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Lag0016318 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016318
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionF-box domain-containing protein
Genome locationchr12:36275378..36276016
RNA-Seq ExpressionLag0016318
SyntenyLag0016318
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN46440.1 hypothetical protein Csa_005073 [Cucumis sativus]2.6e-1649.09Show/hide
Query:  VMWSPSEYPTMHCIDFDGKYSQGMNVDATFRFDPSSSMDIRISNSCNGLLCIVNSSREPYKTASVA-ILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSS
        + W P + P M C+DF  K+SQGMNV ++F FD   S D +I+NSCNGLLCI+  ++  YKT+ VA I+NPMTNEY       +     GF   G GFSS
Subjt:  VMWSPSEYPTMHCIDFDGKYSQGMNVDATFRFDPSSSMDIRISNSCNGLLCIVNSSREPYKTASVA-ILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSS

Query:  KTMQYKLARV
        K+ +YK AR+
Subjt:  KTMQYKLARV

TYK13067.1 putative F-box protein [Cucumis melo var. makuwa]4.2e-1446.3Show/hide
Query:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ
        T++C+DFD  YS+GMN   +F F P   +SS  I I N+CNGLL ++ S R+P   + V  ILNPMTNEY KF   + + +      Y YG GF+ K  Q
Subjt:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ

Query:  YKLARVSY
        YK+AR S+
Subjt:  YKLARVSY

XP_004134745.1 F-box protein At3g07870 [Cucumis sativus]1.8e-1244.44Show/hide
Query:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ
        T++C+DFD  Y +GMN   +F F P   +S   I I N+CNGLL ++ S R+    + V  ILNPMTNEY KF   + + +      Y YG GF+ KT Q
Subjt:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ

Query:  YKLARVSY
        YK+AR S+
Subjt:  YKLARVSY

XP_008439950.1 PREDICTED: putative F-box protein At3g21120 [Cucumis melo]4.2e-1446.3Show/hide
Query:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ
        T++C+DFD  YS+GMN   +F F P   +SS  I I N+CNGLL ++ S R+P   + V  ILNPMTNEY KF   + + +      Y YG GF+ K  Q
Subjt:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ

Query:  YKLARVSY
        YK+AR S+
Subjt:  YKLARVSY

XP_038880514.1 putative F-box protein At1g46984 [Benincasa hispida]2.2e-1528.25Show/hide
Query:  MHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGL--LCIVNSSREPYKTASVAILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSSKTMQYK
        +HC+D D ++ +GM+  A+F F P   S S  I I NSC+GL  L I    R  ++   V +LNPMTNEY K      +      Y YG GFS +T QYK
Subjt:  MHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGL--LCIVNSSREPYKTASVAILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSSKTMQYK

Query:  LARVSY------------GDMCQHCKV-------------------QWVG--------------------------------------------------
        LAR  Y            G  C+   V                    WVG                                                  
Subjt:  LARVSY------------GDMCQHCKV-------------------QWVG--------------------------------------------------

Query:  ---------------------------LPSRTN------------FQLIKAFQNGQILCLLRAAYLFLYDPQTGNIQPLID-DKLCETTFWIYQIHSPLN
                                   LP   +             QLIKA ++G ILCL    YL LYDP+T   + L D D   +   W+YQI S  N
Subjt:  ---------------------------LPSRTN------------FQLIKAFQNGQILCLLRAAYLFLYDPQTGNIQPLID-DKLCETTFWIYQIHSPLN

Query:  FNSLDNIL
        FNSL NIL
Subjt:  FNSLDNIL

TrEMBL top hitse value%identityAlignment
A0A0A0K9K4 F-box domain-containing protein1.3e-1649.09Show/hide
Query:  VMWSPSEYPTMHCIDFDGKYSQGMNVDATFRFDPSSSMDIRISNSCNGLLCIVNSSREPYKTASVA-ILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSS
        + W P + P M C+DF  K+SQGMNV ++F FD   S D +I+NSCNGLLCI+  ++  YKT+ VA I+NPMTNEY       +     GF   G GFSS
Subjt:  VMWSPSEYPTMHCIDFDGKYSQGMNVDATFRFDPSSSMDIRISNSCNGLLCIVNSSREPYKTASVA-ILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSS

Query:  KTMQYKLARV
        K+ +YK AR+
Subjt:  KTMQYKLARV

A0A0A0KJY9 F-box domain-containing protein8.5e-1344.44Show/hide
Query:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ
        T++C+DFD  Y +GMN   +F F P   +S   I I N+CNGLL ++ S R+    + V  ILNPMTNEY KF   + + +      Y YG GF+ KT Q
Subjt:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ

Query:  YKLARVSY
        YK+AR S+
Subjt:  YKLARVSY

A0A0A0M1M5 F-box domain-containing protein1.1e-1239.64Show/hide
Query:  SEYPTMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIV--NSSREPYKTASVAILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSSK
        S +P +HC++FD ++++GM+  A+F F P   S S  I I NSC+GL+ ++     R  ++   V +LNP+TNEY K      +      Y YG GFS  
Subjt:  SEYPTMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIV--NSSREPYKTASVAILNPMTNEYKKFVRCEDQQYEDGFYLYGFGFSSK

Query:  TMQYKLARVSY
        T QYKLAR  +
Subjt:  TMQYKLARVSY

A0A1S3B0Q6 putative F-box protein At3g211202.0e-1446.3Show/hide
Query:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ
        T++C+DFD  YS+GMN   +F F P   +SS  I I N+CNGLL ++ S R+P   + V  ILNPMTNEY KF   + + +      Y YG GF+ K  Q
Subjt:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ

Query:  YKLARVSY
        YK+AR S+
Subjt:  YKLARVSY

A0A5D3CM94 Putative F-box protein2.0e-1446.3Show/hide
Query:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ
        T++C+DFD  YS+GMN   +F F P   +SS  I I N+CNGLL ++ S R+P   + V  ILNPMTNEY KF   + + +      Y YG GF+ K  Q
Subjt:  TMHCIDFDGKYSQGMNVDATFRFDP---SSSMDIRISNSCNGLLCIVNSSREPYKTASV-AILNPMTNEYKKFVRCEDQQY--EDGFYLYGFGFSSKTMQ

Query:  YKLARVSY
        YK+AR S+
Subjt:  YKLARVSY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTAAGCTGTTGAATGAATCGATACCATTCATAGGTATACAGTCCAAAGTTATGTGGTCACCATCAGAGTATCCTACAATGCATTGCATTGACTTTGATGGCAAATA
TTCACAAGGGATGAACGTTGATGCCACATTTAGATTCGACCCTAGTTCCTCAATGGATATTAGAATTTCAAATTCCTGTAACGGATTGCTATGCATTGTCAATAGCAGCC
GCGAACCTTATAAAACAGCTTCTGTTGCCATATTAAACCCCATGACAAATGAGTACAAAAAGTTTGTCAGATGCGAAGATCAACAGTATGAAGATGGATTTTATTTGTAT
GGATTTGGGTTTAGCTCGAAAACGATGCAGTACAAATTAGCTAGGGTTTCGTATGGTGATATGTGCCAACATTGTAAGGTACAGTGGGTGGGACTTCCATCGAGGACCAA
TTTTCAACTCATTAAAGCATTCCAAAATGGACAGATTTTGTGTCTCTTGCGTGCTGCCTATTTGTTCTTGTACGATCCACAAACTGGGAACATACAGCCATTGATTGATG
ATAAGCTATGTGAAACAACTTTTTGGATTTATCAAATTCACTCACCTCTCAATTTTAATTCTCTTGACAACATTTTGAGGGCTCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTTAAGCTGTTGAATGAATCGATACCATTCATAGGTATACAGTCCAAAGTTATGTGGTCACCATCAGAGTATCCTACAATGCATTGCATTGACTTTGATGGCAAATA
TTCACAAGGGATGAACGTTGATGCCACATTTAGATTCGACCCTAGTTCCTCAATGGATATTAGAATTTCAAATTCCTGTAACGGATTGCTATGCATTGTCAATAGCAGCC
GCGAACCTTATAAAACAGCTTCTGTTGCCATATTAAACCCCATGACAAATGAGTACAAAAAGTTTGTCAGATGCGAAGATCAACAGTATGAAGATGGATTTTATTTGTAT
GGATTTGGGTTTAGCTCGAAAACGATGCAGTACAAATTAGCTAGGGTTTCGTATGGTGATATGTGCCAACATTGTAAGGTACAGTGGGTGGGACTTCCATCGAGGACCAA
TTTTCAACTCATTAAAGCATTCCAAAATGGACAGATTTTGTGTCTCTTGCGTGCTGCCTATTTGTTCTTGTACGATCCACAAACTGGGAACATACAGCCATTGATTGATG
ATAAGCTATGTGAAACAACTTTTTGGATTTATCAAATTCACTCACCTCTCAATTTTAATTCTCTTGACAACATTTTGAGGGCTCATTGA
Protein sequenceShow/hide protein sequence
MFKLLNESIPFIGIQSKVMWSPSEYPTMHCIDFDGKYSQGMNVDATFRFDPSSSMDIRISNSCNGLLCIVNSSREPYKTASVAILNPMTNEYKKFVRCEDQQYEDGFYLY
GFGFSSKTMQYKLARVSYGDMCQHCKVQWVGLPSRTNFQLIKAFQNGQILCLLRAAYLFLYDPQTGNIQPLIDDKLCETTFWIYQIHSPLNFNSLDNILRAH