; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016503 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016503
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionheterogeneous nuclear ribonucleoprotein 1-like
Genome locationchr12:38429212..38429676
RNA-Seq ExpressionLag0016503
SyntenyLag0016503
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574899.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]6.2e-6095.24Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAG GGPGSAPTGHSPGGAAGYGNQGYGYGG GNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGE+QGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQ QQQ
Subjt:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
KAG7013472.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.1e-6095.92Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGG GNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGE+QGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQ QQQ
Subjt:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
XP_022959237.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita moschata]2.1e-6095.92Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGG GNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGE+QGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQ QQQ
Subjt:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
XP_023000503.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita maxima]1.6e-6095.21Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGELQGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYM +GYGDANGNTGYGNA WRSDGGQVGYTGGY GGQARQ QQQ
Subjt:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
XP_023548146.1 heterogeneous nuclear ribonucleoprotein 1-like [Cucurbita pepo subsp. pepo]6.2e-6095.24Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGG GNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGE+QGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYMGNGYGDANG N+GYGNAAWRSDGGQVGYTGGYAGGQARQ QQQ
Subjt:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
TrEMBL top hitse value%identityAlignment
A0A6J1CDB1 heterogeneous nuclear ribonucleoprotein 1-like3.9e-6095.21Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGA G NAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYG AGGRSG+ASNSNVGGGPSGGELQGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYMGNGYGDANGN+GYGNAAWRSDGGQVGYTGGYA GQARQ QQQ
Subjt:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
A0A6J1H3Z2 heterogeneous nuclear ribonucleoprotein 1-like1.0e-6095.92Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGG GNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGE+QGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQ QQQ
Subjt:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
A0A6J1HK79 heterogeneous nuclear ribonucleoprotein 1-like1.5e-5993.84Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGELQGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYM +GYGDANGNTGYGNA WRSDGGQVGYTGGY G QAR  QQQ
Subjt:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
A0A6J1KMT7 heterogeneous nuclear ribonucleoprotein 1-like7.9e-6195.21Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGT GGRSG+ASNSNVGGGPSGGELQGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYM +GYGDANGNTGYGNA WRSDGGQVGYTGGY GGQARQ QQQ
Subjt:  GGYMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
A0A6J1KWS0 heterogeneous nuclear ribonucleoprotein 1-like1.1e-5995.24Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGG GNQGYGYGGGDGSYGSQSGYG  GGRSG+ASNSNVGG PSGGELQGNS
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
        GGYMGNGYGDANG NTGYGNAAWRSDGGQVGYTGGYAGGQARQ QQQ
Subjt:  GGYMGNGYGDANG-NTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
SwissProt top hitse value%identityAlignment
Q8W034 Heterogeneous nuclear ribonucleoprotein 13.7e-0745.71Show/hide
Query:  GYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNSGGYM
        GYGN     G   G A +G G PG+AP   SP   +GY NQGYGYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYM
Subjt:  GYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNSGGYM

Query:  GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQ
        G GYGD          +WRSD  Q GY GGY  GQ RQGQ
Subjt:  GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQ
Arabidopsis top hitse value%identityAlignment
AT2G33410.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.7e-1146.94Show/hide
Query:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS
        YG +GYGNAAPWG         GSGGPGSA  G + G +AGY          G+QGYGYGG D SYG+ S YG  GGRSG   N++ GG           
Subjt:  YGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNS

Query:  GGYMGNGYGDA-NGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
              GY DA +G+ GYGN   + + GQ GY GGY  G  RQ QQQ
Subjt:  GGYMGNGYGDA-NGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ
AT4G14300.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.6e-0845.71Show/hide
Query:  GYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNSGGYM
        GYGN     G   G A +G G PG+AP   SP   +GY NQGYGYG       GY G D  YG+Q+ YG  GGR     ++N G           SGGYM
Subjt:  GYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNSGGYM

Query:  GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQ
        G GYGD          +WRSD  Q GY GGY  GQ RQGQ
Subjt:  GNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAGCTCAAGCTCCATCTGGTATGGGGCCATGGGTTATGGGAATGCAGCTCCTTGGGGTGGTGCTCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGACCTGGATC
TGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGT
ATGGTAGTCAATCTGGTTACGGTACAGCCGGAGGACGTTCTGGTACTGCCTCAAATAGCAATGTTGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGT
TACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACTGGTGGCTATGCTGGTGGACA
AGCTCGACAAGGCCAACAACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAGCTCAAGCTCCATCTGGTATGGGGCCATGGGTTATGGGAATGCAGCTCCTTGGGGTGGTGCTCCTGGGGGCAATGCTGGAGCTGGCAGTGGTGGACCTGGATC
TGCACCCACAGGTCATTCTCCTGGTGGAGCTGCTGGGTATGGCAATCAGGGTTATGGATATGGTGGGTTTGGGAATCAAGGTTATGGTTATGGTGGAGGTGATGGCTCGT
ATGGTAGTCAATCTGGTTACGGTACAGCCGGAGGACGTTCTGGTACTGCCTCAAATAGCAATGTTGGGGGTGGTCCAAGTGGGGGAGAATTACAAGGGAACAGTGGTGGT
TACATGGGTAATGGCTATGGGGATGCTAATGGAAACACTGGTTATGGAAATGCTGCATGGAGATCTGATGGAGGACAAGTAGGTTATACTGGTGGCTATGCTGGTGGACA
AGCTCGACAAGGCCAACAACAGTAA
Protein sequenceShow/hide protein sequence
MVSSSSIWYGAMGYGNAAPWGGAPGGNAGAGSGGPGSAPTGHSPGGAAGYGNQGYGYGGFGNQGYGYGGGDGSYGSQSGYGTAGGRSGTASNSNVGGGPSGGELQGNSGG
YMGNGYGDANGNTGYGNAAWRSDGGQVGYTGGYAGGQARQGQQQ