; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016448 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016448
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:37879079..37879919
RNA-Seq ExpressionLag0016448
SyntenyLag0016448
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015386823.1 uncharacterized protein LOC107177480 [Citrus sinensis]3.3e-0745.83Show/hide
Query:  SVWSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAE
        S   R KP   LLTVKQ   E+L+DYI ++ NE++QV+G+DDG++L  ++ GL+ G+L  S SK  P   +E
Subjt:  SVWSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAE

XP_022147761.1 uncharacterized protein LOC111016619 [Momordica charantia]6.2e-0636.21Show/hide
Query:  WSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVR---NKKSDSTGCKPNEVP
        W+R +P   LLT+KQ   ESLKDY+ RF  E LQVEG  D V L   I G++D +L+ S  K +    +EA  R +++  V    + K D  G   +   
Subjt:  WSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVR---NKKSDSTGCKPNEVP

Query:  RKIEVGPRRE--EWEQ
        ++   G +R    WE+
Subjt:  RKIEVGPRRE--EWEQ

XP_022158344.1 uncharacterized protein LOC111024851 [Momordica charantia]4.7e-0646.05Show/hide
Query:  RHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSH
        + KP   LLT+KQ   ESLK+Y+ RF  E LQVEG  D VAL A + G++D RL+ S  K +P    EA  R + +
Subjt:  RHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSH

XP_024041095.1 uncharacterized protein LOC112098853 [Citrus clementina]1.1e-0748.61Show/hide
Query:  SVWSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAE
        S   R KP   LLTVKQ   E+L+DYI R+ NE+ QV+G+DDG+AL+ ++ GL+ G+L  S SK  P   +E
Subjt:  SVWSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAE

XP_024047974.1 uncharacterized protein LOC112101548 [Citrus clementina]5.6e-0740.21Show/hide
Query:  SVWSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVRNKKSDSTGCKPNE
        S   R KP   LLTVKQ   ESL++YI R+  E  QV+G+DDGVAL+ ++ GLQ GRL  S +K+ P   +E   R   +     +     G +  E
Subjt:  SVWSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVRNKKSDSTGCKPNE

TrEMBL top hitse value%identityAlignment
A0A2N9FPT8 Reverse transcriptase domain-containing protein2.3e-0644.44Show/hide
Query:  KPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVRNKK
        +P   LL V+Q   E+L+ Y+ RF  E L V+G DD V LTA I GLQ G  L S  KD P  M+E  KR   +R   N++
Subjt:  KPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVRNKK

A0A2N9FRK4 Ribonuclease H3.9e-0650Show/hide
Query:  KPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAE
        +P   LL VKQ   E+L+ Y+ RF  E L V+G DD V LTA I GLQ G  L S  KD P  M+E
Subjt:  KPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAE

A0A2N9IQQ3 Reverse transcriptase2.3e-0645.95Show/hide
Query:  KPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSH
        +P   LL +KQ  RE+L+ Y+ RF  E L V+G DD V LTA I GLQ G  L S  KD P  M E     + H
Subjt:  KPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSH

A0A6J1D3B7 uncharacterized protein LOC1110166193.0e-0636.21Show/hide
Query:  WSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVR---NKKSDSTGCKPNEVP
        W+R +P   LLT+KQ   ESLKDY+ RF  E LQVEG  D V L   I G++D +L+ S  K +    +EA  R +++  V    + K D  G   +   
Subjt:  WSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSHRVVR---NKKSDSTGCKPNEVP

Query:  RKIEVGPRRE--EWEQ
        ++   G +R    WE+
Subjt:  RKIEVGPRRE--EWEQ

A0A6J1DZ49 uncharacterized protein LOC1110248512.3e-0646.05Show/hide
Query:  RHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSH
        + KP   LLT+KQ   ESLK+Y+ RF  E LQVEG  D VAL A + G++D RL+ S  K +P    EA  R + +
Subjt:  RHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKRPRSH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCCCATATCCGACATGAGCACTCTTCGGTCGATGGCCGAGGCCGAGCAGAAGCCCAATCACAAAAAGGCCCGCAAAAGTTCGCCGCTAAAGACAACGTCAGTCTG
GAGCCGACATAAGCCTCAGATCAAGTTGCTGACAGTAAAGCAGGGGCCTCGAGAAAGCTTGAAGGATTATATTAACAGATTTTGTAACGAAGTTTTGCAGGTAGAAGGCC
ATGACGATGGAGTTGCCTTGACTGCTATGATTTTAGGTCTACAGGATGGAAGACTACTCAGCTCAGCCAGCAAGGACAGTCCTCGGCCAATGGCCGAGGCCGGAAAGAGG
CCAAGGAGCCACAGGGTTGTGCGGAACAAAAAGTCAGATTCGACAGGATGCAAACCTAATGAAGTGCCCAGAAAAATTGAGGTCGGACCCAGACGGGAGGAATGGGAACA
AGTGATGCATGTTCCACGGAGACCACGGTCATACAACTCGGAAATGCATACAGTTGAGAGACGAGATAGAAGCCCTAACCTGAAAGGGTTACCTCAAGGAGTTTGTGGGA
AATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCCCATATCCGACATGAGCACTCTTCGGTCGATGGCCGAGGCCGAGCAGAAGCCCAATCACAAAAAGGCCCGCAAAAGTTCGCCGCTAAAGACAACGTCAGTCTG
GAGCCGACATAAGCCTCAGATCAAGTTGCTGACAGTAAAGCAGGGGCCTCGAGAAAGCTTGAAGGATTATATTAACAGATTTTGTAACGAAGTTTTGCAGGTAGAAGGCC
ATGACGATGGAGTTGCCTTGACTGCTATGATTTTAGGTCTACAGGATGGAAGACTACTCAGCTCAGCCAGCAAGGACAGTCCTCGGCCAATGGCCGAGGCCGGAAAGAGG
CCAAGGAGCCACAGGGTTGTGCGGAACAAAAAGTCAGATTCGACAGGATGCAAACCTAATGAAGTGCCCAGAAAAATTGAGGTCGGACCCAGACGGGAGGAATGGGAACA
AGTGATGCATGTTCCACGGAGACCACGGTCATACAACTCGGAAATGCATACAGTTGAGAGACGAGATAGAAGCCCTAACCTGAAAGGGTTACCTCAAGGAGTTTGTGGGA
AATGA
Protein sequenceShow/hide protein sequence
MEPISDMSTLRSMAEAEQKPNHKKARKSSPLKTTSVWSRHKPQIKLLTVKQGPRESLKDYINRFCNEVLQVEGHDDGVALTAMILGLQDGRLLSSASKDSPRPMAEAGKR
PRSHRVVRNKKSDSTGCKPNEVPRKIEVGPRREEWEQVMHVPRRPRSYNSEMHTVERRDRSPNLKGLPQGVCGK