; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016445 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016445
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr12:37862859..37863674
RNA-Seq ExpressionLag0016445
SyntenyLag0016445
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4351405.1 hypothetical protein F8388_001025, partial [Cannabis sativa]2.1e-3945.69Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R  SW L+ RL    D  W+ GGD NEIL  NEK GG DR +  I DF++ALD C L D+GF G  FTW N+R     V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRR-RKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW
        +  NQ + +LF  ++VVN D+  SDH+PI   L    +V NR+  K  +F+FE  W    ECRDI+++T    + P DN  S+     +CA  L  W
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRR-RKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW

KAF4372682.1 hypothetical protein F8388_000849, partial [Cannabis sativa]2.1e-3943.37Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R +SW L+ RL    D  W+ GGD NE+L  NEK GG DR +  I DF++ALD C L D+GF G  FTW N+R     V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW
        +  NQ++ +LF  ++V+N D+  SDH+PI  ++L + + + +  K  +F+FE  W    ECRDI+++T    + P DN  S+     +CA  L  W
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW

KAF4381998.1 hypothetical protein G4B88_006630 [Cannabis sativa]1.8e-3842.4Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R  SW L+ RL D  D  W+ GGD NEIL  NEK GGSDR +  + +F+ ALD C L DLGF G  FTW N+R  G  V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF
        +  NQ +  LF  ++V+N D+  SDH+PI  +L     V+ R+R  K   F+FE  W    EC++II+R+    + P  N  SL      CA  L  W  
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF

Query:  NQNLRLRNEIKEIKSKI
        ++   L  +++E + ++
Subjt:  NQNLRLRNEIKEIKSKI

KAF4383622.1 hypothetical protein F8388_014122 [Cannabis sativa]4.6e-4240.56Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R  SW L+ RL D  D  W+ GGD NEIL  NEK GGSDR +  + +F+ ALD C L DLGF G  FTW N+R  G  V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF
        +  NQ +  LF  ++V+N D+  SDH+PI  +L     V+ R+R  K   F+FE  W    EC++II+R+    + P  N  SL      CA  L  W  
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF

Query:  NQNLRLRNEIKEIKSKIKVSYERRGP-IDFDEIHGLERQLDNLLLEEEC
        ++   L  +++E + ++        P +  +E+  +E +L++LL  EEC
Subjt:  NQNLRLRNEIKEIKSKIKVSYERRGP-IDFDEIHGLERQLDNLLLEEEC

XP_023879274.1 uncharacterized protein LOC111991717 [Quercus suber]3.1e-3839.59Show/hide
Query:  WRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSL-RLDR
        WR TG YG+PD++ R  SW L+  L    D  WV+ GD NEI    EK GG++R+  Q+E FR ALD+C LRDLGF G  FTWCN R  GDQ +L RLDR
Subjt:  WRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSL-RLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNLSLQQTLEQCAIALKGWGFNQN
         VAN  + +LF+  +V ++  + SDH  + L L        RRR    F+FE  W   V CRD++           D  S Q  +  C   L+ WG N  
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNLSLQQTLEQCAIALKGWGFNQN

Query:  LRLRNEIKEIKSKIKVSYERRGPIDFD--EIHGLERQLDNLLLEE
          L+ +I E ++ ++   E R  +  D   I  L R+++ LL  E
Subjt:  LRLRNEIKEIKSKIKVSYERRGPIDFD--EIHGLERQLDNLLLEE

TrEMBL top hitse value%identityAlignment
A0A2N9HB41 Uncharacterized protein8.8e-3936.65Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YG+P+++LRH SW+L+RRL+  N+  W++ GD NEI+   EK G  DR  +Q+  FREAL DC L DLGF G  FTW N R   D V +RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNLSLQQTLEQCAIALKGWGFNQ-
         VA+Q + +LF +  V +   A SDH  + L  L   ++  R++KN  F+F+  W    +C ++I+              L Q ++QC I L  W  +Q 
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNLSLQQTLEQCAIALKGWGFNQ-

Query:  -----NLR-LRNEIKEIKSKIKVSYERRGPIDFDEIHGLERQLDNLLLEEE
             N+   + +++E++ +    Y+ R      E++ + R+L  L+ +EE
Subjt:  -----NLR-LRNEIKEIKSKIKVSYERRGPIDFDEIHGLERQLDNLLLEEE

A0A7J6DZ24 CCHC-type domain-containing protein1.0e-3945.69Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R  SW L+ RL    D  W+ GGD NEIL  NEK GG DR +  I DF++ALD C L D+GF G  FTW N+R     V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRR-RKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW
        +  NQ + +LF  ++VVN D+  SDH+PI   L    +V NR+  K  +F+FE  W    ECRDI+++T    + P DN  S+     +CA  L  W
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRR-RKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW

A0A7J6FPV7 CCHC-type domain-containing protein1.0e-3943.37Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R +SW L+ RL    D  W+ GGD NE+L  NEK GG DR +  I DF++ALD C L D+GF G  FTW N+R     V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW
        +  NQ++ +LF  ++V+N D+  SDH+PI  ++L + + + +  K  +F+FE  W    ECRDI+++T    + P DN  S+     +CA  L  W
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGW

A0A7J6GGL8 CCHC-type domain-containing protein8.8e-3942.4Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R  SW L+ RL D  D  W+ GGD NEIL  NEK GGSDR +  + +F+ ALD C L DLGF G  FTW N+R  G  V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF
        +  NQ +  LF  ++V+N D+  SDH+PI  +L     V+ R+R  K   F+FE  W    EC++II+R+    + P  N  SL      CA  L  W  
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF

Query:  NQNLRLRNEIKEIKSKI
        ++   L  +++E + ++
Subjt:  NQNLRLRNEIKEIKSKI

A0A7J6GL46 CCHC-type domain-containing protein2.2e-4240.56Show/hide
Query:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR
        +WRFTG YGNP +S R  SW L+ RL D  D  W+ GGD NEIL  NEK GGSDR +  + +F+ ALD C L DLGF G  FTW N+R  G  V  RLDR
Subjt:  MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDR

Query:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF
        +  NQ +  LF  ++V+N D+  SDH+PI  +L     V+ R+R  K   F+FE  W    EC++II+R+    + P  N  SL      CA  L  W  
Subjt:  FVANQNFCSLFEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRR--KNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNL-SLQQTLEQCAIALKGWGF

Query:  NQNLRLRNEIKEIKSKIKVSYERRGP-IDFDEIHGLERQLDNLLLEEEC
        ++   L  +++E + ++        P +  +E+  +E +L++LL  EEC
Subjt:  NQNLRLRNEIKEIKSKIKVSYERRGP-IDFDEIHGLERQLDNLLLEEEC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGTTTACTGGTATGTATGGAAATCCCGACTCCTCACTTCGTCATCATTCATGGAATTTAATCAGACGTTTGTATGATTTTAACGATAATGCTTGGGTGATTGG
GGGTGATTTAAATGAAATTTTATGGCAAAATGAAAAAATGGGTGGATCTGATAGGGATATCCAACAAATAGAAGATTTTAGAGAAGCCTTGGATGATTGTAAGCTCAGGG
ATCTGGGCTTTTCTGGGGGAGTTTTTACATGGTGTAACCGCAGAAGTTTGGGCGATCAAGTAAGTCTGAGACTTGATCGTTTTGTTGCTAATCAAAATTTTTGCTCCCTT
TTTGAGGATCTCCAAGTTGTTAATAAGGACTGGGCGAAATCAGATCACAAACCTATAGAGCTCAGTTTGCTGGGGAGTGGTATAGTTGCAAATAGGAGAAGGAAAAATTG
GAATTTTAAATTTGAGGAGTGGTGGACTGGACATGTGGAATGTCGTGATATTATCAGCCGGACTGGGAAATGGAGAGAGGGACCTGATGACAATCTGTCGCTGCAGCAGA
CGTTGGAACAATGTGCCATTGCCCTTAAAGGATGGGGGTTTAATCAGAATTTGAGGTTGAGAAATGAGATTAAGGAGATCAAGAGCAAAATTAAGGTCTCTTATGAGCGT
CGTGGACCTATTGATTTTGATGAGATTCATGGTTTGGAGCGGCAACTTGACAATTTGTTGTTGGAGGAAGAATGTACTGGAAACAGCGGTCAAGGGAGAATTGGCTTAAA
TGGGGAGACCGCAATACGAAGTGGTTCCATCAAAAGGCGACCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGCGGTTTACTGGTATGTATGGAAATCCCGACTCCTCACTTCGTCATCATTCATGGAATTTAATCAGACGTTTGTATGATTTTAACGATAATGCTTGGGTGATTGG
GGGTGATTTAAATGAAATTTTATGGCAAAATGAAAAAATGGGTGGATCTGATAGGGATATCCAACAAATAGAAGATTTTAGAGAAGCCTTGGATGATTGTAAGCTCAGGG
ATCTGGGCTTTTCTGGGGGAGTTTTTACATGGTGTAACCGCAGAAGTTTGGGCGATCAAGTAAGTCTGAGACTTGATCGTTTTGTTGCTAATCAAAATTTTTGCTCCCTT
TTTGAGGATCTCCAAGTTGTTAATAAGGACTGGGCGAAATCAGATCACAAACCTATAGAGCTCAGTTTGCTGGGGAGTGGTATAGTTGCAAATAGGAGAAGGAAAAATTG
GAATTTTAAATTTGAGGAGTGGTGGACTGGACATGTGGAATGTCGTGATATTATCAGCCGGACTGGGAAATGGAGAGAGGGACCTGATGACAATCTGTCGCTGCAGCAGA
CGTTGGAACAATGTGCCATTGCCCTTAAAGGATGGGGGTTTAATCAGAATTTGAGGTTGAGAAATGAGATTAAGGAGATCAAGAGCAAAATTAAGGTCTCTTATGAGCGT
CGTGGACCTATTGATTTTGATGAGATTCATGGTTTGGAGCGGCAACTTGACAATTTGTTGTTGGAGGAAGAATGTACTGGAAACAGCGGTCAAGGGAGAATTGGCTTAAA
TGGGGAGACCGCAATACGAAGTGGTTCCATCAAAAGGCGACCATGA
Protein sequenceShow/hide protein sequence
MWRFTGMYGNPDSSLRHHSWNLIRRLYDFNDNAWVIGGDLNEILWQNEKMGGSDRDIQQIEDFREALDDCKLRDLGFSGGVFTWCNRRSLGDQVSLRLDRFVANQNFCSL
FEDLQVVNKDWAKSDHKPIELSLLGSGIVANRRRKNWNFKFEEWWTGHVECRDIISRTGKWREGPDDNLSLQQTLEQCAIALKGWGFNQNLRLRNEIKEIKSKIKVSYER
RGPIDFDEIHGLERQLDNLLLEEECTGNSGQGRIGLNGETAIRSGSIKRRP