; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016551 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016551
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr12:38884118..38888306
RNA-Seq ExpressionLag0016551
SyntenyLag0016551
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain
IPR026960 - Reverse transcriptase zinc-binding domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3951697.1 hypothetical protein CMV_022679 [Castanea mollissima]6.9e-0826.96Show/hide
Query:  KSGYRLGQMALLAQTP-PSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVLNADSMLHLLRNVKDKVD------------WVKF
        KS Y + +  L + +   +S  +  +  WK  W++ +P KI+IF W LC   +PT+ NL+ RGI V   D +  + +N ++ V+            W K+
Subjt:  KSGYRLGQMALLAQTP-PSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVLNADSMLHLLRNVKDKVD------------WVKF

Query:  EEL----------VVVLWVVCCCQNQQKFRGFDRGVAVVDE--MRLVVEMGLAPVILEIDSMRVYMVLQDTAMV-----DLSELGVLGSEARREVFAHLQ
         +           +  + ++   Q  Q     +   A+V E  + L +E+GL  VILE DS++    ++D   +     DLS+  V  +E R        
Subjt:  EEL----------VVVLWVVCCCQNQQKFRGFDRGVAVVDE--MRLVVEMGLAPVILEIDSMRVYMVLQDTAMV-----DLSELGVLGSEARREVFAHLQ

Query:  FRFSFTRRDGNLVAHELAHFALRERDCMRW
               R+GN +AHELA  A R+ +   W
Subjt:  FRFSFTRRDGNLVAHELAHFALRERDCMRW

TXG59086.1 hypothetical protein EZV62_016915 [Acer yangbiense]2.0e-0744.58Show/hide
Query:  LRHHFSPR-----KSGYRLGQMALLAQTPPSSSSESLSS----WWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVL
        ++ HF P      KSGYRLG    L   P SS S   SS    WWK  WK+ +PNK+K+F+W+ C   LP+ +NL+ R I VL
Subjt:  LRHHFSPR-----KSGYRLGQMALLAQTPPSSSSESLSS----WWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVL

XP_022143319.1 uncharacterized protein LOC111013220 [Momordica charantia]9.4e-1332.91Show/hide
Query:  WNEELLRHHFSPRKSGYRLGQMALLAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV----------------------
        WN E  ++     KS Y+L  M     +  +S SE L+ WWK  W++ +P+KIK+F WR CL+RLPT  NL +RG+DV                      
Subjt:  WNEELLRHHFSPRKSGYRLGQMALLAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV----------------------

Query:  -----------------LNADSMLHLLRNVKDKVDWVKFEELVVVLWVVCCCQNQQKF
                         +   S+LHLLR+ +  + W  FEELVV LW +   +N + F
Subjt:  -----------------LNADSMLHLLRNVKDKVDWVKFEELVVVLWVVCCCQNQQKF

XP_022150918.1 uncharacterized protein LOC111018954 [Momordica charantia]5.5e-1335.58Show/hide
Query:  KSGYRLGQMALL----AQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVL--------NADSMLHL--------------
        +SGY+   +ALL     Q P SSSSE +  WW   WKM +PNKIK+FLWRLCL+RLPT  NLS RG+++         N +  +HL              
Subjt:  KSGYRLGQMALL----AQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVL--------NADSMLHL--------------

Query:  ----------LRNVKDKVDWVKFEELVVVLWVVCCCQNQQKFRGFDRGVAVVDEMRLVVEMGL
                  LR   + +    FEEL VV+W +    NQ+  R F+      D  + V ++G+
Subjt:  ----------LRNVKDKVDWVKFEELVVVLWVVCCCQNQQKFRGFDRGVAVVDEMRLVVEMGL

XP_042969199.1 uncharacterized protein LOC122301911 [Carya illinoinensis]1.3e-0925.59Show/hide
Query:  LRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVS-GQWNEELLRHHFSPR------------------------------KSGYRLGQMALL
        +RIFK P  P+  S S++        + ++ + +V  L   S G WN  ++R  F+P                               KS Y   Q    
Subjt:  LRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVS-GQWNEELLRHHFSPR------------------------------KSGYRLGQMALL

Query:  AQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGI------DVLNADSMLHLLRNVKDKVDWVKFEELVVVLWVVCC--CQNQQ
             SSS  S + +WK  W + +P K+KIF W+ C E+LPT  NL  + +       + N   +  +LRN   +V             VV C   + + 
Subjt:  AQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGI------DVLNADSMLHLLRNVKDKVDWVKFEELVVVLWVVCC--CQNQQ

Query:  KFRGFDRGVAVVDEMRLVVEMGLAPVILEIDSMRVYMVLQDTAMVDLSELGVLGSEARREVFAHLQFRFSFTRRDGNLVAHELA-HFALRERDCMRW
         F  F   +A++  ++L V+ G+  ++L+ D + +   L + +   L++   +  + RR + A  + +     R GNLVAH LA H  L    CM W
Subjt:  KFRGFDRGVAVVDEMRLVVEMGLAPVILEIDSMRVYMVLQDTAMVDLSELGVLGSEARREVFAHLQFRFSFTRRDGNLVAHELA-HFALRERDCMRW

TrEMBL top hitse value%identityAlignment
A0A6J1CNZ5 uncharacterized protein LOC1110132204.5e-1332.91Show/hide
Query:  WNEELLRHHFSPRKSGYRLGQMALLAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV----------------------
        WN E  ++     KS Y+L  M     +  +S SE L+ WWK  W++ +P+KIK+F WR CL+RLPT  NL +RG+DV                      
Subjt:  WNEELLRHHFSPRKSGYRLGQMALLAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV----------------------

Query:  -----------------LNADSMLHLLRNVKDKVDWVKFEELVVVLWVVCCCQNQQKF
                         +   S+LHLLR+ +  + W  FEELVV LW +   +N + F
Subjt:  -----------------LNADSMLHLLRNVKDKVDWVKFEELVVVLWVVCCCQNQQKF

A0A6J1DAR4 uncharacterized protein LOC1110189542.7e-1335.58Show/hide
Query:  KSGYRLGQMALL----AQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVL--------NADSMLHL--------------
        +SGY+   +ALL     Q P SSSSE +  WW   WKM +PNKIK+FLWRLCL+RLPT  NLS RG+++         N +  +HL              
Subjt:  KSGYRLGQMALL----AQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVL--------NADSMLHL--------------

Query:  ----------LRNVKDKVDWVKFEELVVVLWVVCCCQNQQKFRGFDRGVAVVDEMRLVVEMGL
                  LR   + +    FEEL VV+W +    NQ+  R F+      D  + V ++G+
Subjt:  ----------LRNVKDKVDWVKFEELVVVLWVVCCCQNQQKFRGFDRGVAVVDEMRLVVEMGL

A0A803PLN3 Uncharacterized protein3.6e-1025.79Show/hide
Query:  RDLRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVSGQWNEELLRHHFSPR------------------------------KSGYRLGQMAL
        R++R+++    P  S        M+     +E  T++       GQW  + ++ HF                                 KSGYR+G+  +
Subjt:  RDLRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVSGQWNEELLRHHFSPR------------------------------KSGYRLGQMAL

Query:  LAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVLN----ADSMLHLLRNVKDKVDWVKFEELVVVLWVV
            P SS+ E    WWK  W M +P ++K+F WR+C   LP   NL+ RG+DV        SM  +L  +K+++D  +FE+ + ++W +
Subjt:  LAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDVLN----ADSMLHLLRNVKDKVDWVKFEELVVVLWVV

A0A803PPQ0 Uncharacterized protein6.8e-0930.52Show/hide
Query:  RDLRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVSGQWNEELLRHHFSPR------------------------------KSGYRLGQMAL
        R+ R+++    P PS        +++ P  LE  T++ DL    GQW  + L+ HF                                 KSGYR+G+   
Subjt:  RDLRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVSGQWNEELLRHHFSPR------------------------------KSGYRLGQMAL

Query:  LAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV
        L  T  SS+ E +  WWK  W M +P ++K+F WR+C   LP   NL+ RG+DV
Subjt:  LAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV

A0A803PR93 Uncharacterized protein5.2e-0930.67Show/hide
Query:  RDLRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVSGQWNEELLRHHFSPR------------------------------KSGYRLGQMAL
        R+ R+++    P PS        +++ P  LE  T++ +L    GQW  + L+ HF                                 KSGYR+G+   
Subjt:  RDLRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVSGQWNEELLRHHFSPR------------------------------KSGYRLGQMAL

Query:  LAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV-LNADSMLH
        L  T  SS+ E +  WWK  W M +P ++K+F WR+C   LP   NL+ RG+DV LN D   H
Subjt:  LAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLERLPTVDNLSIRGIDV-LNADSMLH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGGATTTGAGGATATTCAAAGCTCCCATTTGTCCAAATCCCTCCTCCAAATCAGCTATGTTTGCTGCCATGATACGGTCCCCGGTTACTTTAGAACATGATACTCA
AGTGGCTGATCTTTTTACTGTTTCTGGTCAATGGAATGAGGAACTTCTTCGGCATCACTTTAGTCCTCGCAAGAGTGGGTACCGGCTTGGCCAGATGGCTTTGCTTGCTC
AAACCCCACCTTCTTCTTCGAGTGAGTCACTATCCAGTTGGTGGAAGAGGTGTTGGAAAATGGGGGTCCCAAACAAAATTAAGATTTTCTTGTGGAGGCTTTGCTTGGAG
CGACTACCCACTGTTGATAATTTGAGTATCAGGGGTATTGATGTGTTGAATGCGGATTCTATGCTTCATCTGCTTAGGAATGTGAAGGATAAGGTCGACTGGGTTAAGTT
TGAGGAGCTTGTTGTGGTGTTGTGGGTTGTGTGTTGTTGTCAAAACCAACAGAAGTTTAGAGGATTTGACAGAGGGGTAGCGGTGGTGGACGAAATGAGACTTGTGGTGG
AGATGGGTTTAGCTCCGGTAATCCTTGAGATTGATTCTATGCGTGTATATATGGTGTTGCAAGATACTGCGATGGTGGATTTATCTGAGCTCGGTGTGCTGGGTTCTGAG
GCTCGAAGGGAGGTGTTTGCGCATCTTCAGTTCAGATTCAGTTTTACAAGAAGGGATGGAAACCTTGTCGCCCATGAGTTAGCACATTTTGCTTTGAGAGAGAGAGATTG
CATGCGGTGGTTGAAGTTTCAAAGATTCCACGACTTATCCTCAAGAATCCCCTACATCAGGAAAGACCTAAAATATGGGCTCGAGGACCAAGTCGAGTTCAGACGAGCTA
GTCCAGAGCAAACTAAAACTGGGGAAGACATGACCTGCAAGACCAGCAAAAACCGCTGCACACCAGCATGGTGTAGGCCACACCACCTCCGATGCTTAAGTCAGAGAATG
GGAAGAGAGCAGGAAAGTAAGAGAAGAGAGTCGATAATTCAGTTCGGGTCCCCTTTCTTCAGTGGCGAAGAGGGGTATAAATACCTGCTCATGCTCCTAGGATTTTTTAG
GAGTTTAGAGGCGTTTCGAGACAAACCAGGAGGATCCAGGGCGGCTGGAGGCTACAGGGACCAAACGGGGCCCAACGGGCTCGGCCCGCACGAGCGGGCCGAGGCCGAGC
AAGGGGTCGGGCCAGCCCAACCCCTTCGGTCTTGGCTCGTCCCGCTCGCCGGTTTTGCCTCTTGGGTCCATCTTCCGCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGGATTTGAGGATATTCAAAGCTCCCATTTGTCCAAATCCCTCCTCCAAATCAGCTATGTTTGCTGCCATGATACGGTCCCCGGTTACTTTAGAACATGATACTCA
AGTGGCTGATCTTTTTACTGTTTCTGGTCAATGGAATGAGGAACTTCTTCGGCATCACTTTAGTCCTCGCAAGAGTGGGTACCGGCTTGGCCAGATGGCTTTGCTTGCTC
AAACCCCACCTTCTTCTTCGAGTGAGTCACTATCCAGTTGGTGGAAGAGGTGTTGGAAAATGGGGGTCCCAAACAAAATTAAGATTTTCTTGTGGAGGCTTTGCTTGGAG
CGACTACCCACTGTTGATAATTTGAGTATCAGGGGTATTGATGTGTTGAATGCGGATTCTATGCTTCATCTGCTTAGGAATGTGAAGGATAAGGTCGACTGGGTTAAGTT
TGAGGAGCTTGTTGTGGTGTTGTGGGTTGTGTGTTGTTGTCAAAACCAACAGAAGTTTAGAGGATTTGACAGAGGGGTAGCGGTGGTGGACGAAATGAGACTTGTGGTGG
AGATGGGTTTAGCTCCGGTAATCCTTGAGATTGATTCTATGCGTGTATATATGGTGTTGCAAGATACTGCGATGGTGGATTTATCTGAGCTCGGTGTGCTGGGTTCTGAG
GCTCGAAGGGAGGTGTTTGCGCATCTTCAGTTCAGATTCAGTTTTACAAGAAGGGATGGAAACCTTGTCGCCCATGAGTTAGCACATTTTGCTTTGAGAGAGAGAGATTG
CATGCGGTGGTTGAAGTTTCAAAGATTCCACGACTTATCCTCAAGAATCCCCTACATCAGGAAAGACCTAAAATATGGGCTCGAGGACCAAGTCGAGTTCAGACGAGCTA
GTCCAGAGCAAACTAAAACTGGGGAAGACATGACCTGCAAGACCAGCAAAAACCGCTGCACACCAGCATGGTGTAGGCCACACCACCTCCGATGCTTAAGTCAGAGAATG
GGAAGAGAGCAGGAAAGTAAGAGAAGAGAGTCGATAATTCAGTTCGGGTCCCCTTTCTTCAGTGGCGAAGAGGGGTATAAATACCTGCTCATGCTCCTAGGATTTTTTAG
GAGTTTAGAGGCGTTTCGAGACAAACCAGGAGGATCCAGGGCGGCTGGAGGCTACAGGGACCAAACGGGGCCCAACGGGCTCGGCCCGCACGAGCGGGCCGAGGCCGAGC
AAGGGGTCGGGCCAGCCCAACCCCTTCGGTCTTGGCTCGTCCCGCTCGCCGGTTTTGCCTCTTGGGTCCATCTTCCGCTCTGA
Protein sequenceShow/hide protein sequence
MRDLRIFKAPICPNPSSKSAMFAAMIRSPVTLEHDTQVADLFTVSGQWNEELLRHHFSPRKSGYRLGQMALLAQTPPSSSSESLSSWWKRCWKMGVPNKIKIFLWRLCLE
RLPTVDNLSIRGIDVLNADSMLHLLRNVKDKVDWVKFEELVVVLWVVCCCQNQQKFRGFDRGVAVVDEMRLVVEMGLAPVILEIDSMRVYMVLQDTAMVDLSELGVLGSE
ARREVFAHLQFRFSFTRRDGNLVAHELAHFALRERDCMRWLKFQRFHDLSSRIPYIRKDLKYGLEDQVEFRRASPEQTKTGEDMTCKTSKNRCTPAWCRPHHLRCLSQRM
GREQESKRRESIIQFGSPFFSGEEGYKYLLMLLGFFRSLEAFRDKPGGSRAAGGYRDQTGPNGLGPHERAEAEQGVGPAQPLRSWLVPLAGFASWVHLPL