; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016553 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016553
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:38923185..38926880
RNA-Seq ExpressionLag0016553
SyntenyLag0016553
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsIPR002156 - Ribonuclease H domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022143535.1 uncharacterized protein LOC111013412 [Momordica charantia]9.3e-0434.04Show/hide
Query:  IKCLEAQAIVEGLKAYIKFDFFEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
        I  LE  AI EGL+A           C+ P+ +ESDS+E +  ++R+  DQ+E+ ++++EI  +   + + S+   SR++NK  H L R A  N
Subjt:  IKCLEAQAIVEGLKAYIKFDFFEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
XP_022156777.1 uncharacterized protein LOC111023608 [Momordica charantia]3.2e-0434.38Show/hide
Query:  IKCLEAQAIVEGLKAYIKFDF--FEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
        I  LE  AI EGL+A  +      +   C+ P+ +ESDS+E +  ++R+  DQ+E+ ++++EI  +   + + S+   SR++NK  HDL R A  N
Subjt:  IKCLEAQAIVEGLKAYIKFDF--FEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
TrEMBL top hitse value%identityAlignment
A0A6J1CP26 uncharacterized protein LOC1110134124.5e-0434.04Show/hide
Query:  IKCLEAQAIVEGLKAYIKFDFFEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
        I  LE  AI EGL+A           C+ P+ +ESDS+E +  ++R+  DQ+E+ ++++EI  +   + + S+   SR++NK  H L R A  N
Subjt:  IKCLEAQAIVEGLKAYIKFDFFEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
A0A6J1DSV1 uncharacterized protein LOC1110236081.6e-0434.38Show/hide
Query:  IKCLEAQAIVEGLKAYIKFDF--FEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
        I  LE  AI EGL+A  +      +   C+ P+ +ESDS+E +  ++R+  DQ+E+ ++++EI  +   + + S+   SR++NK  HDL R A  N
Subjt:  IKCLEAQAIVEGLKAYIKFDF--FEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQALSNLLGVSSISKCSRKSNKTTHDLTRVAASN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAAACAAGCAAGCGAACAACACAGAGGAGCTGGTCGTCCTCATGCCAAGGCCGAGGCCGACCATCCAGAGGCCAAGGTCGAGTTCCGCCCCTAGAGGCCCAGGATG
TGGTGACTCTTGCAGAGGCCAAACTTCCGTACTTTCCCTTGGAAAGAGACTAAACTCTTGCAGAGAGGTTGACGCATCCCTCAACCTCCCCAAGCTTTTTCCCCAAAAGA
GTCACAGCCGAAGCGCTCAAAGCTGCAAGGAGATGCTTAAGGTAGGGTCAGGCAAGTCTACACATAAGCCTAGCTGTCGAGCAAACAAACAGTACAGAGAAGCTGGTCAG
CCTCATGCCAAGGCCGAGGCCGACCATCCACCTTCAAAAGGCCAGACCACCACAGCGTACGAGGAGCTGACAGGACAACCGAGAGGAGATAGGACCAGGAAAGGGACCCA
GAGGGAAACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGCCGAGCCGAGCATTATGGTCGGCCTCGGCCCAAGGCCGAGGCCGA
CCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTATCGCTTTCAGCTACCTCGGTCCAGCCTGCTTCGTCCCCGAACGCCTCCAAACCCTAGG
AGTCCGAGCAGGCATCGGAGGTGGTGTGGCCTATACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCCAACTTCTACAAATTCATTGTTGGT
GTCACGTGAAGGGCAGAGAAAATGGCCTATTAAATGTCTGGAAGCGCAAGCAATTGTCGAGGGGCTGAAAGCCTACATAAAATTCGATTTTTTCGAAGGAAGAAGATGCA
AGCTACCTCTGGTTATTGAATCAGATTCCGTCGAGGTCGTGGGAGCTGTCAATCGTGAGCTTGATGATCAATCGGAGCTCTGCTATATAGTCAAAGAGATCCAGGCACTG
TCGAATCTGCTGGGCGTTTCTTCCATCTCCAAGTGCTCGAGGAAGAGTAACAAAACGACGCACGACTTAACCCGCGTGGCTGCTTCTAATGGTAGTTTTGGTTTTTTGGG
TTACTCTCTTCTCCTCTGTGAAGAAGATGAAGTGTTTTGGAGGGAAATGTCTTTCCCCTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAAACAAGCAAGCGAACAACACAGAGGAGCTGGTCGTCCTCATGCCAAGGCCGAGGCCGACCATCCAGAGGCCAAGGTCGAGTTCCGCCCCTAGAGGCCCAGGATG
TGGTGACTCTTGCAGAGGCCAAACTTCCGTACTTTCCCTTGGAAAGAGACTAAACTCTTGCAGAGAGGTTGACGCATCCCTCAACCTCCCCAAGCTTTTTCCCCAAAAGA
GTCACAGCCGAAGCGCTCAAAGCTGCAAGGAGATGCTTAAGGTAGGGTCAGGCAAGTCTACACATAAGCCTAGCTGTCGAGCAAACAAACAGTACAGAGAAGCTGGTCAG
CCTCATGCCAAGGCCGAGGCCGACCATCCACCTTCAAAAGGCCAGACCACCACAGCGTACGAGGAGCTGACAGGACAACCGAGAGGAGATAGGACCAGGAAAGGGACCCA
GAGGGAAACCATACCGACGGGCCGGGCCAACGTGGCCCGACCCGTACGGTCGGCCTCGGCCTTGGCCGAGCCGAGCATTATGGTCGGCCTCGGCCCAAGGCCGAGGCCGA
CCACTCGGCCCGTTTGCGCGGGCCGAGTCCGTTTGCCTCCGCTCGGCCCCTATCGCTTTCAGCTACCTCGGTCCAGCCTGCTTCGTCCCCGAACGCCTCCAAACCCTAGG
AGTCCGAGCAGGCATCGGAGGTGGTGTGGCCTATACCACACCGGTGTCCAGCGATTCTTGCTGGTCTTGCAGGTCACGTCTTCCCCAACTTCTACAAATTCATTGTTGGT
GTCACGTGAAGGGCAGAGAAAATGGCCTATTAAATGTCTGGAAGCGCAAGCAATTGTCGAGGGGCTGAAAGCCTACATAAAATTCGATTTTTTCGAAGGAAGAAGATGCA
AGCTACCTCTGGTTATTGAATCAGATTCCGTCGAGGTCGTGGGAGCTGTCAATCGTGAGCTTGATGATCAATCGGAGCTCTGCTATATAGTCAAAGAGATCCAGGCACTG
TCGAATCTGCTGGGCGTTTCTTCCATCTCCAAGTGCTCGAGGAAGAGTAACAAAACGACGCACGACTTAACCCGCGTGGCTGCTTCTAATGGTAGTTTTGGTTTTTTGGG
TTACTCTCTTCTCCTCTGTGAAGAAGATGAAGTGTTTTGGAGGGAAATGTCTTTCCCCTTTTGA
Protein sequenceShow/hide protein sequence
MENKQANNTEELVVLMPRPRPTIQRPRSSSAPRGPGCGDSCRGQTSVLSLGKRLNSCREVDASLNLPKLFPQKSHSRSAQSCKEMLKVGSGKSTHKPSCRANKQYREAGQ
PHAKAEADHPPSKGQTTTAYEELTGQPRGDRTRKGTQRETIPTGRANVARPVRSASALAEPSIMVGLGPRPRPTTRPVCAGRVRLPPLGPYRFQLPRSSLLRPRTPPNPR
SPSRHRRWCGLYHTGVQRFLLVLQVTSSPTSTNSLLVSREGQRKWPIKCLEAQAIVEGLKAYIKFDFFEGRRCKLPLVIESDSVEVVGAVNRELDDQSELCYIVKEIQAL
SNLLGVSSISKCSRKSNKTTHDLTRVAASNGSFGFLGYSLLLCEEDEVFWREMSFPF