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Lag0016355 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016355
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:36748513..36756366
RNA-Seq ExpressionLag0016355
SyntenyLag0016355
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI09819.1 hypothetical protein PRUPE_4G011200 [Prunus persica]1.8e-1043.27Show/hide
Query:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK
        FTS+G+W++  LK+   +   D I  IP+ +    D LIWHY+R G YSVKSG++L    K K+ G  SA     S+    +W LKIP+KIK F W+   
Subjt:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK

Query:  KFLP
         FLP
Subjt:  KFLP

XP_010496008.1 PREDICTED: uncharacterized protein LOC104773141 [Camelina sativa]5.6e-1532.45Show/hide
Query:  NLLKSYEKAFGESINLAKSAILFSPRINNNMKDYLSSILGVN-----NNFTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVK
        +++ SY +A G+ +NL KS+I+F  ++  +++  L S++G++      ++  T +W L  L+E         IRS+P+   +  D+L+WH+ ++GKYSVK
Subjt:  NLLKSYEKAFGESINLAKSAILFSPRINNNMKDYLSSILGVN-----NNFTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVK

Query:  SGHKLFMKFKIDGISASFSPLS-RIRNNLWKLKIPSKIKHFCWKALKKFLP
        SG++L  +   D     + P    +R   WKL +PS+I+HF W+     LP
Subjt:  SGHKLFMKFKIDGISASFSPLS-RIRNNLWKLKIPSKIKHFCWKALKKFLP

XP_017239525.1 PREDICTED: uncharacterized protein LOC108212308 [Daucus carota subsp. sativus]2.2e-1139.8Show/hide
Query:  NFTSTGEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDRTGKYSVKSGHKLFMKFK---IDGISASFSPLSRIRNNLWKLKIPSKIKHFCWK
        +F S+G+W+L KLKE V +     I +IPI+R N  D+L+WH+D  G Y+VKSG+ + +  K       S+S +P       LW +  P K+KHF W+
Subjt:  NFTSTGEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDRTGKYSVKSGHKLFMKFK---IDGISASFSPLSRIRNNLWKLKIPSKIKHFCWK

XP_022158377.1 uncharacterized protein LOC111024874 [Momordica charantia]4.0e-1335.67Show/hide
Query:  GRELLVVKNLLK----SYEKAFGESINLAKSAILFSPRINNNMKDYLSSILGVNNNFTSTGEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDR
        GR+LLV    L+    S  KAF +   L +       R NN   D       V +  T+ G WD+  +  +      D I S+PI+  NL D  +WHYD+
Subjt:  GRELLVVKNLLK----SYEKAFGESINLAKSAILFSPRINNNMKDYLSSILGVNNNFTSTGEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDR

Query:  TGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP
         G YSV+SG+KL+M  K +  SAS +      N++WKL +P+KIK F W++  + +P
Subjt:  TGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP

XP_024035599.1 uncharacterized protein LOC112096407 [Citrus clementina]5.7e-1243.75Show/hide
Query:  EWDLEKLKEAVMEFGYDTIRSIPINRN-LIDKLIWHYDRTGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP
        +W+   + ++      D I+SI + R    D++IWHYDR G YSVKSG++L +K K      S +  S+   NLWKL +P KIK F WKA K FLP
Subjt:  EWDLEKLKEAVMEFGYDTIRSIPINRN-LIDKLIWHYDRTGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP

TrEMBL top hitse value%identityAlignment
A0A251NPF0 Reverse transcriptase domain-containing protein8.9e-1143.27Show/hide
Query:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK
        FTS+G+W++  LK+   +   D I  IP+ +    D LIWHY+R G YSVKSG++L    K K+ G  SA     S+    +W LKIP+KIK F W+   
Subjt:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK

Query:  KFLP
         FLP
Subjt:  KFLP

A0A6J1DX30 uncharacterized protein LOC1110248741.9e-1335.67Show/hide
Query:  GRELLVVKNLLK----SYEKAFGESINLAKSAILFSPRINNNMKDYLSSILGVNNNFTSTGEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDR
        GR+LLV    L+    S  KAF +   L +       R NN   D       V +  T+ G WD+  +  +      D I S+PI+  NL D  +WHYD+
Subjt:  GRELLVVKNLLK----SYEKAFGESINLAKSAILFSPRINNNMKDYLSSILGVNNNFTSTGEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDR

Query:  TGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP
         G YSV+SG+KL+M  K +  SAS +      N++WKL +P+KIK F W++  + +P
Subjt:  TGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP

A0A803PM68 Uncharacterized protein1.2e-1036.08Show/hide
Query:  GEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDRTGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP
        GEWD E ++        + I  +P +   + DK++WHY + G+YSV+SG+++    ++  I ++     R    LWKLKIP K+KHF WK    +LP
Subjt:  GEWDLEKLKEAVMEFGYDTIRSIPINR-NLIDKLIWHYDRTGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLP

M5W5F3 Reverse transcriptase domain-containing protein (Fragment)8.9e-1143.27Show/hide
Query:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK
        FTS+G+W++  LK+   +   D I  IP+ +    D LIWHY+R G YSVKSG++L    K K+ G  SA     S+    +W LKIP+KIK F W+   
Subjt:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK

Query:  KFLP
         FLP
Subjt:  KFLP

M5WJW2 Reverse transcriptase domain-containing protein8.9e-1143.27Show/hide
Query:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK
        FTS+G+W++  LK+   +   D I  IP+ +    D LIWHY+R G YSVKSG++L    K K+ G  SA     S+    +W LKIP+KIK F W+   
Subjt:  FTSTGEWDLEKLKEAVMEFGYDTIRSIPI-NRNLIDKLIWHYDRTGKYSVKSGHKL--FMKFKIDG-ISASFSPLSRIRNNLWKLKIPSKIKHFCWKALK

Query:  KFLP
         FLP
Subjt:  KFLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09510.1 Ribonuclease H-like superfamily protein5.7e-1031.91Show/hide
Query:  GESINLAKSAILFS--PRINNNMKDYLSSILGVNNNFTSTGE---WDLEKLKEAVMEFGYDTIRSIPINRN-LIDKLIWHYDRTGKYSVKSGHKLFMKFK
        G++I +    I+ S  PR  N  + Y    + +NN F   G    WD  K+ + V +  +  I  I + ++   DK+IW+Y+ TG+Y+V+SG+ L     
Subjt:  GESINLAKSAILFS--PRINNNMKDYLSSILGVNNNFTSTGE---WDLEKLKEAVMEFGYDTIRSIPINRN-LIDKLIWHYDRTGKYSVKSGHKLFMKFK

Query:  IDGISASFSPLSRI--RNNLWKLKIPSKIKHFCWKALKKFL
           I A   P   I  +  +W L I  K+KHF W+AL + L
Subjt:  IDGISASFSPLSRI--RNNLWKLKIPSKIKHFCWKALKKFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTCATCTTCGTGTAGGCTATATGACCGCTTGACGAAGAGGAGATATGAAGGAGCAAAGCTTTCGAACAATATTGAATGTAAAAGGGATCTGTTGAGGCCAAAATT
TGGCCAAGCGATTCACCTGACATCAACGGACACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAATACGTCTGTATTGAATACAGTGCAGGCCGTATCACATA
GTGTTACTAGGATAAGGGTTCGTGCTCGGCCTCAGCAAAATGTGTCCGGTCTCGGCCTTGGCCAGGGATTAGTCTCTTCCCGATGGTGCGTACACTCAGTCGAGGTCTTG
GAATCTCATCTCGAGGGTGCGCGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAAGGTGCGTACACTCAGTCGAGGTCTTGGAATCTCATCTTGAAGCGTTTTCATG
TCTCATAACTCTCCCTTGTTGGCATTTGTGGGCATCGGCCTCCTACGGGTCAACCTCAGCTCCTTGCATGTTGGCTCTGTCTTGTCACCGAGACATTCGACATCATCATT
CTCGAGCGTATGTCGACTCTGCTAAGGCAATTTTGGACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCGGACTGGAAGATGGACCAAGGAGGCAA
AACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCATGGGCCGAGGCCGAGCCCGTTCGGTCTCGTCTGGTCTC
CACCGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGA
GGGGATCCCGAATTCTATCCCTAAACTCTACTCTCTATTCTCCGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCATTCTGTTTGCTGACTTAAGCATAGGAGCC
GGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTCAACTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGATCCTC
TGGCCAAAATCGACCATCAACAGTAAGGCCTGGGAGGGAACTGTTGGTGGTCAAAAACCTTCTGAAGAGCTACGAAAAGGCCTTTGGGGAGTCAATTAATTTGGCAAAAT
CTGCAATCCTGTTCTCTCCTCGGATAAACAATAACATGAAAGATTACCTAAGTTCTATTTTAGGTGTTAATAATAATTTCACTTCTACTGGTGAATGGGACCTGGAGAAA
TTGAAGGAAGCAGTGATGGAATTTGGTTATGATACTATTAGGAGTATTCCAATTAATAGAAACTTAATTGATAAACTAATTTGGCACTATGATAGAACAGGGAAGTATTC
TGTGAAAAGTGGACATAAGCTCTTCATGAAGTTTAAGATAGATGGTATTTCTGCAAGCTTCTCCCCTCTGAGTAGAATTCGAAATAATCTATGGAAGCTCAAAATTCCCT
CGAAAATTAAACACTTCTGTTGGAAAGCCCTAAAGAAATTTCTTCCCCAACAATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCTCATCTTCGTGTAGGCTATATGACCGCTTGACGAAGAGGAGATATGAAGGAGCAAAGCTTTCGAACAATATTGAATGTAAAAGGGATCTGTTGAGGCCAAAATT
TGGCCAAGCGATTCACCTGACATCAACGGACACCCCCGCTCGCATGTCTCCTACATGGACGCCTTGGATCAATACGTCTGTATTGAATACAGTGCAGGCCGTATCACATA
GTGTTACTAGGATAAGGGTTCGTGCTCGGCCTCAGCAAAATGTGTCCGGTCTCGGCCTTGGCCAGGGATTAGTCTCTTCCCGATGGTGCGTACACTCAGTCGAGGTCTTG
GAATCTCATCTCGAGGGTGCGCGTACACTCAGTCGAGGTCTTGGAATCTCATCTCGAAGGTGCGTACACTCAGTCGAGGTCTTGGAATCTCATCTTGAAGCGTTTTCATG
TCTCATAACTCTCCCTTGTTGGCATTTGTGGGCATCGGCCTCCTACGGGTCAACCTCAGCTCCTTGCATGTTGGCTCTGTCTTGTCACCGAGACATTCGACATCATCATT
CTCGAGCGTATGTCGACTCTGCTAAGGCAATTTTGGACCACCCCGATATACAAGGAGCTGACGAGGACAACCGGGGAGAAATCGGACTGGAAGATGGACCAAGGAGGCAA
AACCGGCAAGTGGGACGGGCCAAGACCGAAGGGGTCGGGTTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCATGGGCCGAGGCCGAGCCCGTTCGGTCTCGTCTGGTCTC
CACCGCCTCTGGCTGCCCCGGTTTCGCCTGGTTTGACCTAAAACGCCTCCGAATACCTAAAAACCCTAGGAGGATGAGCAGGTATTTATATCCCTCTTCGCCACTGAAGA
GGGGATCCCGAATTCTATCCCTAAACTCTACTCTCTATTCTCCGCTTTCTCCTCTTGCTCTTACTTTTCCACGCCCTACCATTCTGTTTGCTGACTTAAGCATAGGAGCC
GGTGTGGCGAGCACCACACCGGTGTGCAGGTTTACTGTCTTGCAGGCCACGTCTTCCCCCTCAACTACAAATTTACCGTTGGTGGCACGTGAAGGTCAGGTGAGATCCTC
TGGCCAAAATCGACCATCAACAGTAAGGCCTGGGAGGGAACTGTTGGTGGTCAAAAACCTTCTGAAGAGCTACGAAAAGGCCTTTGGGGAGTCAATTAATTTGGCAAAAT
CTGCAATCCTGTTCTCTCCTCGGATAAACAATAACATGAAAGATTACCTAAGTTCTATTTTAGGTGTTAATAATAATTTCACTTCTACTGGTGAATGGGACCTGGAGAAA
TTGAAGGAAGCAGTGATGGAATTTGGTTATGATACTATTAGGAGTATTCCAATTAATAGAAACTTAATTGATAAACTAATTTGGCACTATGATAGAACAGGGAAGTATTC
TGTGAAAAGTGGACATAAGCTCTTCATGAAGTTTAAGATAGATGGTATTTCTGCAAGCTTCTCCCCTCTGAGTAGAATTCGAAATAATCTATGGAAGCTCAAAATTCCCT
CGAAAATTAAACACTTCTGTTGGAAAGCCCTAAAGAAATTTCTTCCCCAACAATTCTAA
Protein sequenceShow/hide protein sequence
MISSSCRLYDRLTKRRYEGAKLSNNIECKRDLLRPKFGQAIHLTSTDTPARMSPTWTPWINTSVLNTVQAVSHSVTRIRVRARPQQNVSGLGLGQGLVSSRWCVHSVEVL
ESHLEGARTLSRGLGISSRRCVHSVEVLESHLEAFSCLITLPCWHLWASASYGSTSAPCMLALSCHRDIRHHHSRAYVDSAKAILDHPDIQGADEDNRGEIGLEDGPRRQ
NRQVGRAKTEGVGFLARPPARPRPWAEAEPVRSRLVSTASGCPGFAWFDLKRLRIPKNPRRMSRYLYPSSPLKRGSRILSLNSTLYSPLSPLALTFPRPTILFADLSIGA
GVASTTPVCRFTVLQATSSPSTTNLPLVAREGQVRSSGQNRPSTVRPGRELLVVKNLLKSYEKAFGESINLAKSAILFSPRINNNMKDYLSSILGVNNNFTSTGEWDLEK
LKEAVMEFGYDTIRSIPINRNLIDKLIWHYDRTGKYSVKSGHKLFMKFKIDGISASFSPLSRIRNNLWKLKIPSKIKHFCWKALKKFLPQQF