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Lag0016417 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016417
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionSmall EDRK-rich factor 2
Genome locationchr12:37528363..37531095
RNA-Seq ExpressionLag0016417
SyntenyLag0016417
Gene Ontology termsNA
InterPro domainsIPR007513 - Uncharacterised protein family SERF, N-terminal
IPR040211 - Small EDRK-rich factor 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0033303.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]5.8e-1790.48Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
        SLRGNQREKDRERAQARN GKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAA G NSSG +
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
KAF5726586.1 putative SERF-like protein [Tripterygium wilfordii]1.3e-1683.33Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
        SLRGNQREKDRERAQAR  GKGKNKDDGLTPEQRRERDAKALQEK AKKAAQAAGG N+ G + ++
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
KAG6593780.1 hypothetical protein SDJN03_13256, partial [Cucurbita argyrosperma subsp. sororia]2.6e-1786.36Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
        SLRGNQREKDRERAQARN GKGK+KDDGLT EQRRERDAKALQEKAAKKAAQA+GGDNSSG +  +
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
KAG7026110.1 hypothetical protein SDJN02_12609, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-1786.36Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
        SLRGNQREKDRERAQARN GKGK+KDDGLT EQRRERDAKALQEKAAKKAAQA+GGDNSSG +  +
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
TYK21602.1 small EDRK-rich factor 2 [Cucumis melo var. makuwa]5.8e-1790.48Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
        SLRGNQREKDRERAQARN GKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAA G NSSG +
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
TrEMBL top hitse value%identityAlignment
A0A5A7SS85 Small EDRK-rich factor 22.8e-1790.48Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
        SLRGNQREKDRERAQARN GKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAA G NSSG +
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
A0A5D3DDD9 Small EDRK-rich factor 22.8e-1790.48Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
        SLRGNQREKDRERAQARN GKGK KDDGLTPEQRRERDAKALQEKAAKKAAQAA G NSSG +
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAE
A0A6J1KLF6 small EDRK-rich factor 2-like1.4e-1685.94Show/hide
Query:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
        RGNQREKDRERAQARN GKGK+KDDGLT EQRRERDAKALQEKAAKKAAQA+GGDNSSG +  +
Subjt:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
A0A7J7BYG0 Putative SERF-like protein6.3e-1783.33Show/hide
Query:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
        SLRGNQREKDRERAQAR  GKGKNKDDGLTPEQRRERDAKALQEK AKKAAQAAGG N+ G + ++
Subjt:  SLRGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQD
A9PAB8 4F5 domain-containing protein2.4e-1691.53Show/hide
Query:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSG
        RGNQREKDRERAQARN GKGKNKDDGLTPEQRRERDAKALQEK AKKAAQAAGG++S G
Subjt:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G24100.1 Uncharacterised protein family SERF9.0e-1681.36Show/hide
Query:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSG
        RG+QRE+DRERA AR  GKGKNKDDGLTPEQRRERDAKALQEK AKKAAQAA   +S G
Subjt:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSG
AT4G13615.1 Uncharacterised protein family SERF4.5e-1578.33Show/hide
Query:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGA
        RG+QRE+DRERA AR  GKGKN DDGLTPEQRRERD KALQEKAAKKAAQAAG  +   A
Subjt:  RGNQREKDRERAQARNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGGGGTGTAACGCCCCAGGCCCAGGATTCGGAATTCGGCTTCGACACTTAAGGCCCCGACATTTCCGTGCGACCTGGCCACTTTACCATACTCGTCTTAAATT
GCTTCCAAGAGTGAAGACTGTCCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACCAACACGGGTCGCAGGGGAATACCGAGGCCGTTAAGAGTC
GAAGCCGGATTCCGAATCCTGGGCCTGGGGCGTTACAAGGGGATCAGAGATTGGAGAGAGGATCTCTACGCGGAAACCAGAGGGAGAAGGACCGAGAGAGGGCTCAGGCT
CGCAACCCTGGCAAGGGCAAGAACAAGGACGATGGTTTGACCCCCGAGCAGCGCCGTGAAAGGGATGCGAAGGCGCTGCAGGAGAAGGCGGCGAAGAAGGCGGCTCAGGC
GGCAGGGGGAGATAATTCGTCCGGAGCAGAAGAACAAGATAGTTTCATCAACAATATGAACATGGGTAACAATCCTTTCCTTCATAGAATCTCTCAACTAAACCTATGTC
TATATCGTAGGAACAATCTTGCCAAGGACGGACATTTACATCCAAAAGGCAAAGGAATGGAATTGGAGACAAAGGAACCACAACCTAATGTGCCTGGAAGCAAAGACTTC
GCCCTTAGGTTTACCATGGATAAGAAAAGAGAAATTCATCAATCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGGGGTGTAACGCCCCAGGCCCAGGATTCGGAATTCGGCTTCGACACTTAAGGCCCCGACATTTCCGTGCGACCTGGCCACTTTACCATACTCGTCTTAAATT
GCTTCCAAGAGTGAAGACTGTCCCCACAAACCAACACGGGGTCCTTTTAGCATGCTTTGTCCTCACTCACCAACACGGGTCGCAGGGGAATACCGAGGCCGTTAAGAGTC
GAAGCCGGATTCCGAATCCTGGGCCTGGGGCGTTACAAGGGGATCAGAGATTGGAGAGAGGATCTCTACGCGGAAACCAGAGGGAGAAGGACCGAGAGAGGGCTCAGGCT
CGCAACCCTGGCAAGGGCAAGAACAAGGACGATGGTTTGACCCCCGAGCAGCGCCGTGAAAGGGATGCGAAGGCGCTGCAGGAGAAGGCGGCGAAGAAGGCGGCTCAGGC
GGCAGGGGGAGATAATTCGTCCGGAGCAGAAGAACAAGATAGTTTCATCAACAATATGAACATGGGTAACAATCCTTTCCTTCATAGAATCTCTCAACTAAACCTATGTC
TATATCGTAGGAACAATCTTGCCAAGGACGGACATTTACATCCAAAAGGCAAAGGAATGGAATTGGAGACAAAGGAACCACAACCTAATGTGCCTGGAAGCAAAGACTTC
GCCCTTAGGTTTACCATGGATAAGAAAAGAGAAATTCATCAATCTTAA
Protein sequenceShow/hide protein sequence
MEEGCNAPGPGFGIRLRHLRPRHFRATWPLYHTRLKLLPRVKTVPTNQHGVLLACFVLTHQHGSQGNTEAVKSRSRIPNPGPGALQGDQRLERGSLRGNQREKDRERAQA
RNPGKGKNKDDGLTPEQRRERDAKALQEKAAKKAAQAAGGDNSSGAEEQDSFINNMNMGNNPFLHRISQLNLCLYRRNNLAKDGHLHPKGKGMELETKEPQPNVPGSKDF
ALRFTMDKKREIHQS