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Lag0016510 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016510
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr12:38498979..38499875
RNA-Seq ExpressionLag0016510
SyntenyLag0016510
Gene Ontology termsNA
InterPro domainsIPR036691 - Endonuclease/exonuclease/phosphatase superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF5449841.1 hypothetical protein F2P56_030246 [Juglans regia]1.3e-3245.52Show/hide
Query:  FVDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSI-QCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAK
        FVD  GRSGGL+LLW   +S ++ SFS  HID  ++ + + + R + +YGHP A  + +TW L++ L  + + PW VGGD N +L+ HEK  GR  P A+
Subjt:  FVDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSI-QCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAK

Query:  LNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
        L  FR  +++C+L +LGF+G +FTWCN R   + + ER+DR FGN
Subjt:  LNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

KAF5471209.1 hypothetical protein F2P56_011662 [Juglans regia]5.8e-3043.15Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ---CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA
        + S GR GG+ALLWD+ +  ++I++S NH+D  ++ + ++     L+ IYG P+   +  +W L+K L R+   PW V GD N IL  HEK  G  +PE 
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ---CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA

Query:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
        +L  FR+ VD C L +LG+ G KFTW NRR  D+ + ER+DRC  N
Subjt:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

XP_018812547.1 uncharacterized protein LOC108984903 [Juglans regia]5.8e-3043.15Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ---CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA
        + S GR GG+ALLWD+ +  ++I++S NH+D  ++ + ++     L+ IYG P+   +  +W L+K L R+   PW V GD N IL  HEK  G  +PE 
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ---CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA

Query:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
        +L  FR+ VD C L +LG+ G KFTW NRR  D+ + ER+DRC  N
Subjt:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

XP_042980077.1 uncharacterized protein LOC122310261 [Carya illinoinensis]1.2e-3044.44Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQC-RLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAKL
        VDS GRSGGL LLW+S +   L SFS  HID  ++ + +   R + +YGHP A  ++ TW L++ L      PW VGGD+N +L  HEK  GR++P +++
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQC-RLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAKL

Query:  NGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
          FR+ + EC L +LG+KG++FTW N R  +  ++ER+DR  GN
Subjt:  NGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

XP_042988702.1 uncharacterized protein LOC122316234 [Carya illinoinensis]1.5e-3044.52Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWN---SIQCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA
        +D  G SGGLALLW    + +++S+S NHID  VE N   S++  ++  YG+P A  +  +W LL+ L       W V GD N ILF HEK  GR++ ++
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWN---SIQCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA

Query:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
        ++N FR  +D CSL ++GF+G K+TWCN R  +  V ER+DR FGN
Subjt:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

TrEMBL top hitse value%identityAlignment
A0A1R3GNW3 Reverse transcriptase1.0e-2743.26Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNS--IQCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAK
        V + GRSGGLA+ WD SV   LISFS +HID WV+ N    + RL+  YG      + ++W LL+    +    WF  GD N +L+Q EK+ GRE+PEA+
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNS--IQCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAK

Query:  LNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDR
        +  FR+A+D+C L ++G++G  FTW      +E + ER+DR
Subjt:  LNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDR

A0A2I4DZH7 uncharacterized protein LOC1089849032.8e-3043.15Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ---CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA
        + S GR GG+ALLWD+ +  ++I++S NH+D  ++ + ++     L+ IYG P+   +  +W L+K L R+   PW V GD N IL  HEK  G  +PE 
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ---CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEA

Query:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
        +L  FR+ VD C L +LG+ G KFTW NRR  D+ + ER+DRC  N
Subjt:  KLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

A0A2I4EA22 uncharacterized protein LOC1089877224.1e-2941.89Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQCR-----LSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKP
        + S GR GG+ALLWD  +  ++I++S NH+D  ++   ++ R     L+ +YG P+   +  +W LLK L R P  PW V GD N +L  HEK  G  +P
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQCR-----LSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKP

Query:  EAKLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
        E +L+ FR+ VD C L +LGF G   TW NRR  D+ + ER+D C  N
Subjt:  EAKLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

A0A2I4EB36 uncharacterized protein LOC1089879806.5e-2740.69Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAKLN
        VD+ G SGGLALLW   V   +IS+S +HID WVE +S Q  L+ IYG P+A  +  TW L++ L +  + PW V GD N I  Q EK  GR +   ++ 
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAKLN

Query:  GFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGNMA
         F   + + +L ++GF  +++TWCN+R     V ER+++  GN++
Subjt:  GFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGNMA

A0A803Q852 Uncharacterized protein2.9e-2741.67Show/hide
Query:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ-CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAKL
        V++ G+SGGL L+W   ++ N++SFS  HID ++     Q  R +  YG P    +  +W +L  + R    PW +GGD N IL Q EK+ G++KP   +
Subjt:  VDSFGRSGGLALLWDSSVSFNLISFSPNHIDGWVEWNSIQ-CRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAKL

Query:  NGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN
        N FR A+D+C L E+ F+G  FTWCN R +D  ++ER+DR  GN
Subjt:  NGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERIDRCFGN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGGATGGGGTAGGGTCAGAACAGATGCAGAGGTGGGAAAGGGTAGAAGAGAAGAGCCTAGAATGTGTTAGCAGATGGTGGTGGCTGGAGATTACCAGCCCCGC
CAGTTGTCATGAATATGCTTTTTTGGAATGCATGAGGTGTGGGGTCGGATCGTGCATTCCGCAGGTTGCACAAACTAGTGCAACAGTATCGACCTCTCTTGGTGTTCCTT
TCAGAGACGAAGGTACACTCTTCACGTTTGTTGACAGTTTTGGTAGAAGTGGGGGTTTGGCGTTGTTATGGGACTCCTCGGTTAGCTTCAATCTTATCTCCTTCTCCCCT
AACCACATTGATGGGTGGGTGGAATGGAACTCGATCCAGTGCCGTCTCTCTACTATCTATGGGCATCCTCAGGCAGAATTTAAATCGATGACTTGGGGCCTTCTGAAGCA
CCTTCGTCGAAATCCTGCCACTCCATGGTTTGTGGGTGGGGATGTCAATGCAATATTGTTTCAGCATGAAAAGGAAAGGGGTAGAGAGAAACCTGAGGCAAAGTTGAATG
GTTTTCGAGATGCAGTGGATGAGTGCAGTCTGGGTGAACTGGGTTTCAAAGGGGAGAAGTTTACTTGGTGTAACAGGAGACCCAGAGATGAGACGGTGTGGGAACGAATT
GACAGATGTTTTGGTAATATGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGGATGGGGTAGGGTCAGAACAGATGCAGAGGTGGGAAAGGGTAGAAGAGAAGAGCCTAGAATGTGTTAGCAGATGGTGGTGGCTGGAGATTACCAGCCCCGC
CAGTTGTCATGAATATGCTTTTTTGGAATGCATGAGGTGTGGGGTCGGATCGTGCATTCCGCAGGTTGCACAAACTAGTGCAACAGTATCGACCTCTCTTGGTGTTCCTT
TCAGAGACGAAGGTACACTCTTCACGTTTGTTGACAGTTTTGGTAGAAGTGGGGGTTTGGCGTTGTTATGGGACTCCTCGGTTAGCTTCAATCTTATCTCCTTCTCCCCT
AACCACATTGATGGGTGGGTGGAATGGAACTCGATCCAGTGCCGTCTCTCTACTATCTATGGGCATCCTCAGGCAGAATTTAAATCGATGACTTGGGGCCTTCTGAAGCA
CCTTCGTCGAAATCCTGCCACTCCATGGTTTGTGGGTGGGGATGTCAATGCAATATTGTTTCAGCATGAAAAGGAAAGGGGTAGAGAGAAACCTGAGGCAAAGTTGAATG
GTTTTCGAGATGCAGTGGATGAGTGCAGTCTGGGTGAACTGGGTTTCAAAGGGGAGAAGTTTACTTGGTGTAACAGGAGACCCAGAGATGAGACGGTGTGGGAACGAATT
GACAGATGTTTTGGTAATATGGCCTGA
Protein sequenceShow/hide protein sequence
MEVDGVGSEQMQRWERVEEKSLECVSRWWWLEITSPASCHEYAFLECMRCGVGSCIPQVAQTSATVSTSLGVPFRDEGTLFTFVDSFGRSGGLALLWDSSVSFNLISFSP
NHIDGWVEWNSIQCRLSTIYGHPQAEFKSMTWGLLKHLRRNPATPWFVGGDVNAILFQHEKERGREKPEAKLNGFRDAVDECSLGELGFKGEKFTWCNRRPRDETVWERI
DRCFGNMA