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Lag0016570 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016570
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr12:39112038..39112481
RNA-Seq ExpressionLag0016570
SyntenyLag0016570
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593852.1 Transcriptional regulator TAC1, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4969.43Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP
        MDSEKLGSSSESSS+EQSD + ED SDS   KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV SF   + SKQI+          +P L  S+ 
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP

Query:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP
        +Y  SGSNP GYFQELG+LNMN WG+DLSL+I PSK R  +W+G+G+DLELRLGH P
Subjt:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP

XP_022930490.1 probable transcriptional regulator RABBIT EARS [Cucurbita moschata]7.3e-5069.43Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP
        MDSEKLGSSSESSS EQSD + ED SDS   KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ SF   + SKQI+          +P L  S+ 
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP

Query:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP
        +Y  SGSNP GYFQELG+LNMN WG+DLSL+I PSK RR +W+G+G+DLELRLGH P
Subjt:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP

XP_023000554.1 zinc finger protein GIS-like [Cucurbita maxima]3.1e-4867.74Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSY--------SLLSKQIDQPTLARSRPNY
        MDSEKL SSSESSS+EQSD + ED SDS   KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ SF          + +S    +P L  S+ +Y
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSY--------SLLSKQIDQPTLARSRPNY

Query:  RASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP
         ASGSNP GYFQ  G LNMNLWG DLSL+I PSK RR +W+G+G+DLELRLGH P
Subjt:  RASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP

XP_023514446.1 probable transcriptional regulator RABBIT EARS [Cucurbita pepo subsp. pepo]8.6e-5170.7Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP
        MDSEKLGSSSESSS+EQSD + ED SDS   KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV SF   + SKQI+          +P L  S+ 
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP

Query:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP
        +Y  SGSNP GYFQELG+LNMNLWG DLSL+I PSK RR +W+G+G+DLELRLGH P
Subjt:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP

XP_038875027.1 zinc finger protein 6-like [Benincasa hispida]6.4e-4667.47Show/hide
Query:  MDS-EKLGSS-SESSSD-EQSDPIKE-DYSDSLTN---KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPT---------
        MDS +KLGSS SESSS+ EQS+ +KE DYSDS TN   KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  ++ S S SL S QI  P+         
Subjt:  MDS-EKLGSS-SESSSD-EQSDPIKE-DYSDSLTN---KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPT---------

Query:  ---LARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP
           L RS+ NY+AS SN HGYFQ+LG+ NMNLWGSDLSLQIGP+  RR +WNGDGVDLELRLGH P
Subjt:  ---LARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP

TrEMBL top hitse value%identityAlignment
A0A0A0LI91 C2H2-type domain-containing protein1.2e-2950.83Show/hide
Query:  MDSE---KLGSSSESSSDEQSDPI----KED-------YSDSLTN---KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVP-SFSYSLLSKQIDQ
        MDS+   ++ + S+SSSD+Q + +    KED       YSD+  +   KRSY CIFCKRGFTNAQALGGHMNIHRKDR NK  +   SFS S  S  +  
Subjt:  MDSE---KLGSSSESSSDEQSDPI----KED-------YSDSLTN---KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVP-SFSYSLLSKQIDQ

Query:  -----------------PTLARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIW-NGDGVDLELRLGH
                         P L  S+ NY+AS SN HG        NMNLWGSDLSLQIG +  RR +W NGDGVDLELRLGH
Subjt:  -----------------PTLARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIW-NGDGVDLELRLGH

A0A1J7I3B7 C2H2-type domain-containing protein1.7e-2045.98Show/hide
Query:  GSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ---------VPSF------SYSLLSKQ--IDQPTLARSR
        G SSE+S+ E++D  KED  DS+T+KRSY C FCKRGFTNAQALGGHMNIHRKD+A KAKQ          PSF       YS+   Q   D      + 
Subjt:  GSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ---------VPSF------SYSLLSKQ--IDQPTLARSR

Query:  PNYRASGSNPHGY-----------FQELGELNMNLWGSDLSLQIGPS-----KERRPIWNGDGVDLELRLGHDP
        PNY    +NP  Y           ++ +G     L GS+LSLQI  S     + R+ I N + VDLELRL H P
Subjt:  PNYRASGSNPHGY-----------FQELGELNMNLWGSDLSLQIGPS-----KERRPIWNGDGVDLELRLGHDP

A0A6J1CE07 transcriptional regulator TAC1-like1.1e-4064.29Show/hide
Query:  MDSEK-LGSSSESSSDEQSDP--IKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV--PSFSYS----LLSKQIDQPT------L
        MDSEK LGSSS+SSS+EQ     IK D    LTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANK KQ+   S SYS    + SKQI+          
Subjt:  MDSEK-LGSSSESSSDEQSDP--IKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQV--PSFSYS----LLSKQIDQPT------L

Query:  ARSRPNYRASGSNPHGYFQELGELN--MNLWGSDLSLQIGPSK---ERRPIW--NGDGVDLELRLGHD
         R R ++  SGSNP GYFQELG+LN    LWGSDLSLQI PSK    R  IW  NG+G+DLELRLGHD
Subjt:  ARSRPNYRASGSNPHGYFQELGELN--MNLWGSDLSLQIGPSK---ERRPIW--NGDGVDLELRLGHD

A0A6J1EX07 probable transcriptional regulator RABBIT EARS3.5e-5069.43Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP
        MDSEKLGSSSESSS EQSD + ED SDS   KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ SF   + SKQI+          +P L  S+ 
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQID----------QPTLARSRP

Query:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP
        +Y  SGSNP GYFQELG+LNMN WG+DLSL+I PSK RR +W+G+G+DLELRLGH P
Subjt:  NYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP

A0A6J1KKB3 zinc finger protein GIS-like1.5e-4867.74Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSY--------SLLSKQIDQPTLARSRPNY
        MDSEKL SSSESSS+EQSD + ED SDS   KRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQ+ SF          + +S    +P L  S+ +Y
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSY--------SLLSKQIDQPTLARSRPNY

Query:  RASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP
         ASGSNP GYFQ  G LNMNLWG DLSL+I PSK RR +W+G+G+DLELRLGH P
Subjt:  RASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.6e-0740.79Show/hide
Query:  SSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPT
        S++ SS E+    ++D + SL   RSY C FC+R F +AQALGGHMN+HR+DRA   +    + +   S   + P+
Subjt:  SSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPT

Q38895 Transcriptional regulator SUPERMAN2.5e-0836.89Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQP-----TLARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKE
        RSY C FCKR F +AQALGGHMN+HR+DRA    Q    S S  S     P     T+A S P +     +P   F  L   +   + + L   + P  +
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQP-----TLARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQIGPSKE

Query:  RRP
          P
Subjt:  RRP

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.0e-0653.85Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPT
        RSY C FC R F +AQALGGHMN+HR+DRA   +Q      SL     DQ T
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPT

Q9SLB8 Zinc finger protein 111.1e-0845.45Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSN
        ++Y C FC+R F +AQALGGHMN+HR+DRA K +Q+PS+    L +      +A   PN+ +S S+
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSN

Q9SR34 Transcriptional regulator TAC11.1e-0853.23Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA
        M++ K   +++  SD  S    +   DSL   RSY C FC RGF+NAQALGGHMNIHR+DRA
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA

Arabidopsis top hitse value%identityAlignment
AT2G42410.1 zinc finger protein 117.9e-1045.45Show/hide
Query:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSN
        ++Y C FC+R F +AQALGGHMN+HR+DRA K +Q+PS+    L +      +A   PN+ +S S+
Subjt:  RSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSN

AT3G09290.1 telomerase activator17.9e-1053.23Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA
        M++ K   +++  SD  S    +   DSL   RSY C FC RGF+NAQALGGHMNIHR+DRA
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRA

AT3G23140.1 C2H2 and C2HC zinc fingers superfamily protein7.9e-1046.15Show/hide
Query:  SDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSNPHGYF
        S S  N+R+Y C  CKRGFTN QALGGH NIHR++R    ++ PS S S  S     P  ++S P+   + +NP  YF
Subjt:  SDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSNPHGYF

AT3G53820.1 C2H2 and C2HC zinc fingers superfamily protein9.3e-1135.56Show/hide
Query:  KEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQ
        +  YS S +  R Y C FC+RGF+NAQALGGHMNIHRKDRA K +Q      +L  +  +      SR  +         +   +G       G D   +
Subjt:  KEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSNPHGYFQELGELNMNLWGSDLSLQ

Query:  IGPSKERRP---------IWNGDGVDLELRLGHDP
         G   E +            + D +DLELRLG DP
Subjt:  IGPSKERRP---------IWNGDGVDLELRLGHDP

AT5G43540.1 C2H2 and C2HC zinc fingers superfamily protein2.0e-1335.81Show/hide
Query:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSNPH
        M+ E+  SS+ S +           S S   +R Y C FCKRGFTNAQALGGHMNIHR+DR NKAK              +   +A S+ +     ++  
Subjt:  MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSNPH

Query:  GYFQELGELNMNLWGSDL--SLQIGPSKERRP--IWNGDGVDLELRLG
        G ++++  + +    S+    L+IG    RR   +  G+ +DLELRLG
Subjt:  GYFQELGELNMNLWGSDL--SLQIGPSKERRP--IWNGDGVDLELRLG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTCTGAAAAACTAGGAAGCAGCTCAGAGAGTTCGAGCGATGAACAATCCGATCCAATCAAGGAAGATTATTCAGATTCTTTGACCAATAAACGTTCTTATGGCTG
CATATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCTCTTGGAGGCCACATGAACATCCATAGAAAAGATCGAGCCAACAAAGCCAAACAAGTCCCCTCTTTTTCTTATT
CTCTTCTGAGCAAGCAAATTGACCAACCCACCTTGGCTAGGTCTCGGCCGAATTATCGAGCCTCGGGTTCGAACCCACATGGTTACTTCCAAGAACTTGGCGAGTTGAAT
ATGAACCTTTGGGGGTCAGATTTGAGCCTTCAAATTGGACCAAGCAAGGAAAGGAGACCAATTTGGAATGGCGATGGAGTTGATTTGGAGCTTCGACTTGGCCATGATCC
GTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTCTGAAAAACTAGGAAGCAGCTCAGAGAGTTCGAGCGATGAACAATCCGATCCAATCAAGGAAGATTATTCAGATTCTTTGACCAATAAACGTTCTTATGGCTG
CATATTTTGCAAGCGTGGGTTCACCAACGCTCAAGCTCTTGGAGGCCACATGAACATCCATAGAAAAGATCGAGCCAACAAAGCCAAACAAGTCCCCTCTTTTTCTTATT
CTCTTCTGAGCAAGCAAATTGACCAACCCACCTTGGCTAGGTCTCGGCCGAATTATCGAGCCTCGGGTTCGAACCCACATGGTTACTTCCAAGAACTTGGCGAGTTGAAT
ATGAACCTTTGGGGGTCAGATTTGAGCCTTCAAATTGGACCAAGCAAGGAAAGGAGACCAATTTGGAATGGCGATGGAGTTGATTTGGAGCTTCGACTTGGCCATGATCC
GTAA
Protein sequenceShow/hide protein sequence
MDSEKLGSSSESSSDEQSDPIKEDYSDSLTNKRSYGCIFCKRGFTNAQALGGHMNIHRKDRANKAKQVPSFSYSLLSKQIDQPTLARSRPNYRASGSNPHGYFQELGELN
MNLWGSDLSLQIGPSKERRPIWNGDGVDLELRLGHDP