; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lag0016572 (gene) of Sponge gourd (AG-4) v1 genome

Gene IDLag0016572
OrganismLuffa acutangula AG-4 (Sponge gourd (AG-4) v1)
DescriptionC2H2-type domain-containing protein
Genome locationchr12:39116481..39116975
RNA-Seq ExpressionLag0016572
SyntenyLag0016572
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6593853.1 Transcriptional regulator SUPERMAN, partial [Cucurbita argyrosperma subsp. sororia]4.2e-4666.08Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN------IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPL
        MES SL+M SPQE+LR+ +              K NNTRGD ++EE       +GF W SS AY+C FCKR+FRSAQALGGHMNVHRRDRAKL RRSPPL
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN------IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPL

Query:  DSTHHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF
        DS H    FHGSSSQPIKFLKLYDFSS +  GEEE+DG CKIWK VKKFV KE   L  SNEIDLELRLGF
Subjt:  DSTHHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF

XP_008465205.1 PREDICTED: transcriptional regulator SUPERMAN [Cucumis melo]4.0e-4970.73Show/hide
Query:  EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN-----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST---HHGHDF
        +ELRII+  KMKPQ KAKAS KH+N R G QE+EE      + F W SS AYTC FCKRQF+SAQALGGHMNVHRRDRAKL RRS PLDS     H HDF
Subjt:  EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN-----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST---HHGHDF

Query:  HGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLSGSNEIDLELRLGF
         GSSSQPIKFLKLYDFSSF+    +++SDGGCKIWKKV KFV  KET LL+ SN+IDLELRLGF
Subjt:  HGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLSGSNEIDLELRLGF

XP_011650145.1 zinc finger protein 3 [Cucumis sativus]2.1e-5067.96Show/hide
Query:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN----IGFLWLSSGA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR
        MESN+   + MS      +ELRII+  KMKPQ KAKAS KHNN R G+QE+EE     + F W SS A YTC FCKRQF+SAQALGGHMNVHRRDRAKL 
Subjt:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN----IGFLWLSSGA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR

Query:  RRSPPLDST---HHGHDFHGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF
        RRS PLDS     H HDFHGSSSQPIKFLKLYDFSSF+    +++SDGGC+IWKKV KFV KET LL+ SN+IDLELRLGF
Subjt:  RRSPPLDST---HHGHDFHGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF

XP_023514445.1 zinc finger protein 4-like [Cucurbita pepo subsp. pepo]3.2e-4667.46Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDS
        MES SL+M SPQE+LRI +              K NNTRGD ++EE     +GF W SS AY+C FCKRQFRSAQALGGHMNVHRRDRAKL RRSPPL S
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDS

Query:  THHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF
         H    FHGSSSQPIKFLKLYDFSS    GEEE+DG CKIWK VKKFV KE   L  SNEIDLELRLGF
Subjt:  THHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF

XP_038875029.1 transcriptional regulator TAC1-like [Benincasa hispida]1.1e-5475.78Show/hide
Query:  SPQEELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN---IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDS-THHGHDFH
        SPQEELRII+ SKMKPQP AKAS K+N+TR  +QE+EE    +GF W SS AYTC FCKR+F+SAQALGGHMNVHRRDRAKL RR+P LDS TH  HDFH
Subjt:  SPQEELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN---IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDS-THHGHDFH

Query:  GSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF
        GSSSQPIKFLKLYDFSSF +G E+ESDGGCKIWKKV KFV  E  LLS SN+IDLEL+LGF
Subjt:  GSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF

TrEMBL top hitse value%identityAlignment
A0A0A0LNQ1 C2H2-type domain-containing protein1.0e-5067.96Show/hide
Query:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN----IGFLWLSSGA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR
        MESN+   + MS      +ELRII+  KMKPQ KAKAS KHNN R G+QE+EE     + F W SS A YTC FCKRQF+SAQALGGHMNVHRRDRAKL 
Subjt:  MESNS---LRMSPQ----EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN----IGFLWLSSGA-YTCSFCKRQFRSAQALGGHMNVHRRDRAKLR

Query:  RRSPPLDST---HHGHDFHGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF
        RRS PLDS     H HDFHGSSSQPIKFLKLYDFSSF+    +++SDGGC+IWKKV KFV KET LL+ SN+IDLELRLGF
Subjt:  RRSPPLDST---HHGHDFHGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF

A0A1S3CPU8 transcriptional regulator SUPERMAN2.0e-4970.73Show/hide
Query:  EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN-----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST---HHGHDF
        +ELRII+  KMKPQ KAKAS KH+N R G QE+EE      + F W SS AYTC FCKRQF+SAQALGGHMNVHRRDRAKL RRS PLDS     H HDF
Subjt:  EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN-----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST---HHGHDF

Query:  HGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLSGSNEIDLELRLGF
         GSSSQPIKFLKLYDFSSF+    +++SDGGCKIWKKV KFV  KET LL+ SN+IDLELRLGF
Subjt:  HGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLSGSNEIDLELRLGF

A0A5D3CAK0 Transcriptional regulator SUPERMAN2.0e-4970.73Show/hide
Query:  EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN-----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST---HHGHDF
        +ELRII+  KMKPQ KAKAS KH+N R G QE+EE      + F W SS AYTC FCKRQF+SAQALGGHMNVHRRDRAKL RRS PLDS     H HDF
Subjt:  EELRIISNSKMKPQPKAKASFKHNNTR-GDQEQEEN-----IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST---HHGHDF

Query:  HGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLSGSNEIDLELRLGF
         GSSSQPIKFLKLYDFSSF+    +++SDGGCKIWKKV KFV  KET LL+ SN+IDLELRLGF
Subjt:  HGSSSQPIKFLKLYDFSSFN-NGGEEESDGGCKIWKKVKKFV-NKETGLLSGSNEIDLELRLGF

A0A6J1EUL3 zinc finger protein 10-like3.4e-4666.08Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN------IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPL
        MES SL+M SPQE+LR+ +              K NNTRGD ++EE       +GF W SS AY+C FCKR+FRSAQALGGHMNVHRRDRAKL RRSPPL
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN------IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPL

Query:  DSTHHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF
        DS H    FHGSSSQPIKFLKLYDFSS +  GEEE+DG CKIWK VKKFV KE   L  SNEIDLELRLGF
Subjt:  DSTHHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF

A0A6J1KIV9 transcriptional regulator SUPERMAN-like5.0e-4565.5Show/hide
Query:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN------IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPL
        ME+ SL+M SPQEELRI +  K              NTRGD ++EE       +GF W SS AY+C FCKR+FRSAQALGGHMNVHRRDRAKL RRSPPL
Subjt:  MESNSLRM-SPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEEN------IGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPL

Query:  DSTHHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF
         S H    FHGSSSQPIKFLKLYDFSS +  GEEE DG CKIWK VKKFV KE   L  SNEIDLELRLGF
Subjt:  DSTHHGHDFHGSSSQPIKFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF

SwissProt top hitse value%identityAlignment
O80942 Zinc finger protein 103.8e-1063.04Show/hide
Query:  QEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR
        +++  G LW    +YTCSFC+R+F+SAQALGGHMNVHRRDRA+L++
Subjt:  QEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR

Q38895 Transcriptional regulator SUPERMAN1.4e-1262.5Show/hide
Query:  QEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST
        Q+ +  +GF W    +YTCSFCKR+FRSAQALGGHMNVHRRDRA+LR +  P  S+
Subjt:  QEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST

Q9LHS9 Probable transcriptional regulator RABBIT EARS1.9e-0961.22Show/hide
Query:  GFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST
        G +W    +Y+CSFC R+F+SAQALGGHMNVHRRDRA+L+++S    ST
Subjt:  GFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST

Q9SLB8 Zinc finger protein 114.5e-1176.19Show/hide
Query:  YTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDSTHH
        YTCSFC+R+FRSAQALGGHMNVHRRDRAKLR+    L   HH
Subjt:  YTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDSTHH

Q9SR34 Transcriptional regulator TAC14.7e-0872.22Show/hide
Query:  SGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRR
        S +Y CSFC R F +AQALGGHMN+HRRDRAKLR++
Subjt:  SGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRR

Arabidopsis top hitse value%identityAlignment
AT2G37740.1 zinc-finger protein 102.7e-1163.04Show/hide
Query:  QEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR
        +++  G LW    +YTCSFC+R+F+SAQALGGHMNVHRRDRA+L++
Subjt:  QEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRR

AT2G42410.1 zinc finger protein 113.2e-1276.19Show/hide
Query:  YTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDSTHH
        YTCSFC+R+FRSAQALGGHMNVHRRDRAKLR+    L   HH
Subjt:  YTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDSTHH

AT3G23130.1 C2H2 and C2HC zinc fingers superfamily protein1.0e-1362.5Show/hide
Query:  QEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST
        Q+ +  +GF W    +YTCSFCKR+FRSAQALGGHMNVHRRDRA+LR +  P  S+
Subjt:  QEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST

AT4G17810.1 C2H2 and C2HC zinc fingers superfamily protein1.8e-1060.42Show/hide
Query:  DQEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR
        +Q+ + NI        +YTC+FC+R+FRSAQALGGHMNVHRRDRA  R
Subjt:  DQEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLR

AT5G06070.1 C2H2 and C2HC zinc fingers superfamily protein1.4e-1061.22Show/hide
Query:  GFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST
        G +W    +Y+CSFC R+F+SAQALGGHMNVHRRDRA+L+++S    ST
Subjt:  GFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGCAATAGCTTGAGGATGAGCCCACAAGAAGAGCTTAGAATTATAAGCAACTCCAAGATGAAGCCACAACCCAAAGCTAAAGCCTCATTCAAACATAACAACAC
AAGAGGAGATCAAGAACAAGAAGAAAACATTGGATTTCTATGGCTTTCTTCAGGAGCTTACACATGTAGCTTTTGCAAAAGGCAATTTCGATCGGCACAAGCCCTCGGCG
GTCACATGAATGTTCATCGACGAGACCGCGCAAAGCTCAGACGAAGATCTCCTCCATTGGATTCAACTCATCATGGTCATGATTTTCATGGATCTTCATCTCAACCCATT
AAGTTTCTCAAACTGTATGACTTCTCAAGCTTTAATAATGGTGGTGAAGAAGAATCAGATGGTGGGTGTAAGATTTGGAAGAAGGTTAAGAAGTTTGTGAACAAGGAGAC
TGGTTTGCTCAGTGGTTCAAATGAGATAGATTTGGAACTTAGATTAGGGTTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGCAATAGCTTGAGGATGAGCCCACAAGAAGAGCTTAGAATTATAAGCAACTCCAAGATGAAGCCACAACCCAAAGCTAAAGCCTCATTCAAACATAACAACAC
AAGAGGAGATCAAGAACAAGAAGAAAACATTGGATTTCTATGGCTTTCTTCAGGAGCTTACACATGTAGCTTTTGCAAAAGGCAATTTCGATCGGCACAAGCCCTCGGCG
GTCACATGAATGTTCATCGACGAGACCGCGCAAAGCTCAGACGAAGATCTCCTCCATTGGATTCAACTCATCATGGTCATGATTTTCATGGATCTTCATCTCAACCCATT
AAGTTTCTCAAACTGTATGACTTCTCAAGCTTTAATAATGGTGGTGAAGAAGAATCAGATGGTGGGTGTAAGATTTGGAAGAAGGTTAAGAAGTTTGTGAACAAGGAGAC
TGGTTTGCTCAGTGGTTCAAATGAGATAGATTTGGAACTTAGATTAGGGTTTTAG
Protein sequenceShow/hide protein sequence
MESNSLRMSPQEELRIISNSKMKPQPKAKASFKHNNTRGDQEQEENIGFLWLSSGAYTCSFCKRQFRSAQALGGHMNVHRRDRAKLRRRSPPLDSTHHGHDFHGSSSQPI
KFLKLYDFSSFNNGGEEESDGGCKIWKKVKKFVNKETGLLSGSNEIDLELRLGF