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Lag0016549 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016549
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionDNA topoisomerase 2
Genome locationchr12:38868911..38870992
RNA-Seq ExpressionLag0016549
SyntenyLag0016549
Gene Ontology termsGO:0006265 - DNA topological change (biological process)
GO:0043231 - intracellular membrane-bounded organelle (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003918 - DNA topoisomerase type II (ATP-hydrolyzing) activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022152631.1 DNA topoisomerase 2 isoform X1 [Momordica charantia]2.4e-0675Show/hide
Query:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
        ++EEE EE GNEGK++GSASS+TAEE+AGF P RGRSQR NRTQ
Subjt:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
XP_022152632.1 DNA topoisomerase 2 isoform X2 [Momordica charantia]2.4e-0675Show/hide
Query:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
        ++EEE EE GNEGK++GSASS+TAEE+AGF P RGRSQR NRTQ
Subjt:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
TrEMBL top hitse value%identityAlignment
A0A6J1DGT3 DNA topoisomerase 21.2e-0675Show/hide
Query:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
        ++EEE EE GNEGK++GSASS+TAEE+AGF P RGRSQR NRTQ
Subjt:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
A0A6J1DIB5 DNA topoisomerase 21.2e-0675Show/hide
Query:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
        ++EEE EE GNEGK++GSASS+TAEE+AGF P RGRSQR NRTQ
Subjt:  QQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATAGAAAACCTTTCATTTTCTCAACAAGAGGAAGAAGAAGAAGAAGGTGGAAATGAAGGGAAGATGGTGGGGTCTGCTTCTTCTGATACGGCTGAAGAAACCGC
CGGATTTCCGCCGGAGAGAGGAAGATCACAGAGGGTGAACAGAACTCAGTTTGGGTTGGATTGTTCCATTTTGATGAAGCCTAATCTTATTCCCCCCTCTCGAGCTCTCT
GTTCTCTCTCCGTCGCCTCACCCTCCGTCGCCAATTATCTCGCTGTCCGTCGCCCTTGCCTCACCGTCTGTAACTTCCTATTGAGTCCTCTCTGCAACGACATCCATCTC
AGTGACGGCCGCGGCAATCGCCGTTGCCGGCGAACAGCCGCTGTCGCCGCCAGTTTTTTTTTTTTCATCTCCTTTCCTTCATCTTTTCTTTCCCCCTTTCTTCATTTCCC
TCTCGTCGAAGCCCTTCCCCTCGAGCACAACCGCGAAGCCCACAACCGTGACTCCCTCTCGAGCACAACGCGAAACCCTCCCTCTCGAGCACAACCGCGAGCACAATATG
GTTACCGAAGCCCTCCCCGCCGCTTCCCGGTGAGCACAAACATATCTAGGATCGTCCTCGTCGTGGGTCTGAATCGTGGTCTGAAACAAAACCCAGATTTGAAACGAAGG
GGATTCCCCTTCGTTTCAAACTGGAATAGAAGGGAGCGGCAGTCGCCGAAGGATTCGTGGTCTGAGAAGGAGAAGCTTCGACCACCAGATTGCGGTTCGGAGGGAGGGAG
ATTTGCATCGAAAGGGAGGGTTGAATTGAGGCGGGAGAAGAAAGAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAATAGAAAACCTTTCATTTTCTCAACAAGAGGAAGAAGAAGAAGAAGGTGGAAATGAAGGGAAGATGGTGGGGTCTGCTTCTTCTGATACGGCTGAAGAAACCGC
CGGATTTCCGCCGGAGAGAGGAAGATCACAGAGGGTGAACAGAACTCAGTTTGGGTTGGATTGTTCCATTTTGATGAAGCCTAATCTTATTCCCCCCTCTCGAGCTCTCT
GTTCTCTCTCCGTCGCCTCACCCTCCGTCGCCAATTATCTCGCTGTCCGTCGCCCTTGCCTCACCGTCTGTAACTTCCTATTGAGTCCTCTCTGCAACGACATCCATCTC
AGTGACGGCCGCGGCAATCGCCGTTGCCGGCGAACAGCCGCTGTCGCCGCCAGTTTTTTTTTTTTCATCTCCTTTCCTTCATCTTTTCTTTCCCCCTTTCTTCATTTCCC
TCTCGTCGAAGCCCTTCCCCTCGAGCACAACCGCGAAGCCCACAACCGTGACTCCCTCTCGAGCACAACGCGAAACCCTCCCTCTCGAGCACAACCGCGAGCACAATATG
GTTACCGAAGCCCTCCCCGCCGCTTCCCGGTGAGCACAAACATATCTAGGATCGTCCTCGTCGTGGGTCTGAATCGTGGTCTGAAACAAAACCCAGATTTGAAACGAAGG
GGATTCCCCTTCGTTTCAAACTGGAATAGAAGGGAGCGGCAGTCGCCGAAGGATTCGTGGTCTGAGAAGGAGAAGCTTCGACCACCAGATTGCGGTTCGGAGGGAGGGAG
ATTTGCATCGAAAGGGAGGGTTGAATTGAGGCGGGAGAAGAAAGAAGAATAA
Protein sequenceShow/hide protein sequence
MKIENLSFSQQEEEEEEGGNEGKMVGSASSDTAEETAGFPPERGRSQRVNRTQFGLDCSILMKPNLIPPSRALCSLSVASPSVANYLAVRRPCLTVCNFLLSPLCNDIHL
SDGRGNRRCRRTAAVAASFFFFISFPSSFLSPFLHFPLVEALPLEHNREAHNRDSLSSTTRNPPSRAQPRAQYGYRSPPRRFPVSTNISRIVLVVGLNRGLKQNPDLKRR
GFPFVSNWNRRERQSPKDSWSEKEKLRPPDCGSEGGRFASKGRVELRREKKEE