; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016529 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016529
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr12:38671760..38672353
RNA-Seq ExpressionLag0016529
SyntenyLag0016529
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050710.1 hypothetical protein E6C27_scaffold560G00040 [Cucumis melo var. makuwa]5.5e-6165.67Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F    A+GT ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR   Q  Q  RFP GP FL   RATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYFCKLDLTLK
        P+RFS+PNS+GF+ AES+W N Q+SPF R+VFR+G PPP  PP  VGQY  N    +E  GDCT+PYINQLEKCLPKV  G EEDD RQLY  K+DLTLK
Subjt:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYFCKLDLTLK

Query:  L
        L
Subjt:  L

KAB1219262.1 hypothetical protein CJ030_MR3G001255 [Morella rubra]4.6e-0731.28Show/hide
Query:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------
        PGG  P     +ACR+CD VF S+QALINHI +H+ ++ +A             +    M+ F P   ++A P  T + LP   +R              
Subjt:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------

Query:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVAD---GAEEDDARQLYFCKLDLTLKL
         LG D   A+    P Q  P ARN F   P    P   +       AE+   DCT+PY+NQL+  +  V D    +++ + +      LDL LKL
Subjt:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVAD---GAEEDDARQLYFCKLDLTLKL

KAB8495643.1 hypothetical protein FH972_025385 [Carpinus fangiana]6.4e-0934.74Show/hide
Query:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S
        P  S   +ACR+CD VF S+QALINHI +H+A++ +     AA+ SR+H    +++       F    P  A      L L  R S P+          S
Subjt:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S

Query:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYF--CKLDLTLKL
               +L P Q+SP AR  F    P       Q      A EE  GDCT+PY++QLE  +  V   A+ +D     F   KLDL LKL
Subjt:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYF--CKLDLTLKL

KAE8651808.1 hypothetical protein Csa_006798 [Cucumis sativus]4.0e-5964.68Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F R     T ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR  Q   Q  RFP GP FL  PRATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEE-AAGDCTRPYINQLEKCLPKVADGAEEDDARQLYFCKLDLTLK
        P+R+S+PN +GF+ AES+W NQ+SPF R+VFREG   P  PP  +GQY  N  A EE   GDCT+PYINQLEKCLPKV +G EEDD RQLY  K+DLTLK
Subjt:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEE-AAGDCTRPYINQLEKCLPKVADGAEEDDARQLYFCKLDLTLK

Query:  L
        L
Subjt:  L

KAG6574909.1 hypothetical protein SDJN03_25548, partial [Cucurbita argyrosperma subsp. sororia]2.2e-7375.88Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MAEF R+    TAADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+GA    ++AAASRR +QQRSQ HR PPGP     PRATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSA-PNSLGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKV-ADGAEEDDARQLYFCKLDLTLKL
        PSR+S  PNSLGFDAAESLWPNQLSPFAR++FREGPP   PPVGQYL NW+AAEEA GDCT+PYINQLEKCLPKV   G EEDD RQLYF KLDL+L+L
Subjt:  PSRFSA-PNSLGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKV-ADGAEEDDARQLYFCKLDLTLKL

TrEMBL top hitse value%identityAlignment
A0A0A0LNN3 C2H2-type domain-containing protein1.2e-5063.39Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F R     T ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR  Q   Q  RFP GP FL  PRATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEE-AAGDCTRPYINQLEKCLPKVADGAE
        P+R+S+PN +GF+ AES+W NQ+SPF R+VFREG   P  PP  +GQY  N  A EE   GDCT+PYINQLEKCLPKV  G E
Subjt:  PSRFSAPNSLGFDAAESLWPNQLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEE-AAGDCTRPYINQLEKCLPKVADGAE

A0A2N9E7H8 C2H2-type domain-containing protein4.5e-0831.18Show/hide
Query:  VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRS-QMHRFPPGPPFLAQPRATALFLPSRFSAPNSLGFDAAESLW-----------
        +ACR+CD VF S+QALINHI +H+ ++ A + +           QR    + F P       PR T     +R      L        +           
Subjt:  VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRS-QMHRFPPGPPFLAQPRATALFLPSRFSAPNSLGFDAAESLW-----------

Query:  -PNQLSPFARNVFREGPPPCAPPVGQYLPNWSAA-----EEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLY--FCKLDLTLKL
         P  +SP ARN F        PP  Q++ +   A     EE +GDCT+PY+NQL+  + K+ D  + +D         KLDL LKL
Subjt:  -PNQLSPFARNVFREGPPPCAPPVGQYLPNWSAA-----EEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLY--FCKLDLTLKL

A0A5A7U6B7 C2H2-type domain-containing protein2.7e-6165.67Show/hide
Query:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL
        MA+F    A+GT ADLHHLRPL IPG   PLVACRICDAVFSSSQALINHIGAHV+D+G        A SRR   Q  Q  RFP GP FL   RATA+FL
Subjt:  MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFL

Query:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYFCKLDLTLK
        P+RFS+PNS+GF+ AES+W N Q+SPF R+VFR+G PPP  PP  VGQY  N    +E  GDCT+PYINQLEKCLPKV  G EEDD RQLY  K+DLTLK
Subjt:  PSRFSAPNSLGFDAAESLWPN-QLSPFARNVFREG-PPPCAPP--VGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYFCKLDLTLK

Query:  L
        L
Subjt:  L

A0A5N6L1V8 C2H2-type domain-containing protein3.1e-0934.74Show/hide
Query:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S
        P  S   +ACR+CD VF S+QALINHI +H+A++ +     AA+ SR+H    +++       F    P  A      L L  R S P+          S
Subjt:  PGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHR-----FPPGPPFLAQPRATALFLPSRFSAPN----------S

Query:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYF--CKLDLTLKL
               +L P Q+SP AR  F    P       Q      A EE  GDCT+PY++QLE  +  V   A+ +D     F   KLDL LKL
Subjt:  LGFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYF--CKLDLTLKL

A0A6A1W232 C2H2-type domain-containing protein2.2e-0731.28Show/hide
Query:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------
        PGG  P     +ACR+CD VF S+QALINHI +H+ ++ +A             +    M+ F P   ++A P  T + LP   +R              
Subjt:  PGGSGPL----VACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLP---SRFSAPNS--------

Query:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVAD---GAEEDDARQLYFCKLDLTLKL
         LG D   A+    P Q  P ARN F   P    P   +       AE+   DCT+PY+NQL+  +  V D    +++ + +      LDL LKL
Subjt:  -LGFD---AAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVAD---GAEEDDARQLYFCKLDLTLKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAATTTTGCCGCAGCACCGCCCAAGGAACCGCCGCCGATCTCCACCATCTACGCCCGCTAACGATTCCCGGCGGAAGCGGTCCGCTCGTCGCTTGCCGAATCTG
CGACGCCGTGTTCTCCAGTAGCCAAGCCCTAATCAACCACATCGGAGCTCACGTCGCCGACGACGGCGCCGCCGCCGCCGTAGCAGCAGCAGCAGCTTCCAGAAGACATA
ATCAACAACGAAGCCAAATGCATCGGTTTCCGCCTGGTCCGCCGTTCTTGGCGCAGCCGCGAGCGACAGCGCTGTTTCTGCCGAGCAGATTCTCGGCGCCTAATTCGCTA
GGTTTTGACGCGGCGGAATCGCTTTGGCCAAATCAACTCTCTCCATTCGCTAGAAACGTCTTCAGAGAGGGGCCGCCGCCGTGTGCTCCGCCCGTCGGCCAGTACTTGCC
GAACTGGAGTGCGGCGGAGGAGGCGGCCGGCGACTGTACGAGGCCGTACATAAATCAATTGGAGAAATGTTTACCGAAAGTGGCGGACGGAGCTGAAGAAGACGACGCTC
GTCAACTGTATTTCTGCAAACTAGACCTCACTCTAAAGCTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGAATTTTGCCGCAGCACCGCCCAAGGAACCGCCGCCGATCTCCACCATCTACGCCCGCTAACGATTCCCGGCGGAAGCGGTCCGCTCGTCGCTTGCCGAATCTG
CGACGCCGTGTTCTCCAGTAGCCAAGCCCTAATCAACCACATCGGAGCTCACGTCGCCGACGACGGCGCCGCCGCCGCCGTAGCAGCAGCAGCAGCTTCCAGAAGACATA
ATCAACAACGAAGCCAAATGCATCGGTTTCCGCCTGGTCCGCCGTTCTTGGCGCAGCCGCGAGCGACAGCGCTGTTTCTGCCGAGCAGATTCTCGGCGCCTAATTCGCTA
GGTTTTGACGCGGCGGAATCGCTTTGGCCAAATCAACTCTCTCCATTCGCTAGAAACGTCTTCAGAGAGGGGCCGCCGCCGTGTGCTCCGCCCGTCGGCCAGTACTTGCC
GAACTGGAGTGCGGCGGAGGAGGCGGCCGGCGACTGTACGAGGCCGTACATAAATCAATTGGAGAAATGTTTACCGAAAGTGGCGGACGGAGCTGAAGAAGACGACGCTC
GTCAACTGTATTTCTGCAAACTAGACCTCACTCTAAAGCTCTAA
Protein sequenceShow/hide protein sequence
MAEFCRSTAQGTAADLHHLRPLTIPGGSGPLVACRICDAVFSSSQALINHIGAHVADDGAAAAVAAAAASRRHNQQRSQMHRFPPGPPFLAQPRATALFLPSRFSAPNSL
GFDAAESLWPNQLSPFARNVFREGPPPCAPPVGQYLPNWSAAEEAAGDCTRPYINQLEKCLPKVADGAEEDDARQLYFCKLDLTLKL