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Lag0016460 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016460
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionS-protein homolog
Genome locationchr12:38003811..38004227
RNA-Seq ExpressionLag0016460
SyntenyLag0016460
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0059530.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]2.0e-3367.31Show/hide
Query:  SLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVE
        +L+T EG+ +  P+V+VNITNAL + +QLTVHCKSADDDLGV QL  L  YAF FRPNF  TTLF+C FQW G S+ FDIYKDSRDRDRC  LCLW+V E
Subjt:  SLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVE

Query:  KGLC
        +G+C
Subjt:  KGLC

KGN61530.1 hypothetical protein Csa_006387 [Cucumis sativus]5.6e-4461.43Show/hide
Query:  MGSFSTLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIY
        M SFST  LSL +S +FA+++TIEG+ +  P V+VNITNAL++ +NQLT+HCKS DDDLGV QL +L SYAF FRPNF+ +TLF+C F W GSSHYF+IY
Subjt:  MGSFSTLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIY

Query:  KDSRDRDRCRG-LCLWVVVEKGLCLFNYGTQKYDLCYAWA
        +D RDR +C   LCLW+V E+GLC+F+Y T  YD+CY W+
Subjt:  KDSRDRDRCRG-LCLWVVVEKGLCLFNYGTQKYDLCYAWA

XP_008460739.1 PREDICTED: uncharacterized protein LOC103499501 [Cucumis melo]2.1e-3564.49Show/hide
Query:  VSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRC-RGLCLWVVVEKGLCLFNYGTQK
        ++VNITN +   +NQLTVHCKS DDDLGV +LP+L+SY F FRPNF+ +TLF+C FQW    HYFDIYKDSRD  RC + LCLW++ EKG+C+FNY T+ 
Subjt:  VSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRC-RGLCLWVVVEKGLCLFNYGTQK

Query:  YDLCYAW
        YD CYAW
Subjt:  YDLCYAW

XP_008465559.1 PREDICTED: pumilio homolog 15-like, partial [Cucumis melo]1.6e-4368.64Show/hide
Query:  LYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEK
        L+TIEG+ +  P+V+VNITNAL + +QLTVHCKS DDDLG+ QL  L  YAF FRPNF  TTLF+C FQWPG SH FDIYKDSRDRDRC GLCLW+V E+
Subjt:  LYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEK

Query:  GLCLFNYGTQKYDLCYAW
        G+C+F+Y T+KYD CY W
Subjt:  GLCLFNYGTQKYDLCYAW

XP_022138779.1 S-protein homolog 5 [Momordica charantia]8.7e-3759.09Show/hide
Query:  TLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR
        +L+  +L S+I  ++  +  R       SVNITN L++H QLTVHCKS DDDLG  QLP LISYAF FRPN + +TLFFC+FQWPGS HYF+IY   RD 
Subjt:  TLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR

Query:  DRCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW
        D C  LCLW+V EKGLCL+N  T KYD+CY W
Subjt:  DRCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW

TrEMBL top hitse value%identityAlignment
A0A0A0LI28 S-protein homolog2.7e-4461.43Show/hide
Query:  MGSFSTLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIY
        M SFST  LSL +S +FA+++TIEG+ +  P V+VNITNAL++ +NQLT+HCKS DDDLGV QL +L SYAF FRPNF+ +TLF+C F W GSSHYF+IY
Subjt:  MGSFSTLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIY

Query:  KDSRDRDRCRG-LCLWVVVEKGLCLFNYGTQKYDLCYAWA
        +D RDR +C   LCLW+V E+GLC+F+Y T  YD+CY W+
Subjt:  KDSRDRDRCRG-LCLWVVVEKGLCLFNYGTQKYDLCYAWA

A0A1S3CDK4 S-protein homolog1.0e-3564.49Show/hide
Query:  VSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRC-RGLCLWVVVEKGLCLFNYGTQK
        ++VNITN +   +NQLTVHCKS DDDLGV +LP+L+SY F FRPNF+ +TLF+C FQW    HYFDIYKDSRD  RC + LCLW++ EKG+C+FNY T+ 
Subjt:  VSVNITNALQN-HNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRC-RGLCLWVVVEKGLCLFNYGTQK

Query:  YDLCYAW
        YD CYAW
Subjt:  YDLCYAW

A0A1S3CP53 S-protein homolog7.9e-4468.64Show/hide
Query:  LYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEK
        L+TIEG+ +  P+V+VNITNAL + +QLTVHCKS DDDLG+ QL  L  YAF FRPNF  TTLF+C FQWPG SH FDIYKDSRDRDRC GLCLW+V E+
Subjt:  LYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEK

Query:  GLCLFNYGTQKYDLCYAW
        G+C+F+Y T+KYD CY W
Subjt:  GLCLFNYGTQKYDLCYAW

A0A5A7UWN1 S-protein homolog9.7e-3467.31Show/hide
Query:  SLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVE
        +L+T EG+ +  P+V+VNITNAL + +QLTVHCKSADDDLGV QL  L  YAF FRPNF  TTLF+C FQW G S+ FDIYKDSRDRDRC  LCLW+V E
Subjt:  SLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVE

Query:  KGLC
        +G+C
Subjt:  KGLC

A0A6J1CB24 S-protein homolog4.2e-3759.09Show/hide
Query:  TLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR
        +L+  +L S+I  ++  +  R       SVNITN L++H QLTVHCKS DDDLG  QLP LISYAF FRPN + +TLFFC+FQWPGS HYF+IY   RD 
Subjt:  TLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR

Query:  DRCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW
        D C  LCLW+V EKGLCL+N  T KYD+CY W
Subjt:  DRCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 24.8e-2247.22Show/hide
Query:  SVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR---DRCRG-LCLWVVVEKGLCLFNYGTQ
        +V I N L N   L  HCKS DDDLG + L    S++F F   FF  TL+FC+F WP  SH FDIYKD RD    ++C    C+W +   G C FN  T+
Subjt:  SVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR---DRCRG-LCLWVVVEKGLCLFNYGTQ

Query:  KYDLCYAW
        ++DLCY W
Subjt:  KYDLCYAW

F4JZG1 S-protein homolog 43.8e-1945.37Show/hide
Query:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFF-ATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGL----CLWVVVEKGLCLFNYGTQ
        V ITN L + + L +HCKSADDDLG++ L    S++FKFRP+     TLFFC+F WPG S +F+IY D RD  R  G+    C+W + + G C F+    
Subjt:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFF-ATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGL----CLWVVVEKGLCLFNYGTQ

Query:  KYDLCYAW
         +++CY W
Subjt:  KYDLCYAW

O23020 S-protein homolog 51.5e-1542.86Show/hide
Query:  LTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW
        LT+HCKS  DDLG+  +P+   Y FKF+PN + +TLFFC+FQW      FDIY   RD+  C   C W +   G C       K   C+ W
Subjt:  LTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW

P0DN93 S-protein homolog 296.1e-1737.86Show/hide
Query:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEKGLCLFNYGTQKYDLC
        V +TN +     LT+ C+S DDDLG   L +  ++ +KFRP++F TTLF C F W  +  +FD Y+  RD+  C   C W +     C+     +K+D C
Subjt:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGLCLWVVVEKGLCLFNYGTQKYDLC

Query:  YAW
        Y W
Subjt:  YAW

Q9FMQ4 S-protein homolog 32.0e-2045.79Show/hide
Query:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDR----CRGLCLWVVVEKGLCLFNYGTQK
        V ITN L +   L +HCKSADDDLG++ L    S++FKFR +   TTLF+C+F WPG S  FDIY D RD  R    C   C+W +  +G C+F+     
Subjt:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDR----CRGLCLWVVVEKGLCLFNYGTQK

Query:  YDLCYAW
        +++CY W
Subjt:  YDLCYAW

Arabidopsis top hitse value%identityAlignment
AT3G16970.1 Plant self-incompatibility protein S1 family3.5e-2041.23Show/hide
Query:  YNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRD----RCRGLCLWVVVEKGLCL
        ++ P  +V I N L  H  L  HCKS +DDLG + +    +++F+FRP+ F  TLFFC F W    H+FDIYK SRDR+     CR  C W + + G C 
Subjt:  YNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRD----RCRGLCLWVVVEKGLCL

Query:  FNYGTQKYDLCYAW
         N  +  +D+C  W
Subjt:  FNYGTQKYDLCYAW

AT3G17080.1 Plant self-incompatibility protein S1 family8.7e-1939.01Show/hide
Query:  MGSFSTLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYK
        MGS  T  L  +M    ++       I +    SV I N L     L  HCKS +DDLG Q L    S++F F P+ F  TLF+C F W   SH FDIYK
Subjt:  MGSFSTLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYK

Query:  DSRDRD----RCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW
         SRD++     C+  C W + + G C F   T  +D CY+W
Subjt:  DSRDRD----RCRGLCLWVVVEKGLCLFNYGTQKYDLCYAW

AT4G16195.1 Plant self-incompatibility protein S1 family3.4e-2347.22Show/hide
Query:  SVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR---DRCRG-LCLWVVVEKGLCLFNYGTQ
        +V I N L N   L  HCKS DDDLG + L    S++F F   FF  TL+FC+F WP  SH FDIYKD RD    ++C    C+W +   G C FN  T+
Subjt:  SVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDR---DRCRG-LCLWVVVEKGLCLFNYGTQ

Query:  KYDLCYAW
        ++DLCY W
Subjt:  KYDLCYAW

AT5G12060.1 Plant self-incompatibility protein S1 family1.4e-2145.79Show/hide
Query:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDR----CRGLCLWVVVEKGLCLFNYGTQK
        V ITN L +   L +HCKSADDDLG++ L    S++FKFR +   TTLF+C+F WPG S  FDIY D RD  R    C   C+W +  +G C+F+     
Subjt:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDR----CRGLCLWVVVEKGLCLFNYGTQK

Query:  YDLCYAW
        +++CY W
Subjt:  YDLCYAW

AT5G12070.1 Plant self-incompatibility protein S1 family2.7e-2045.37Show/hide
Query:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFF-ATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGL----CLWVVVEKGLCLFNYGTQ
        V ITN L + + L +HCKSADDDLG++ L    S++FKFRP+     TLFFC+F WPG S +F+IY D RD  R  G+    C+W + + G C F+    
Subjt:  VNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFF-ATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRGL----CLWVVVEKGLCLFNYGTQ

Query:  KYDLCYAW
         +++CY W
Subjt:  KYDLCYAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCGTTTTCAACACTTGCACTATCTTTGCTAATGTCGTCGATTTTTGCTAGCCTATACACCATCGAAGGAAGAATCTACAATGTCCCAATGGTTTCAGTCAACAT
AACAAATGCTCTGCAAAATCACAATCAGCTGACTGTCCACTGCAAATCCGCCGATGACGATCTGGGAGTCCAACAACTGCCATATTTGATCAGCTACGCCTTCAAATTTC
GACCAAACTTCTTTGCTACAACTTTATTCTTTTGCAACTTTCAATGGCCTGGCTCATCTCATTACTTTGATATCTACAAGGACTCCAGAGACAGAGATCGTTGCAGGGGC
CTGTGTTTGTGGGTTGTGGTTGAAAAGGGTCTATGTTTATTCAACTATGGCACCCAGAAGTATGATCTTTGCTATGCGTGGGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCGTTTTCAACACTTGCACTATCTTTGCTAATGTCGTCGATTTTTGCTAGCCTATACACCATCGAAGGAAGAATCTACAATGTCCCAATGGTTTCAGTCAACAT
AACAAATGCTCTGCAAAATCACAATCAGCTGACTGTCCACTGCAAATCCGCCGATGACGATCTGGGAGTCCAACAACTGCCATATTTGATCAGCTACGCCTTCAAATTTC
GACCAAACTTCTTTGCTACAACTTTATTCTTTTGCAACTTTCAATGGCCTGGCTCATCTCATTACTTTGATATCTACAAGGACTCCAGAGACAGAGATCGTTGCAGGGGC
CTGTGTTTGTGGGTTGTGGTTGAAAAGGGTCTATGTTTATTCAACTATGGCACCCAGAAGTATGATCTTTGCTATGCGTGGGCCTAA
Protein sequenceShow/hide protein sequence
MGSFSTLALSLLMSSIFASLYTIEGRIYNVPMVSVNITNALQNHNQLTVHCKSADDDLGVQQLPYLISYAFKFRPNFFATTLFFCNFQWPGSSHYFDIYKDSRDRDRCRG
LCLWVVVEKGLCLFNYGTQKYDLCYAWA