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Lag0016400 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016400
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionActin-related protein 2/3 complex subunit 4
Genome locationchr12:37306985..37311484
RNA-Seq ExpressionLag0016400
SyntenyLag0016400
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR008384 - Actin-related protein 2/3 complex subunit 4
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6478264.1 hypothetical protein ZIOFF_061699 [Zingiber officinale]7.3e-2189.66Show/hide
Query:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGY
        NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINS+RISLK Q DGY
Subjt:  NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGY

OMO88611.1 ARP2/3 complex, 20kDa subunit (P20-Arc) [Corchorus olitorius]2.1e-2087.93Show/hide
Query:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLK ++
Subjt:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

XP_008456149.1 PREDICTED: actin-related protein 2/3 complex subunit 4-like [Cucumis melo]1.6e-2078.57Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK ++   L  +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV

XP_008457157.1 PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis melo]1.6e-2078.57Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK ++   L  +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV

XP_011649071.1 actin-related protein 2/3 complex subunit 4 isoform X1 [Cucumis sativus]1.6e-2078.57Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK ++   L  +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV

TrEMBL top hitse value%identityAlignment
A0A0A0LHM5 Actin-related protein 2/3 complex subunit 47.9e-2178.57Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK ++   L  +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV

A0A1R3J1B1 ARP2/3 complex, 20kDa subunit (P20-Arc)1.0e-2087.93Show/hide
Query:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        KF+NFPCQEVERHNKPEVELKTS+ELLLNP+LICRNE+EKCLIETSINSLRISLK ++
Subjt:  KFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

A0A1S3C2N8 Actin-related protein 2/3 complex subunit 47.9e-2178.57Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK ++   L  +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV

A0A1S3C5J1 Actin-related protein 2/3 complex subunit 47.9e-2178.57Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV
        L A +   NFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLK ++   L  +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV

A0A6J1H2P7 Actin-related protein 2/3 complex subunit 41.3e-2077.14Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV
        L A +   NFPCQEVERHNKPEVELKTSSEL+LNPILICRNESEKCLIETSINSLRISLK ++   L  +
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQRDGYLSPV

SwissProt top hitse value%identityAlignment
F4JUL9 Actin-related protein 2/3 complex subunit 44.0e-2280.95Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLK ++
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

O96625 Actin-related protein 2/3 complex subunit 43.1e-1460.32Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        L A +   NF  Q VERHNKPEVE+KTS EL+LNP++I RN++E+ LIETSINS+RIS+  ++
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

P59998 Actin-related protein 2/3 complex subunit 44.9e-1257.14Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+  ++
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

Q148J6 Actin-related protein 2/3 complex subunit 44.9e-1257.14Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        L A +   NF  Q VERHNKPEVE+++S ELLL P+ I RNE EK LIE SINS+R+S+  ++
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

Q641G7 Actin-related protein 2/3 complex subunit 42.9e-1257.14Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        L A +   NF  Q VERHNKPEVE+++S ELLL P++I RNE EK LIE SINS+R+S+  ++
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

Arabidopsis top hitse value%identityAlignment
AT4G14147.1 protein binding2.9e-2380.95Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLK ++
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR

AT4G14147.2 protein binding2.9e-2380.95Show/hide
Query:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR
        L A +   NFPCQEVERHNKPEVELKTS ELLLNP+LICRNE+EKCLIETSINSLRISLK ++
Subjt:  LAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEKCLIETSINSLRISLKAQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGGAGTATTCCATTACATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGG
AGCTGGATACGGAGCGACCATCACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGA
ATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAG
TGTTTGATCGAGACATCTATAAATTCACTTCGCATCAGTCTCAAGGCACAAAGAGATGGGTACCTAAGTCCTGTGGACCATTTTAACTGCTTAAAGTGCTTCTTTGAATT
GGAGCTAGTGCTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCGGAGTATTCCATTACATGTTCAGCTTCAAGGAACGATCATCACAACCACGGGAGGACATTGTTCGGCTTCATACGTATGCATCTGTTGATCCTCGACGGGGCGG
AGCTGGATACGGAGCGACCATCACCTATTTGGATGGTATTATTTGTGGAGCTTTGGAGTTTAAGGACCCGACGCATCTTTCTCCTCTGGCAGCAGAAGTTAAATTCATGA
ATTTTCCTTGCCAAGAAGTTGAAAGACATAACAAGCCGGAGGTTGAACTGAAGACCAGCTCGGAACTTCTTCTCAATCCTATCTTAATCTGTCGAAATGAGTCAGAGAAG
TGTTTGATCGAGACATCTATAAATTCACTTCGCATCAGTCTCAAGGCACAAAGAGATGGGTACCTAAGTCCTGTGGACCATTTTAACTGCTTAAAGTGCTTCTTTGAATT
GGAGCTAGTGCTTTAG
Protein sequenceShow/hide protein sequence
MGGVFHYMFSFKERSSQPREDIVRLHTYASVDPRRGGAGYGATITYLDGIICGALEFKDPTHLSPLAAEVKFMNFPCQEVERHNKPEVELKTSSELLLNPILICRNESEK
CLIETSINSLRISLKAQRDGYLSPVDHFNCLKCFFELELVL