| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040811.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 5.2e-48 | 42.77 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI------------------------------------------------
KVDDP YCKYHRVI H VE+CFVLK+LILKL +E KIELD+DEVAQ+N +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI------------------------------------------------
Query: --------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKTKENLATSYC--------
KGN H++K K K +P + + + F QP+Q + L + F ++F KE L + C
Subjt: --------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKTKENLATSYC--------
Query: ----IDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKL
EEVDNS + +QRTSVFDRIKP TTR SVFQR+S+ EEENQC ST TR SAF+ LS+STSKK +PSTS FDRLK+ +DQ +R+M +L+VK
Subjt: ----IDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKL
Query: FDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
F E N D K+HS VPSRMKRK SV I TEGSL
Subjt: FDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| KAA0050736.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 6.6e-51 | 42.51 | Show/hide |
Query: MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI----------------------------------------------
+EKVDDP YCKYHR+I HPVE+CFVLK+LILKLA+E KI+LD+DEVAQ+N +
Subjt: MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI----------------------------------------------
Query: ----------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKENLA------TSYCI
KGN H++K K K +P +++ +KF QP++ + L + F ++F + E + T+ +
Subjt: ----------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKENLA------TSYCI
Query: DV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV
+V EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA EEENQC MST TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+
Subjt: DV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV
Query: KLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
K F E N D K++S VPSR+KRK S+ I TEGSL
Subjt: KLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| KAA0056121.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-48 | 53.5 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N A I+ + + KD LQ +R RS P++++ + +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
Query: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
+ + N +S +EV+NS + QRTSVFDRIKP TTR SVFQR+S+A EEENQC TR S +RLS+ST KK +PSTS FDRLK+T+DQ
Subjt: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
Query: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
+R+M + + K F E N D K+HS VPSRMKRK V I TEGSL
Subjt: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| KAA0065608.1 retrotransposon gag protein [Cucumis melo var. makuwa] | 2.8e-49 | 54.89 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKE
KVDDP YCKYHRVI H +E+CFVLK+LILKLA + KIELD+DEVAQ+N A + + P L + F + +L + T +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKE
Query: NLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLE
N SY EEVDNS + +QRT VFDRIKP TTR SVFQR+SMA EEE QC ST TR S F+RLS+STSKK +PSTS FDRLK+T+DQ +++M +L+
Subjt: NLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLE
Query: VKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
K F E N D K+HS VPSR KRK SV I TEGSL
Subjt: VKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| KAA0065984.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.2e-47 | 53.91 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KI+LD+DE IKG KD LQP+R RS P++++ + +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
Query: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
+ + +N SY EEVDNS + +QRTSVFDRIKP TTR VFQR+SMA EEENQC ST TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ
Subjt: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
Query: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
+R+M +L+ K F E N D K+HS +PS RK SV I EGSL
Subjt: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TGM1 Retrotransposon gag protein | 2.5e-48 | 42.77 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI------------------------------------------------
KVDDP YCKYHRVI H VE+CFVLK+LILKL +E KIELD+DEVAQ+N +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI------------------------------------------------
Query: --------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKTKENLATSYC--------
KGN H++K K K +P + + + F QP+Q + L + F ++F KE L + C
Subjt: --------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTF-HKKTKENLATSYC--------
Query: ----IDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKL
EEVDNS + +QRTSVFDRIKP TTR SVFQR+S+ EEENQC ST TR SAF+ LS+STSKK +PSTS FDRLK+ +DQ +R+M +L+VK
Subjt: ----IDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKL
Query: FDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
F E N D K+HS VPSRMKRK SV I TEGSL
Subjt: FDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| A0A5A7U974 Retrotransposon gag protein | 3.2e-51 | 42.51 | Show/hide |
Query: MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI----------------------------------------------
+EKVDDP YCKYHR+I HPVE+CFVLK+LILKLA+E KI+LD+DEVAQ+N +
Subjt: MEKVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATI----------------------------------------------
Query: ----------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKENLA------TSYCI
KGN H++K K K +P +++ +KF QP++ + L + F ++F + E + T+ +
Subjt: ----------------------------------KGNNKHQRK----KDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKENLA------TSYCI
Query: DV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV
+V EEVDNS + +QRTSVFDRIKP TTR SVFQR+SMA EEENQC MST TR SAF+RLS+S SKK +PSTS FDRLK+T+DQ +R+M +L+
Subjt: DV-------EEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV
Query: KLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
K F E N D K++S VPSR+KRK S+ I TEGSL
Subjt: KLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| A0A5A7URH1 Ty3-gypsy retrotransposon protein | 1.9e-48 | 53.5 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KIELD+DEVAQ+N A I+ + + KD LQ +R RS P++++ + +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
Query: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
+ + N +S +EV+NS + QRTSVFDRIKP TTR SVFQR+S+A EEENQC TR S +RLS+ST KK +PSTS FDRLK+T+DQ
Subjt: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
Query: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
+R+M + + K F E N D K+HS VPSRMKRK V I TEGSL
Subjt: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| A0A5A7VFA5 Ty3-gypsy retrotransposon protein | 5.6e-48 | 53.91 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
KVDDP YCKYHRVI HPVE+CFVLK+LILKLA+E KI+LD+DE IKG KD LQP+R RS P++++ + +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRK--------RSKKFSQPQQLVMLNKSFSK
Query: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
+ + +N SY EEVDNS + +QRTSVFDRIKP TTR VFQR+SMA EEENQC ST TR SAF+RLS+STSKK +PSTS FDRLK+ +DQ
Subjt: TFHKKTKENLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQP
Query: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
+R+M +L+ K F E N D K+HS +PS RK SV I EGSL
Subjt: KRKMDNLEVKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
| A0A5D3CA53 Retrotransposon gag protein | 1.3e-49 | 54.89 | Show/hide |
Query: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKE
KVDDP YCKYHRVI H +E+CFVLK+LILKLA + KIELD+DEVAQ+N A + + P L + F + +L + T +
Subjt: KVDDPKYCKYHRVIGHPVERCFVLKDLILKLAKEGKIELDLDEVAQSNLATIKGNNKHQRKKDPKKLQPKRKRSKKFSQPQQLVMLNKSFSKTFHKKTKE
Query: NLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLE
N SY EEVDNS + +QRT VFDRIKP TTR SVFQR+SMA EEE QC ST TR S F+RLS+STSKK +PSTS FDRLK+T+DQ +++M +L+
Subjt: NLATSYCIDVEEVDNSKKSEQRTSVFDRIKPPTTRPSVFQRMSMAATEEENQCSMSTSTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLE
Query: VKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
K F E N D K+HS VPSR KRK SV I TEGSL
Subjt: VKLFDEVNRDKKLHSSVPSRMKRKFSVLITTEGSL
|
|
