATACCTGTGCCGGAGAATGTTCCGTT
ACTAGATGATTCGACAGTACAGGTTTGTGCGGTGGGTAAGGTTATAACGAATCGTTTTGTGAATCCAGATGCGTTACGGAGGGTGATGATGTCTGTCTGGAATGTCCACC
GATCGACGAGGATTGAAGCTCTCGGCGACAACATATTCGTAGTCCAGTTTTGCTCAGTGAGTGAGAAGCGCCGAATACTGAGCACGGACCCATGGAATTTCGATAAAGCA
GTGTTTGTACTGGTCTCCCCTACAGGTTCGGATAGTCCAGCACTGATTGATTTTTCCAGGTGTGCTTTCTGGGTCCATATTAATCGAGTTCCTTTCAATTTTCTTACGCC
TGCGATGGCGAGTGCGTTGGGGAATGTTATTGGGCCGGTTGTGGATGTGGGGGGGGGGTGGAGGACAAATCGATATGGTGCCCAATCCAATACGAACGCCTCCCGGATTT
CTGTTACCAATGTGGATGTATGGGGCACTCATATCGTGGGTGTGTGCTTGAGCCCCCACTTGTGGCTGCTGATGATCGTTTCCCTTTTGGGGACTGGTTGTGTGCATTGC
CCCTTCGACGCCCACCACCGAAGGATGAGGGTGGGGAGGGGGAAAGAACCGAGAGTCCATGGGGGTCAAAGTGGGGAGGGTTTGGGTAGAGAGAGAGGGAGAGGGAGAGA
GCGTGGCCGAGGGGGAGTGGGGGAAGGTTTGGTGGGGGAGGGAGTTGGGGTGGGTCAAGTTTTGGAGAATGTTTCGAGTGCAGGCCCTTCTCCTTTAAATGAGAGCCAGG
GGGCGTCGGATCCTGCACCCTCGAATGAAAGGGAGGTGTTGGCTCCTATGGGTGTGACTGTGGTTCGAGATAAGGGGAAGGCTGTGGTGGAGAGCCCACCTCTGGTGGTG
GGGGGGGGAAGGAAACAATATTCAGGGGAAAAAAGGATGGAAGAGATTGGCTCGGGGAGTGTTGAGGGATGTGACAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTCTGTGAGTGCGAGCGATGTGGATGGTTTGGCTGATCAGTGGAATAAGATGGGCCTATCAGAGGAGGAAGCGACTGTGATACCTGTGCCGGAGAATGTTCCGTT
ACTAGATGATTCGACAGTACAGGTTTGTGCGGTGGGTAAGGTTATAACGAATCGTTTTGTGAATCCAGATGCGTTACGGAGGGTGATGATGTCTGTCTGGAATGTCCACC
GATCGACGAGGATTGAAGCTCTCGGCGACAACATATTCGTAGTCCAGTTTTGCTCAGTGAGTGAGAAGCGCCGAATACTGAGCACGGACCCATGGAATTTCGATAAAGCA
GTGTTTGTACTGGTCTCCCCTACAGGTTCGGATAGTCCAGCACTGATTGATTTTTCCAGGTGTGCTTTCTGGGTCCATATTAATCGAGTTCCTTTCAATTTTCTTACGCC
TGCGATGGCGAGTGCGTTGGGGAATGTTATTGGGCCGGTTGTGGATGTGGGGGGGGGGTGGAGGACAAATCGATATGGTGCCCAATCCAATACGAACGCCTCCCGGATTT
CTGTTACCAATGTGGATGTATGGGGCACTCATATCGTGGGTGTGTGCTTGAGCCCCCACTTGTGGCTGCTGATGATCGTTTCCCTTTTGGGGACTGGTTGTGTGCATTGC
CCCTTCGACGCCCACCACCGAAGGATGAGGGTGGGGAGGGGGAAAGAACCGAGAGTCCATGGGGGTCAAAGTGGGGAGGGTTTGGGTAGAGAGAGAGGGAGAGGGAGAGA
GCGTGGCCGAGGGGGAGTGGGGGAAGGTTTGGTGGGGGAGGGAGTTGGGGTGGGTCAAGTTTTGGAGAATGTTTCGAGTGCAGGCCCTTCTCCTTTAAATGAGAGCCAGG
GGGCGTCGGATCCTGCACCCTCGAATGAAAGGGAGGTGTTGGCTCCTATGGGTGTGACTGTGGTTCGAGATAAGGGGAAGGCTGTGGTGGAGAGCCCACCTCTGGTGGTG
GGGGGGGGAAGGAAACAATATTCAGGGGAAAAAAGGATGGAAGAGATTGGCTCGGGGAGTGTTGAGGGATGTGACAAATGA
Protein sequenceShow/hide protein sequence
MASVSASDVDGLADQWNKMGLSEEEATVIPVPENVPLLDDSTVQVCAVGKVITNRFVNPDALRRVMMSVWNVHRSTRIEALGDNIFVVQFCSVSEKRRILSTDPWNFDKA
VFVLVSPTGSDSPALIDFSRCAFWVHINRVPFNFLTPAMASALGNVIGPVVDVGGGWRTNRYGAQSNTNASRISVTNVDVWGTHIVGVCLSPHLWLLMIVSLLGTGCVHC
PFDAHHRRMRVGRGKEPRVHGGQSGEGLGRERGRGRERGRGGVGEGLVGEGVGVGQVLENVSSAGPSPLNESQGASDPAPSNEREVLAPMGVTVVRDKGKAVVESPPLVV
GGGRKQYSGEKRMEEIGSGSVEGCDK