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Lag0016376 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016376
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:36932006..36932910
RNA-Seq ExpressionLag0016376
SyntenyLag0016376
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A6J1DNV9 uncharacterized protein LOC1110224039.8e-0432.73Show/hide
Query:  WTIRGSEGSLVLVGFKLCKMDWSILILEAVAVNEGLQNYLNICKDYSTPLIDELDSVSLIKILNLQESDLSEAKIVTDKIEDLARGTRNLSFNWCPRSCN
        W IR  +G +VL G +  +   ++ +LEA A+ EGL+N  N+      PL  E DS  +  +LN +  DL++   V ++I +L      L+F    R  N
Subjt:  WTIRGSEGSLVLVGFKLCKMDWSILILEAVAVNEGLQNYLNICKDYSTPLIDELDSVSLIKILNLQESDLSEAKIVTDKIEDLARGTRNLSFNWCPRSCN

Query:  RATNSLTQEA
           +SL Q A
Subjt:  RATNSLTQEA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAATCAAATGGGTTGAGAATCCTAAAGGCTTGTTCACGGTCGAGATTGGGAGACTATCGTTTTTTAGGAAGAGCTATCGAAGATATTAGAGAAGGAAGACTTGA
GCAAAGCGATGATCCTAATAGATCCAAACCTGGAAGAAGGCAGTCTGAAGAACCACCTGAGTCAATCATCGTGGACCCCCTCCCCCACGTCGACTCTAAAGCTAAACGTG
GATGCCTCTTGGAGTCGAGTTTCTGGAATTGGAGGTGTTGGACGATCCGTGGCTCTGAGGGATCTTTGGTTCTAGTTGGATTCAAGTTATGCAAGATGGATTGGTCAATT
TTGATTCTGGAAGCCGTAGCGGTTAATGAGGGCCTTCAAAATTACCTTAATATCTGCAAGGACTATTCAACTCCCTTGATAGATGAATTGGATTCGGTCTCTTTGATAAA
AATCCTTAACCTGCAAGAATCAGACCTCTCTGAAGCCAAAATCGTGACAGACAAAATCGAAGATCTAGCAAGGGGTACGAGGAACTTATCTTTCAATTGGTGCCCAAGAT
CTTGCAATCGGGCAACCAACTCGTTGACGCAAGAAGCCATCAAAGCCAGCTCGATGTGCTCTCTATCAATAGGATTTACAACGGATCAGGCGATTCCACATTTTTTCCTG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAATCAAATGGGTTGAGAATCCTAAAGGCTTGTTCACGGTCGAGATTGGGAGACTATCGTTTTTTAGGAAGAGCTATCGAAGATATTAGAGAAGGAAGACTTGA
GCAAAGCGATGATCCTAATAGATCCAAACCTGGAAGAAGGCAGTCTGAAGAACCACCTGAGTCAATCATCGTGGACCCCCTCCCCCACGTCGACTCTAAAGCTAAACGTG
GATGCCTCTTGGAGTCGAGTTTCTGGAATTGGAGGTGTTGGACGATCCGTGGCTCTGAGGGATCTTTGGTTCTAGTTGGATTCAAGTTATGCAAGATGGATTGGTCAATT
TTGATTCTGGAAGCCGTAGCGGTTAATGAGGGCCTTCAAAATTACCTTAATATCTGCAAGGACTATTCAACTCCCTTGATAGATGAATTGGATTCGGTCTCTTTGATAAA
AATCCTTAACCTGCAAGAATCAGACCTCTCTGAAGCCAAAATCGTGACAGACAAAATCGAAGATCTAGCAAGGGGTACGAGGAACTTATCTTTCAATTGGTGCCCAAGAT
CTTGCAATCGGGCAACCAACTCGTTGACGCAAGAAGCCATCAAAGCCAGCTCGATGTGCTCTCTATCAATAGGATTTACAACGGATCAGGCGATTCCACATTTTTTCCTG
TAG
Protein sequenceShow/hide protein sequence
MMKSNGLRILKACSRSRLGDYRFLGRAIEDIREGRLEQSDDPNRSKPGRRQSEEPPESIIVDPLPHVDSKAKRGCLLESSFWNWRCWTIRGSEGSLVLVGFKLCKMDWSI
LILEAVAVNEGLQNYLNICKDYSTPLIDELDSVSLIKILNLQESDLSEAKIVTDKIEDLARGTRNLSFNWCPRSCNRATNSLTQEAIKASSMCSLSIGFTTDQAIPHFFL