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Lag0016390 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016390
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:37104073..37105204
RNA-Seq ExpressionLag0016390
SyntenyLag0016390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015024379.2 mucin-2 [Drosophila virilis]8.5e-0429.92Show/hide
Query:  PTTHRSSDPTGKVDAPAPGRTISASSSLTDKPRPPQTQPHASVEADTPTHSSHQICPNKTETATHSTPPHALPSPKPEPETSSP----PPPLPENRKLQR
        P T  +S P+  +  P+       ++ +T  P PP T   A+     PT +S +  P  T T T + PP    +  P P  ++P    PPP         
Subjt:  PTTHRSSDPTGKVDAPAPGRTISASSSLTDKPRPPQTQPHASVEADTPTHSSHQICPNKTETATHSTPPHALPSPKPEPETSSP----PPPLPENRKLQR

Query:  APPQATKNASYRHPDPVSPPSSPSPKRPKPQPTHDACKHSPSDTAADQIAPPASSYPTLTRPHLPPATAAASIAP--------STSSHSFNRAAKPPPTQ
         PP  T  A+   P P +PP   +P  P P  T      SP  T   + APP ++ PT + P  PP T  A+ AP         T+      +A PPPT 
Subjt:  APPQATKNASYRHPDPVSPPSSPSPKRPKPQPTHDACKHSPSDTAADQIAPPASSYPTLTRPHLPPATAAASIAP--------STSSHSFNRAAKPPPTQ

Query:  TSHLRHLPAAPSHHHYQTCRNPNAVAPP---APFRRAVTPPLPTTQAAENPKTP
        T+      +APS         P+  APP    P   A  PP  TT A   P  P
Subjt:  TSHLRHLPAAPSHHHYQTCRNPNAVAPP---APFRRAVTPPLPTTQAAENPKTP

XP_039451056.1 extensin-like [Culex pipiens pallens]3.1e-0630.2Show/hide
Query:  PTTHRSSDPTGKVDAPAPGRTISASSSLTDKPRP-----PQTQPHASVEADTP--THSSHQICPNKTETATHSTPPHALPSPKPEPETSSPPPPLPENRK
        P TH    P      P P  T + + + T  P P     P   PH     +TP   H +H   PN T T  + T PH  P P+P   T +P PP P    
Subjt:  PTTHRSSDPTGKVDAPAPGRTISASSSLTDKPRP-----PQTQPHASVEADTP--THSSHQICPNKTETATHSTPPHALPSPKPEPETSSPPPPLPENRK

Query:  LQRAPPQATKNASYRHPDPVSPPSSPSPKRPKPQPTHDACK----HSPSDTAADQIAPPASSYPTLTRPHLPPATAAASIAPSTSSHSFNRAAKPPPTQT
            P   T      HP+P +P + P+P  P P P H   +    H+P  T   Q  PP  + PT  +PH PP T   +  P+T + +      P PTQ 
Subjt:  LQRAPPQATKNASYRHPDPVSPPSSPSPKRPKPQPTHDACK----HSPSDTAADQIAPPASSYPTLTRPHLPPATAAASIAPSTSSHSFNRAAKPPPTQT

Query:  SHLRHLPAAPSHHHYQTCRNPNAVAPPAPFRRAVTP-----PLPTTQAAENPKTP
        +H +H    P  HH     + +    P P  +  TP     P  T    ++P TP
Subjt:  SHLRHLPAAPSHHHYQTCRNPNAVAPPAPFRRAVTP-----PLPTTQAAENPKTP

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACATTCCGAAAGGCCTCCACATTCACACGCTTTGAGGAAAACACTTTCCCTACCACACACAGATCTAGCGATCCCACCGGCAAAGTCGATGCTCCCGCCCCTGGCCG
AACCATCTCTGCCTCCTCGTCCCTAACCGACAAACCCAGACCACCACAAACTCAGCCGCACGCATCCGTCGAAGCAGACACACCCACCCACTCTTCCCACCAAATCTGCC
CAAACAAGACTGAAACGGCCACACACTCCACACCGCCACACGCCTTGCCGAGCCCAAAACCAGAACCAGAAACCTCCTCCCCGCCGCCGCCCCTACCAGAAAACCGCAAA
CTACAGAGAGCCCCACCGCAAGCTACCAAAAACGCAAGCTACAGACACCCAGACCCAGTCTCGCCGCCTTCCTCTCCCTCCCCTAAGCGACCCAAACCTCAGCCCACACA
CGATGCCTGCAAACACTCACCCTCAGACACCGCCGCAGATCAGATCGCGCCGCCGGCCTCCTCCTACCCAACTCTGACAAGACCGCACCTACCCCCAGCCACCGCCGCAG
CTTCAATCGCGCCGTCGACCTCCTCCCACAGCTTCAATCGCGCCGCCAAGCCTCCTCCTACCCAAACGTCGCACCTCCGTCACCTTCCCGCCGCGCCGTCACATCACCAC
TACCAAACCTGCCGAAACCCTAACGCCGTCGCACCTCCAGCACCGTTCCGCCGCGCCGTCACGCCACCGCTACCAACTACCCAGGCTGCCGAAAACCCTAAAACCCCATT
TTGGGGAGAACCCTCATATCGAGGGAGAACTCTCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGACATTCCGAAAGGCCTCCACATTCACACGCTTTGAGGAAAACACTTTCCCTACCACACACAGATCTAGCGATCCCACCGGCAAAGTCGATGCTCCCGCCCCTGGCCG
AACCATCTCTGCCTCCTCGTCCCTAACCGACAAACCCAGACCACCACAAACTCAGCCGCACGCATCCGTCGAAGCAGACACACCCACCCACTCTTCCCACCAAATCTGCC
CAAACAAGACTGAAACGGCCACACACTCCACACCGCCACACGCCTTGCCGAGCCCAAAACCAGAACCAGAAACCTCCTCCCCGCCGCCGCCCCTACCAGAAAACCGCAAA
CTACAGAGAGCCCCACCGCAAGCTACCAAAAACGCAAGCTACAGACACCCAGACCCAGTCTCGCCGCCTTCCTCTCCCTCCCCTAAGCGACCCAAACCTCAGCCCACACA
CGATGCCTGCAAACACTCACCCTCAGACACCGCCGCAGATCAGATCGCGCCGCCGGCCTCCTCCTACCCAACTCTGACAAGACCGCACCTACCCCCAGCCACCGCCGCAG
CTTCAATCGCGCCGTCGACCTCCTCCCACAGCTTCAATCGCGCCGCCAAGCCTCCTCCTACCCAAACGTCGCACCTCCGTCACCTTCCCGCCGCGCCGTCACATCACCAC
TACCAAACCTGCCGAAACCCTAACGCCGTCGCACCTCCAGCACCGTTCCGCCGCGCCGTCACGCCACCGCTACCAACTACCCAGGCTGCCGAAAACCCTAAAACCCCATT
TTGGGGAGAACCCTCATATCGAGGGAGAACTCTCAGATAG
Protein sequenceShow/hide protein sequence
MTFRKASTFTRFEENTFPTTHRSSDPTGKVDAPAPGRTISASSSLTDKPRPPQTQPHASVEADTPTHSSHQICPNKTETATHSTPPHALPSPKPEPETSSPPPPLPENRK
LQRAPPQATKNASYRHPDPVSPPSSPSPKRPKPQPTHDACKHSPSDTAADQIAPPASSYPTLTRPHLPPATAAASIAPSTSSHSFNRAAKPPPTQTSHLRHLPAAPSHHH
YQTCRNPNAVAPPAPFRRAVTPPLPTTQAAENPKTPFWGEPSYRGRTLR