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Lag0016552 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016552
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
Descriptioncorneodesmosin
Genome locationchr12:38921448..38922996
RNA-Seq ExpressionLag0016552
SyntenyLag0016552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_015472393.2 basic proline-rich protein-like, partial [Parus major]1.3e-0432.6Show/hide
Query:  PGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFLGPLFKRRGHPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYT
        PGP       P  A  L G++   PR  PGPL K  G P       G   G P    GPL K  G P      LGK LG     P PL K    P     
Subjt:  PGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRGAYTLLGKSLGRPRNFLGPLFKRRGHPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYT

Query:  LLGKKLGEAWVVPEPLFKHRRHPRGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG
        LLG   G     P PL      P G+ T   G + G  G  P L        G      GK+ G PG+ P    ++   PG
Subjt:  LLGKKLGEAWVVPEPLFKHRRHPRGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG

XP_030053253.1 corneodesmosin [Microcaecilia unicolor]2.7e-0534.48Show/hide
Query:  PRGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG
        P G  ++ +G S    G  PS SS ++ +PG  ++ +G S G  G  PS SS ++ +PG  ++ +G S G  G  PS SS ++ + G
Subjt:  PRGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG

XP_038776240.1 uncharacterized protein EAF01_001084 [Botrytis porri]1.0e-0431.03Show/hide
Query:  GKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKS
        G+++  PG    L +S+  +PG  TL  G ++  PG   +LS S+  +PG  T+  G +   PG+  +L  S   +PG+ T   G +
Subjt:  GKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKS

TrEMBL top hitse value%identityAlignment
A0A6P7XL68 corneodesmosin1.3e-0534.48Show/hide
Query:  PRGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG
        P G  ++ +G S    G  PS SS ++ +PG  ++ +G S G  G  PS SS ++ +PG  ++ +G S G  G  PS SS ++ + G
Subjt:  PRGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTGAGCCTCGCTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCC
TTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCAGGGCCTCTCT
TCAAGCGTCGTGATCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGT
GCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCTTGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCT
TGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGTAGTTCCCGAGC
CTCTCTTCAAGCATCGTCGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATC
CCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGG
AAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTAGGAATT
TCCCAAGGCCTCTCTTCAAGCGTCGTGGTCATCCCAAGAAGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTG
CGTACACTCCTCTGGGGAAAAGCTTTGGGAGGCCTGGGAATCTCCCGAGTCTCTCTGCAAGCGCTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTTGAGCCTCGCTTCTCCATCACTTGTTTGTTTGCCTCATAGTTGGACTCATGTGCGGATACTTGGTCTGCGAAGTGACTACCGGACTCAGTCGAGCCCCATTCC
TTGTCTAATGGTCGGCCTTAGCCTTGGCATGAGGACGAGCACTTTCCCTGCATGGCTTGAGAAGTTTGAGGGAAGCTTGGGGAGGCTTTGGGATTTCCCAGGGCCTCTCT
TCAAGCGTCGTGATCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCCAGGGCCTCTCTTCAAGCGTTGTGGTCATCCCAGGGGT
GCGTACACTCTTCTGGGGAAAAGCTTGGGGAGGCCTAGGAATTTCCTTGGGCCTCTCTTCAAGCGTCGTGGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCT
TGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGTAGTTCCCGAGC
CTCTCTTCAAGCATCGTCGTCATCCCAGGGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATC
CCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGG
AAAAAGCTTGGGGAGGCCTGGGAAGTTCCCGAGCCTCTCTTCAAGCATCGTCGTCATCCCAGGGGTGCGTACACTCTTCTGGGGAAAAAGCTTGGGGAGGCCTAGGAATT
TCCCAAGGCCTCTCTTCAAGCGTCGTGGTCATCCCAAGAAGCATCTCCCTTTCGGCTTGAACCGCTTCGGCTACGATAACAGGTCAAGTGTTGTGGTCTTCCCAGGGGTG
CGTACACTCCTCTGGGGAAAAGCTTTGGGAGGCCTGGGAATCTCCCGAGTCTCTCTGCAAGCGCTGTCAAAACTTTTGAAACGAAATTCAGAGTAA
Protein sequenceShow/hide protein sequence
MRLSLASPSLVCLPHSWTHVRILGLRSDYRTQSSPIPCLMVGLSLGMRTSTFPAWLEKFEGSLGRLWDFPGPLFKRRDHPRGAYTLLGKSLGRPRNFPGPLFKRCGHPRG
AYTLLGKSLGRPRNFLGPLFKRRGHPRGAYTLLGKKLGEAWEVPEPLFKHRRHPRGAYTLLGKKLGEAWVVPEPLFKHRRHPRGVRTLFWGKSLGRPGKFPSLSSSIVVI
PGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPGKFPSLSSSIVVIPGVRTLFWGKSLGRPRNFPRPLFKRRGHPKKHLPFGLNRFGYDNRSSVVVFPGV
RTLLWGKALGGLGISRVSLQALSKLLKRNSE