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Lag0016568 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016568
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionUnknown protein
Genome locationchr12:39073506..39073838
RNA-Seq ExpressionLag0016568
SyntenyLag0016568
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593848.1 putative protein, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3678.15Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS--------HHKESEPEKPPVFKKWQHP
        MA+SQRR S TAA ++   QPSRLQRRAPASLQI+RSDW VAIPLLSPLVSPSSP +IQN T DSGS SSSSS        HHKESEPEKPPVFKKWQHP
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS--------HHKESEPEKPPVFKKWQHP

Query:  AAPFHYDSGPRAPR-FVPV
        AAPFHYDSG RAPR FVPV
Subjt:  AAPFHYDSGPRAPR-FVPV

XP_022930471.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita moschata]9.0e-3780.17Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-----HHKESEPEKPPVFKKWQHPAAP
        MA+SQRR S TAA ++   QPSRLQRRAPASLQI+RSDW VAIPLLSPLVSPSSP +IQN T DSGS SSSSS     HHKESEPEKPPVFKKWQHPAAP
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-----HHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGPRAPR-FVPV
        FHYDSG RAPR FVPV
Subjt:  FHYDSGPRAPR-FVPV

XP_023000559.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita maxima]4.5e-3677.97Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-------HHKESEPEKPPVFKKWQHPA
        MA+SQRR S  AA ++   QPSRLQRRAPASLQI+RSDW VAIPLLSPLVSPSSP +IQN T DSGS SSSSS       HHKESEPEKPPVFKKWQHPA
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-------HHKESEPEKPPVFKKWQHPA

Query:  APFHYDSGPRAPR-FVPV
        APFHYDSG RAPR FVPV
Subjt:  APFHYDSGPRAPR-FVPV

XP_023515028.1 uncharacterized protein At4g14450, chloroplastic-like [Cucurbita pepo subsp. pepo]1.7e-3578.26Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSS----SSHHKESEPEKPPVFKKWQHPAAPF
        MA+SQRR SATA+ ++   QPSRLQRRAPASLQI+RSDW VAIPLLSPLVSPSSP +IQN T DSG+ SSS      HHKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSS----SSHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGPRAPR-FVPV
        HYDSG RAPR FVPV
Subjt:  HYDSGPRAPR-FVPV

XP_038875425.1 uncharacterized protein At4g14450, chloroplastic-like [Benincasa hispida]8.7e-4084.96Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS---HHKESEPEKPPVFKKWQHPAAPFH
        MADS RRTS   AS RH  QPSRLQRRAPASLQINRSDW VAIPLLSPLVSPSSP DIQN T DS   SSSSS   HHKESEPEKPPVFKKWQHPAAPFH
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS---HHKESEPEKPPVFKKWQHPAAPFH

Query:  YDSGPRAPRFVPV
        YDSGPRAPRFVPV
Subjt:  YDSGPRAPRFVPV

TrEMBL top hitse value%identityAlignment
A0A1S3CDB1 uncharacterized protein At4g14450, chloroplastic-like3.1e-3570.54Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-------------------HHKESEPE
        MADS RRTS T  + RH  QPSRLQRRAPASLQINRSDW VAIPLLSPLVSPSSP DIQN T DS   SS+SS                   HHKE E E
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-------------------HHKESEPE

Query:  KPPVFKKWQHPAAPFHYDSGPRAPRFVPV
        K PVFKKWQHPAAPFHYDSGPRAPRFVPV
Subjt:  KPPVFKKWQHPAAPFHYDSGPRAPRFVPV

A0A6J1CA35 uncharacterized protein At4g14450, chloroplastic-like1.2e-2974.11Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKP--PVFKKWQHPAAPFHY
        MAD+QRRTS   A  R Q QPSRLQRRAPASLQI+RSDW VAIPLLSPLVSPSSP +IQN    S   S+SS   + S+PEKP  PV KKWQHPAAPFHY
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKP--PVFKKWQHPAAPFHY

Query:  DSGPRAPRFVPV
        DSGPRAPRFVPV
Subjt:  DSGPRAPRFVPV

A0A6J1ER11 uncharacterized protein At4g14450, chloroplastic-like4.4e-3780.17Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-----HHKESEPEKPPVFKKWQHPAAP
        MA+SQRR S TAA ++   QPSRLQRRAPASLQI+RSDW VAIPLLSPLVSPSSP +IQN T DSGS SSSSS     HHKESEPEKPPVFKKWQHPAAP
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-----HHKESEPEKPPVFKKWQHPAAP

Query:  FHYDSGPRAPR-FVPV
        FHYDSG RAPR FVPV
Subjt:  FHYDSGPRAPR-FVPV

A0A6J1H320 uncharacterized protein At4g14450, chloroplastic-like3.2e-3272.57Show/hide
Query:  MADSQRRTSATA-ASRRH---QHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPF
        MADS RRTS  A ASRRH   Q QP   + RAPASLQINR DW VAIPLL+PLVSPSSP +IQ    +SG  SS+SS+HKESEPEKPPVFKKWQHPAAPF
Subjt:  MADSQRRTSATA-ASRRH---QHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGPRAPRFVP
         YDSGP  PRF+P
Subjt:  HYDSGPRAPRFVP

A0A6J1KKB8 uncharacterized protein At4g14450, chloroplastic-like2.2e-3677.97Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-------HHKESEPEKPPVFKKWQHPA
        MA+SQRR S  AA ++   QPSRLQRRAPASLQI+RSDW VAIPLLSPLVSPSSP +IQN T DSGS SSSSS       HHKESEPEKPPVFKKWQHPA
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSS-------HHKESEPEKPPVFKKWQHPA

Query:  APFHYDSGPRAPR-FVPV
        APFHYDSG RAPR FVPV
Subjt:  APFHYDSGPRAPR-FVPV

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic8.8e-1143.75Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASL--QINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPFHY
        MA + +RTS++AAS  ++ Q S+LQRRAP+ +    + S+WNVAIPLLSPL +PS  +      +      + +    E E +K PVFKKWQHPA+PF Y
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASL--QINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPFHY

Query:  DSGPRAPRFVPV
        +     P F+ V
Subjt:  DSGPRAPRFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein8.2e-1245.92Show/hide
Query:  TSATAASRRHQHQPSRLQRRAPASLQIN--RSDWNVAIPLLSPLVS-PSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPFHYDSGP
        ++A   S     + SRLQRRAP  L+IN   ++W VAIPLLSP  S P  P  +  R                 E EKPPVFKKWQHPAAPF+Y   P
Subjt:  TSATAASRRHQHQPSRLQRRAPASLQIN--RSDWNVAIPLLSPLVS-PSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPFHYDSGP

AT3G23170.1 unknown protein1.4e-1137.72Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQI----NRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPF
        M+ + +R   ++ S   + QPSRL +R PA   +      ++WN AIPLLSPL      + +    ++   +++ +        EK PVFKKWQHPAAPF
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASLQI----NRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPF

Query:  HYDSGPRAPRFVPV
        +Y+S    P FVPV
Subjt:  HYDSGPRAPRFVPV

AT4G14450.1 unknown protein6.3e-1243.75Show/hide
Query:  MADSQRRTSATAASRRHQHQPSRLQRRAPASL--QINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPFHY
        MA + +RTS++AAS  ++ Q S+LQRRAP+ +    + S+WNVAIPLLSPL +PS  +      +      + +    E E +K PVFKKWQHPA+PF Y
Subjt:  MADSQRRTSATAASRRHQHQPSRLQRRAPASL--QINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPFHY

Query:  DSGPRAPRFVPV
        +     P F+ V
Subjt:  DSGPRAPRFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATTCACAGAGACGAACCTCCGCCACCGCCGCTTCACGCCGCCACCAACACCAACCCAGCCGTCTCCAGCGTCGGGCTCCGGCCTCTCTCCAAATCAACCGCTC
CGATTGGAACGTCGCCATCCCTCTCTTATCGCCACTCGTCTCTCCATCCTCGCCCAACGACATCCAAAATCGAACGCTCGATTCAGGATCCACTTCTTCTTCTTCCTCTC
ACCATAAAGAATCGGAGCCGGAGAAGCCACCGGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCCTTTCACTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTT
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATTCACAGAGACGAACCTCCGCCACCGCCGCTTCACGCCGCCACCAACACCAACCCAGCCGTCTCCAGCGTCGGGCTCCGGCCTCTCTCCAAATCAACCGCTC
CGATTGGAACGTCGCCATCCCTCTCTTATCGCCACTCGTCTCTCCATCCTCGCCCAACGACATCCAAAATCGAACGCTCGATTCAGGATCCACTTCTTCTTCTTCCTCTC
ACCATAAAGAATCGGAGCCGGAGAAGCCACCGGTTTTTAAGAAATGGCAGCATCCGGCGGCGCCCTTTCACTACGATTCCGGTCCTAGGGCTCCCAGATTCGTACCCGTT
TAG
Protein sequenceShow/hide protein sequence
MADSQRRTSATAASRRHQHQPSRLQRRAPASLQINRSDWNVAIPLLSPLVSPSSPNDIQNRTLDSGSTSSSSSHHKESEPEKPPVFKKWQHPAAPFHYDSGPRAPRFVPV